RNA–Protein interactions for RNA: ENST00000488908.1

CCDC93-209, Transcript of coiled-coil domain containing 93, humanhuman

TSL 5

Gene CCDC93, Length 268 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC93-209ENST00000488908 OR1L8Q8NGR8 309 aa0.02□□□□□ -2.41
CCDC93-209ENST00000488908 AGR3Q8TD06 166 aa0.02□□□□□ -2.41
CCDC93-209ENST00000488908 CIDECQ96AQ7 238 aaPredicted RBP0.02□□□□□ -2.41
CCDC93-209ENST00000488908 TAMM41Q96BW9 452 aa0.02□□□□□ -2.41
CCDC93-209ENST00000488908 EIF5A2Q9GZV4 153 aaKnown RBP0.02□□□□□ -2.41
CCDC93-209ENST00000488908 TRABDQ9H4I3 376 aa0.02□□□□□ -2.41
CCDC93-209ENST00000488908 ALPK2Q86TB3 2170 aa0.02□□□□□ -2.41
CCDC93-209ENST00000488908 EIF4G1Q04637 1599 aaKnown RBP0.02□□□□□ -2.41
CCDC93-209ENST00000488908 MED12LQ86YW9 2145 aa0.01□□□□□ -2.41
CCDC93-209ENST00000488908 TRIM64CA6NLI5 447 aa0.01□□□□□ -2.41
CCDC93-209ENST00000488908 H0YC42 278 aa0.01□□□□□ -2.41
CCDC93-209ENST00000488908 ATP8B1O43520 1251 aa0.01□□□□□ -2.41
CCDC93-209ENST00000488908 CREBL2O60519 120 aaPredicted RBP0.01□□□□□ -2.41
CCDC93-209ENST00000488908 GABRA2P47869 451 aa0.01□□□□□ -2.41
CCDC93-209ENST00000488908 AQP5P55064 265 aa0.01□□□□□ -2.41
CCDC93-209ENST00000488908 FXYD7P58549 80 aa0.01□□□□□ -2.41
CCDC93-209ENST00000488908 LINC00313P59037 77 aa0.01□□□□□ -2.41
CCDC93-209ENST00000488908 DYNLL1P63167 89 aaKnown RBP0.01□□□□□ -2.41
CCDC93-209ENST00000488908 MIAQ16674 131 aa0.01□□□□□ -2.41
CCDC93-209ENST00000488908 EXOC3L4Q17RC7 722 aa0.01□□□□□ -2.41
CCDC93-209ENST00000488908 NKAIN1Q4KMZ8 207 aa0.01□□□□□ -2.41
CCDC93-209ENST00000488908 TMEM31Q5JXX7 168 aa0.01□□□□□ -2.41
CCDC93-209ENST00000488908 C10orf55Q5SWW7 151 aa0.01□□□□□ -2.41
CCDC93-209ENST00000488908 SBSPONQ8IVN8 264 aa0.01□□□□□ -2.41
CCDC93-209ENST00000488908 ZNF321PQ8N8H1 164 aa0.01□□□□□ -2.41
CCDC93-209ENST00000488908 RPS4Y2Q8TD47 263 aa0.01□□□□□ -2.41
CCDC93-209ENST00000488908 PPWD1Q96BP3 646 aaKnown RBP0.01□□□□□ -2.41
CCDC93-209ENST00000488908 LINC00526Q96FQ7 95 aa0.01□□□□□ -2.41
CCDC93-209ENST00000488908 ACY3Q96HD9 319 aa0.01□□□□□ -2.41
CCDC93-209ENST00000488908 CATSPER2Q96P56 530 aa0.01□□□□□ -2.41
CCDC93-209ENST00000488908 SMR3AQ99954 134 aa0.01□□□□□ -2.41
CCDC93-209ENST00000488908 UGT2B28Q9BY64 529 aa0.01□□□□□ -2.41
CCDC93-209ENST00000488908 REG4Q9BYZ8 158 aa0.01□□□□□ -2.41
CCDC93-209ENST00000488908 OR51B6Q9H340 312 aa0.01□□□□□ -2.41
CCDC93-209ENST00000488908 IFT46Q9NQC8 304 aa0.01□□□□□ -2.41
CCDC93-209ENST00000488908 TTC41PQ6P2S7 1318 aa0.01□□□□□ -2.41
CCDC93-209ENST00000488908 CPAMD8Q8IZJ3 1885 aa0.01□□□□□ -2.41
CCDC93-209ENST00000488908 A0A0D9SEW6 157 aa0□□□□□ -2.41
CCDC93-209ENST00000488908 A0A0J9YW62 118 aa0□□□□□ -2.41
CCDC93-209ENST00000488908 H7C2G1 150 aa0□□□□□ -2.41
CCDC93-209ENST00000488908 GPR171O14626 319 aa0□□□□□ -2.41
CCDC93-209ENST00000488908 UGT2B11O75310 529 aa0□□□□□ -2.41
CCDC93-209ENST00000488908 SNAP29O95721 258 aa0□□□□□ -2.41
CCDC93-209ENST00000488908 AGTR1P30556 359 aa0□□□□□ -2.41
CCDC93-209ENST00000488908 HSPA9P38646 679 aaKnown RBP0□□□□□ -2.41
CCDC93-209ENST00000488908 CRATP43155 626 aa0□□□□□ -2.41
CCDC93-209ENST00000488908 AQP4P55087 323 aa0□□□□□ -2.41
CCDC93-209ENST00000488908 TAS2R20P59543 309 aa0□□□□□ -2.41
CCDC93-209ENST00000488908 TPI1P60174 286 aa0□□□□□ -2.41
