RNA–Protein interactions for RNA: ENST00000492545.1

CTDSP1-211, Transcript of CTD small phosphatase 1, humanhuman

TSL 5

Gene CTDSP1, Length 634 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-211ENST00000492545 AKIRIN2Q53H80 203 aa18.45■□□□□ 0.54
CTDSP1-211ENST00000492545 HACD4Q5VWC8 232 aa18.45■□□□□ 0.54
CTDSP1-211ENST00000492545 PYHIN1Q6K0P9 492 aa18.45■□□□□ 0.54
CTDSP1-211ENST00000492545 DCSTAMPQ9H295 470 aa18.45■□□□□ 0.54
CTDSP1-211ENST00000492545 METTL1Q9UBP6 276 aaKnown RBP18.45■□□□□ 0.54
CTDSP1-211ENST00000492545 ZNF230Q9UIE0 474 aaPredicted RBP18.45■□□□□ 0.54
CTDSP1-211ENST00000492545 DAPK2Q9UIK4 370 aa18.45■□□□□ 0.54
CTDSP1-211ENST00000492545 FOXA2Q9Y261 457 aaPredicted RBP18.45■□□□□ 0.54
CTDSP1-211ENST00000492545 NUBP2Q9Y5Y2 271 aa18.45■□□□□ 0.54
CTDSP1-211ENST00000492545 FCN1O00602 326 aa18.44■□□□□ 0.54
CTDSP1-211ENST00000492545 IGKV1-16P04430 117 aa18.44■□□□□ 0.54
CTDSP1-211ENST00000492545 HOXD3P31249 432 aaPredicted RBP18.44■□□□□ 0.54
CTDSP1-211ENST00000492545 DEFB136Q30KP8 78 aa18.44■□□□□ 0.54
CTDSP1-211ENST00000492545 C19orf54Q5BKX5 351 aa18.44■□□□□ 0.54
CTDSP1-211ENST00000492545 SFXN4Q6P4A7 337 aa18.44■□□□□ 0.54
CTDSP1-211ENST00000492545 OR2D2Q9H210 308 aa18.44■□□□□ 0.54
CTDSP1-211ENST00000492545 SLC35D1Q9NTN3 355 aa18.44■□□□□ 0.54
CTDSP1-211ENST00000492545 SDHAF2Q9NX18 166 aa18.44■□□□□ 0.54
CTDSP1-211ENST00000492545 RRP15Q9Y3B9 282 aaKnown RBP18.44■□□□□ 0.54
CTDSP1-211ENST00000492545 RBM7Q9Y580 266 aaKnown RBP18.44■□□□□ 0.54
CTDSP1-211ENST00000492545 TMEM127O75204 238 aa18.43■□□□□ 0.54
CTDSP1-211ENST00000492545 RRASP10301 218 aa18.43■□□□□ 0.54
CTDSP1-211ENST00000492545 CD40LGP29965 261 aa18.43■□□□□ 0.54
CTDSP1-211ENST00000492545 SDC2P34741 201 aa18.43■□□□□ 0.54
CTDSP1-211ENST00000492545 NDPQ00604 133 aa18.43■□□□□ 0.54
CTDSP1-211ENST00000492545 CBX3Q13185 183 aa18.43■□□□□ 0.54
CTDSP1-211ENST00000492545 DCTN2Q13561 401 aaKnown RBP18.43■□□□□ 0.54
CTDSP1-211ENST00000492545 OR11H1Q8NG94 326 aa18.43■□□□□ 0.54
CTDSP1-211ENST00000492545 ADTRPQ96IZ2 230 aa18.43■□□□□ 0.54
CTDSP1-211ENST00000492545 OR51E2Q9H255 320 aa18.43■□□□□ 0.54
CTDSP1-211ENST00000492545 SMIM30A4D0T7 59 aa18.42■□□□□ 0.54