CCDC93-209ENST00000488908 DAD1P61803 113 aa0□□□□□ -2.41
CCDC93-209ENST00000488908 AP1S1P61966 158 aa0□□□□□ -2.41
CCDC93-209ENST00000488908 AKR1C1Q04828 323 aa0□□□□□ -2.41
CCDC93-209ENST00000488908 USF2Q15853 346 aaPredicted RBP0□□□□□ -2.41
CCDC93-209ENST00000488908 HNRNPA1L2Q32P51 320 aaKnown RBP0□□□□□ -2.41
CCDC93-209ENST00000488908 C6orf183Q5T699 404 aa0□□□□□ -2.41
CCDC93-209ENST00000488908 TEX36Q5VZQ5 186 aa0□□□□□ -2.41
CCDC93-209ENST00000488908 FAM173BQ6P4H8 233 aa0□□□□□ -2.41
CCDC93-209ENST00000488908 SPATA12Q7Z6I5 190 aa0□□□□□ -2.41
CCDC93-209ENST00000488908 UMODL1-AS1Q8N2C9 162 aa0□□□□□ -2.41
CCDC93-209ENST00000488908 NATD1Q8N6N6 113 aa0□□□□□ -2.41
CCDC93-209ENST00000488908 DAND5Q8N907 189 aa0□□□□□ -2.41
CCDC93-209ENST00000488908 OR13C8Q8NGS7 320 aa0□□□□□ -2.41
CCDC93-209ENST00000488908 MITD1Q8WV92 249 aa0□□□□□ -2.41
CCDC93-209ENST00000488908 TNFAIP8L1Q8WVP5 186 aa0□□□□□ -2.41
CCDC93-209ENST00000488908 OR5P2Q8WZ92 322 aa0□□□□□ -2.41
CCDC93-209ENST00000488908 CPNE2Q96FN4 548 aaPredicted RBP0□□□□□ -2.41
CCDC93-209ENST00000488908 WDR90Q96KV7 1748 aa0□□□□□ -2.41
CCDC93-209ENST00000488908 OR7D2Q96RA2 312 aa0□□□□□ -2.41
CCDC93-209ENST00000488908 SERPINI1Q99574 410 aa0□□□□□ -2.41
CCDC93-209ENST00000488908 HINT2Q9BX68 163 aa0□□□□□ -2.41
CCDC93-209ENST00000488908 SBDSQ9Y3A5 250 aaKnown RBP eCLIP0□□□□□ -2.41
CCDC93-209ENST00000488908 EXPH5Q8NEV8 1989 aa-0.01□□□□□ -2.41
CCDC93-209ENST00000488908 SMARCA4P51532 1647 aa-0.01□□□□□ -2.41
CCDC93-209ENST00000488908 TRAV7A0A075B6U4 112 aa-0.01□□□□□ -2.41
CCDC93-209ENST00000488908 A0A087WX48 190 aa-0.01□□□□□ -2.41
CCDC93-209ENST00000488908 MEIS3P1A6NDR6 274 aa-0.01□□□□□ -2.41
CCDC93-209ENST00000488908 LIN7AO14910 233 aaPredicted RBP-0.01□□□□□ -2.41
CCDC93-209ENST00000488908 PRH1P02810 166 aa-0.01□□□□□ -2.41
CCDC93-209ENST00000488908 NQO2P16083 231 aa-0.01□□□□□ -2.41
CCDC93-209ENST00000488908 CCNOP22674 350 aa-0.01□□□□□ -2.41
CCDC93-209ENST00000488908 OR10J1P30954 320 aa-0.01□□□□□ -2.41
CCDC93-209ENST00000488908 CA5AP35218 305 aa-0.01□□□□□ -2.41
CCDC93-209ENST00000488908 ETV1P50549 477 aa-0.01□□□□□ -2.41
CCDC93-209ENST00000488908 DAPP51397 102 aa-0.01□□□□□ -2.41
CCDC93-209ENST00000488908 ATP5J2P56134 94 aa-0.01□□□□□ -2.41
CCDC93-209ENST00000488908 C1DQ13901 141 aaKnown RBP-0.01□□□□□ -2.41
CCDC93-209ENST00000488908 FLOT2Q14254 428 aa-0.01□□□□□ -2.41
CCDC93-209ENST00000488908 C9orf64Q5T6V5 341 aa-0.01□□□□□ -2.41
CCDC93-209ENST00000488908 SLC22A24Q8N4F4 322 aa-0.01□□□□□ -2.41
CCDC93-209ENST00000488908 ZNF565Q8N9K5 539 aa-0.01□□□□□ -2.41
CCDC93-209ENST00000488908 OR2Y1Q8NGV0 311 aa-0.01□□□□□ -2.41
CCDC93-209ENST00000488908 ZNF675Q8TD23 568 aa-0.01□□□□□ -2.41
CCDC93-209ENST00000488908 MS4A6EQ96DS6 147 aa-0.01□□□□□ -2.41
CCDC93-209ENST00000488908 GNB1LQ9BYB4 327 aa-0.01□□□□□ -2.41
CCDC93-209ENST00000488908 SPRR2GQ9BYE4 73 aa-0.01□□□□□ -2.41
CCDC93-209ENST00000488908 SNX24Q9Y343 169 aa-0.01□□□□□ -2.41
CCDC93-209ENST00000488908 POLR3HQ9Y535 204 aaPredicted RBP-0.01□□□□□ -2.41
CCDC93-209ENST00000488908 GMEB1Q9Y692 573 aa-0.01□□□□□ -2.41
CCDC93-209ENST00000488908 BZW2Q9Y6E2 419 aaKnown RBP-0.01□□□□□ -2.41
CCDC93-209ENST00000488908 EML5Q05BV3 1969 aa-0.01□□□□□ -2.41
Retrieved 100 of 20,778 RNA–protein pairs in 100.4 ms