CTDSP1-211ENST00000492545 I3L521 148 aa18.42■□□□□ 0.54
CTDSP1-211ENST00000492545 K7EIL1 84 aa18.42■□□□□ 0.54
CTDSP1-211ENST00000492545 RAMP3O60896 148 aa18.42■□□□□ 0.54
CTDSP1-211ENST00000492545 OR8U8P0C7N1 319 aa18.42■□□□□ 0.54
CTDSP1-211ENST00000492545 ECSCRQ19T08 205 aa18.42■□□□□ 0.54
CTDSP1-211ENST00000492545 C9orf66Q5T8R8 295 aa18.42■□□□□ 0.54
CTDSP1-211ENST00000492545 PPP1R27Q86WC6 154 aa18.42■□□□□ 0.54
CTDSP1-211ENST00000492545 H1FOOQ8IZA3 346 aaPredicted RBP18.42■□□□□ 0.54
CTDSP1-211ENST00000492545 OR1N2Q8NGR9 330 aa18.42■□□□□ 0.54
CTDSP1-211ENST00000492545 ABHD5Q8WTS1 349 aa18.42■□□□□ 0.54
CTDSP1-211ENST00000492545 A0A1W2PN81 502 aa18.41■□□□□ 0.54
CTDSP1-211ENST00000492545 EGR2P11161 476 aaPredicted RBP18.41■□□□□ 0.54
CTDSP1-211ENST00000492545 CHRNA7P36544 502 aa18.41■□□□□ 0.54
CTDSP1-211ENST00000492545 LINC00205P59089 165 aa18.41■□□□□ 0.54
CTDSP1-211ENST00000492545 DGCR2P98153 550 aa18.41■□□□□ 0.54
CTDSP1-211ENST00000492545 RTL8BQ17RB0 113 aa18.41■□□□□ 0.54
CTDSP1-211ENST00000492545 MAFIPQ8WZ33 124 aa18.41■□□□□ 0.54
CTDSP1-211ENST00000492545 FBXO7Q9Y3I1 522 aa18.41■□□□□ 0.54
CTDSP1-211ENST00000492545 ETV7Q9Y603 341 aa18.41■□□□□ 0.54
CTDSP1-211ENST00000492545 CD36P16671 472 aa18.4■□□□□ 0.54
CTDSP1-211ENST00000492545 ZNF616Q08AN1 781 aa18.4■□□□□ 0.54
CTDSP1-211ENST00000492545 ACTBL2Q562R1 376 aa18.4■□□□□ 0.54
CTDSP1-211ENST00000492545 CLCC1Q96S66 551 aa18.4■□□□□ 0.54
CTDSP1-211ENST00000492545 ST6GALNAC5Q9BVH7 336 aa18.4■□□□□ 0.54
CTDSP1-211ENST00000492545 GNB4Q9HAV0 340 aa18.4■□□□□ 0.54
CTDSP1-211ENST00000492545 WI2-2373I1.2A0A1W2PRP0 233 aa18.39■□□□□ 0.53
CTDSP1-211ENST00000492545 SLC25A17O43808 307 aa18.39■□□□□ 0.53
CTDSP1-211ENST00000492545 SOX15O60248 233 aa18.39■□□□□ 0.53
CTDSP1-211ENST00000492545 SLC22A5O76082 557 aa18.39■□□□□ 0.53
CTDSP1-211ENST00000492545 CA2P00918 260 aa18.39■□□□□ 0.53
CTDSP1-211ENST00000492545 SNRPBP14678 240 aaKnown RBP18.39■□□□□ 0.53
CTDSP1-211ENST00000492545 NEDD8Q15843 81 aa18.39■□□□□ 0.53
CTDSP1-211ENST00000492545 TIMM50Q3ZCQ8 353 aa18.39■□□□□ 0.53
CTDSP1-211ENST00000492545 UNQ5815/PRO19632Q6UWF5 114 aa18.39■□□□□ 0.53
CTDSP1-211ENST00000492545 LGALS14Q8TCE9 139 aa18.39■□□□□ 0.53
CTDSP1-211ENST00000492545 ARPC1AQ92747 370 aa18.39■□□□□ 0.53
CTDSP1-211ENST00000492545 SLA2Q9H6Q3 261 aa18.39■□□□□ 0.53
CTDSP1-211ENST00000492545 RHBDL2Q9NX52 303 aa18.39■□□□□ 0.53
CTDSP1-211ENST00000492545 A3GALT2U3KPV4 340 aa18.39■□□□□ 0.53
CTDSP1-211ENST00000492545 A0A0A6YYH2 397 aa18.38■□□□□ 0.53
CTDSP1-211ENST00000492545 LOC100506127A0A0U1RQW1 187 aa18.38■□□□□ 0.53
CTDSP1-211ENST00000492545 A6NJ64 397 aa18.38■□□□□ 0.53
CTDSP1-211ENST00000492545 INSL3P51460 131 aa18.38■□□□□ 0.53
CTDSP1-211ENST00000492545 LUMP51884 338 aaPredicted RBP18.38■□□□□ 0.53
CTDSP1-211ENST00000492545 GNG2P59768 71 aa18.38■□□□□ 0.53
CTDSP1-211ENST00000492545 FXYD3Q14802 87 aa18.38■□□□□ 0.53
CTDSP1-211ENST00000492545 ZNF260Q3ZCT1 412 aa18.38■□□□□ 0.53
CTDSP1-211ENST00000492545 TMEM177Q53S58 311 aa18.38■□□□□ 0.53
CTDSP1-211ENST00000492545 DEFB121Q5J5C9 76 aa18.38■□□□□ 0.53
CTDSP1-211ENST00000492545 CNIH2Q6PI25 160 aa18.38■□□□□ 0.53
CTDSP1-211ENST00000492545 LFNGQ8NES3 379 aa18.38■□□□□ 0.53
CTDSP1-211ENST00000492545 TMEM68Q96MH6 324 aa18.38■□□□□ 0.53
CTDSP1-211ENST00000492545 ELF5Q9UKW6 265 aaPredicted RBP18.38■□□□□ 0.53
CTDSP1-211ENST00000492545 IGKV1D-8A0A087WSZ0 117 aa18.37■□□□□ 0.53
CTDSP1-211ENST00000492545 SEC14L6B5MCN3 397 aa18.37■□□□□ 0.53
CTDSP1-211ENST00000492545 MXD1Q05195 221 aa18.37■□□□□ 0.53
CTDSP1-211ENST00000492545 HARBI1Q96MB7 349 aa18.37■□□□□ 0.53
CTDSP1-211ENST00000492545 OR2W1Q9Y3N9 320 aa18.37■□□□□ 0.53
CTDSP1-211ENST00000492545 TMEM235A6NFC5 223 aa18.36■□□□□ 0.53
CTDSP1-211ENST00000492545 ARPC1BO15143 372 aaKnown RBP18.36■□□□□ 0.53
CTDSP1-211ENST00000492545 SHOXO15266 292 aa18.36■□□□□ 0.53
CTDSP1-211ENST00000492545 CNIH1O95406 144 aa18.36■□□□□ 0.53
CTDSP1-211ENST00000492545 IGLV2-23P01705 113 aa18.36■□□□□ 0.53
CTDSP1-211ENST00000492545 CRYGBP07316 175 aa18.36■□□□□ 0.53
CTDSP1-211ENST00000492545 DUTP33316 252 aaKnown RBP18.36■□□□□ 0.53
CTDSP1-211ENST00000492545 GNB1P62873 340 aa18.36■□□□□ 0.53
CTDSP1-211ENST00000492545 CROCCP3Q8IVE0 287 aa18.36■□□□□ 0.53
CTDSP1-211ENST00000492545 BVESQ8NE79 360 aa18.36■□□□□ 0.53
CTDSP1-211ENST00000492545 FAM103A1Q9BTL3 118 aaKnown RBP18.36■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms