RNA–Protein interactions for RNA: ENST00000479555.1

CMSS1-204, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

TSL 4

Gene CMSS1, Length 654 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-204ENST00000479555 LHX3Q9UBR4 397 aa3.37□□□□□ -1.87
CMSS1-204ENST00000479555 RABAC1Q9UI14 185 aa3.37□□□□□ -1.87
CMSS1-204ENST00000479555 SLC7A7Q9UM01 511 aa3.37□□□□□ -1.87
CMSS1-204ENST00000479555 RHBDD3Q9Y3P4 386 aa3.37□□□□□ -1.87
CMSS1-204ENST00000479555 LIPGQ9Y5X9 500 aa3.37□□□□□ -1.87
CMSS1-204ENST00000479555 IGLV3-16A0A075B6K0 115 aa3.36□□□□□ -1.87
CMSS1-204ENST00000479555 IGLV5-45A0A087WSX0 123 aa3.36□□□□□ -1.87
CMSS1-204ENST00000479555 TRAV9-2A0A087WT02 112 aa3.36□□□□□ -1.87
CMSS1-204ENST00000479555 A0A0G2JMM0 328 aa3.36□□□□□ -1.87
CMSS1-204ENST00000479555 EDDM13A0A1B0GTR0 161 aa3.36□□□□□ -1.87
CMSS1-204ENST00000479555 A0A1W2PPB8 328 aa3.36□□□□□ -1.87
CMSS1-204ENST00000479555 A0A1W2PPK0 400 aa3.36□□□□□ -1.87
CMSS1-204ENST00000479555 LRP5LA4QPB2 252 aa3.36□□□□□ -1.87
CMSS1-204ENST00000479555 DPRXA6NFQ7 191 aa3.36□□□□□ -1.87
CMSS1-204ENST00000479555 MSGN1A6NI15 193 aa3.36□□□□□ -1.87
CMSS1-204ENST00000479555 KIR3DP1A8MWS1 328 aa3.36□□□□□ -1.87
CMSS1-204ENST00000479555 HHLA1C9JL84 531 aa3.36□□□□□ -1.87
CMSS1-204ENST00000479555 KLRC4-KLRK1H3BQV0 150 aa3.36□□□□□ -1.87
CMSS1-204ENST00000479555 K7EQM0 130 aa3.36□□□□□ -1.87
CMSS1-204ENST00000479555 PIN1P1O15428 100 aa3.36□□□□□ -1.87
CMSS1-204ENST00000479555 RENP00797 406 aa3.36□□□□□ -1.87
CMSS1-204ENST00000479555 IGHV4-39P01824 125 aa3.36□□□□□ -1.87
CMSS1-204ENST00000479555 ISG15P05161 165 aa3.36□□□□□ -1.87
CMSS1-204ENST00000479555 KLK1P06870 262 aa3.36□□□□□ -1.87
CMSS1-204ENST00000479555 LIPFP07098 398 aa3.36□□□□□ -1.87
CMSS1-204ENST00000479555 MRPL3P09001 348 aaKnown RBP3.36□□□□□ -1.87
CMSS1-204ENST00000479555 CT45A6P0DMU7 189 aa3.36□□□□□ -1.87
CMSS1-204ENST00000479555 CT45A5P0DMU8 189 aa3.36□□□□□ -1.87
CMSS1-204ENST00000479555 CT45A7P0DMV0 189 aa3.36□□□□□ -1.87
CMSS1-204ENST00000479555 CCL2P13500 99 aa3.36□□□□□ -1.87
CMSS1-204ENST00000479555 PMCHP20382 165 aa3.36□□□□□ -1.87
CMSS1-204ENST00000479555 LMO2P25791 158 aa3.36□□□□□ -1.87
CMSS1-204ENST00000479555 PSMB5P28074 263 aa3.36□□□□□ -1.87
CMSS1-204ENST00000479555 IL12BP29460 328 aa3.36□□□□□ -1.87
CMSS1-204ENST00000479555 SSTR5P35346 364 aa3.36□□□□□ -1.87
CMSS1-204ENST00000479555 TIMP3P35625 211 aa3.36□□□□□ -1.87
CMSS1-204ENST00000479555 CTRLP40313 264 aa3.36□□□□□ -1.87
CMSS1-204ENST00000479555 GPR6P46095 362 aaPredicted RBP3.36□□□□□ -1.87
CMSS1-204ENST00000479555 RAB9AP51151 201 aa3.36□□□□□ -1.87
CMSS1-204ENST00000479555 ZNF133P52736 654 aaPredicted RBP3.36□□□□□ -1.87
CMSS1-204ENST00000479555 PLP1P60201 277 aa3.36□□□□□ -1.87
CMSS1-204ENST00000479555 POLR2LP62875 67 aaKnown RBP3.36□□□□□ -1.87
CMSS1-204ENST00000479555 RUNX1Q01196 453 aa3.36□□□□□ -1.87
CMSS1-204ENST00000479555 MEF2BQ02080 365 aaPredicted RBP3.36□□□□□ -1.87
CMSS1-204ENST00000479555 HIST1H1AQ02539 215 aaPredicted RBP3.36□□□□□ -1.87
CMSS1-204ENST00000479555 DUSP5Q16690 384 aa3.36□□□□□ -1.87
CMSS1-204ENST00000479555 TMEM249Q2WGJ8 235 aa3.36□□□□□ -1.87
CMSS1-204ENST00000479555 C18orf21Q32NC0 220 aaPredicted RBP3.36□□□□□ -1.87
CMSS1-204ENST00000479555 ABCA11PQ4W5N1 156 aa3.36□□□□□ -1.87
CMSS1-204ENST00000479555 CT45A1Q5HYN5 189 aa3.36□□□□□ -1.87
CMSS1-204ENST00000479555 FFAR4Q5NUL3 377 aa3.36□□□□□ -1.87
CMSS1-204ENST00000479555 FIGLAQ6QHK4 219 aa3.36□□□□□ -1.87
CMSS1-204ENST00000479555 RASL11AQ6T310 242 aa3.36□□□□□ -1.87
CMSS1-204ENST00000479555 PLXDC2Q6UX71 529 aa3.36□□□□□ -1.87
CMSS1-204ENST00000479555 RFLNAQ6ZTI6 216 aa3.36□□□□□ -1.87
CMSS1-204ENST00000479555 ZNF550Q7Z398 422 aa3.36□□□□□ -1.87
CMSS1-204ENST00000479555 RBM45Q8IUH3 476 aaKnown RBP3.36□□□□□ -1.87
CMSS1-204ENST00000479555 OR4N5Q8IXE1 308 aa3.36□□□□□ -1.87
CMSS1-204ENST00000479555 ZNF440Q8IYI8 595 aa3.36□□□□□ -1.87
CMSS1-204ENST00000479555 SELENOHQ8IZQ5 122 aaKnown RBP3.36□□□□□ -1.87
CMSS1-204ENST00000479555 CLDN19Q8N6F1 224 aa3.36□□□□□ -1.87
CMSS1-204ENST00000479555 STPG4Q8N801 248 aa3.36□□□□□ -1.87
CMSS1-204ENST00000479555 BMPERQ8N8U9 685 aa3.36□□□□□ -1.87
CMSS1-204ENST00000479555 FER1L6-AS1Q8NA97 138 aa3.36□□□□□ -1.87
CMSS1-204ENST00000479555 OR10G3Q8NGC4 313 aa3.36□□□□□ -1.87
CMSS1-204ENST00000479555 OR51A4Q8NGJ6 313 aa3.36□□□□□ -1.87
CMSS1-204ENST00000479555 OR13A1Q8NGR1 328 aa3.36□□□□□ -1.87
CMSS1-204ENST00000479555 CT45A3Q8NHU0 189 aa3.36□□□□□ -1.87
CMSS1-204ENST00000479555 MRPL30Q8TCC3 161 aaKnown RBP3.36□□□□□ -1.87
CMSS1-204ENST00000479555 MARCH1Q8TCQ1 289 aa3.36□□□□□ -1.87
CMSS1-204ENST00000479555 TMEM37Q8WXS4 190 aa3.36□□□□□ -1.87
CMSS1-204ENST00000479555 ZNF501Q96CX3 271 aaPredicted RBP3.36□□□□□ -1.87
CMSS1-204ENST00000479555 PCED1BQ96HM7 432 aa3.36□□□□□ -1.87
CMSS1-204ENST00000479555 KCNS1Q96KK3 526 aa3.36□□□□□ -1.87
CMSS1-204ENST00000479555 POM121L2Q96KW2 1035 aa3.36□□□□□ -1.87
CMSS1-204ENST00000479555 GPER1Q99527 375 aa3.36□□□□□ -1.87
CMSS1-204ENST00000479555 GPA33Q99795 319 aa3.36□□□□□ -1.87
CMSS1-204ENST00000479555 NKX3-1Q99801 234 aaPredicted RBP3.36□□□□□ -1.87
CMSS1-204ENST00000479555 KLHDC3Q9BQ90 382 aa3.36□□□□□ -1.87
CMSS1-204ENST00000479555 RTBDNQ9BSG5 229 aaPredicted RBP3.36□□□□□ -1.87
CMSS1-204ENST00000479555 WDR76Q9H967 626 aa3.36□□□□□ -1.87
CMSS1-204ENST00000479555 CENPMQ9NSP4 180 aa3.36□□□□□ -1.87
CMSS1-204ENST00000479555 TAAR2Q9P1P5 351 aa3.36□□□□□ -1.87
CMSS1-204ENST00000479555 ZNF319Q9P2F9 582 aa3.36□□□□□ -1.87
CMSS1-204ENST00000479555 MRM2Q9UI43 246 aaKnown RBP3.36□□□□□ -1.87
CMSS1-204ENST00000479555 HHLA2Q9UM44 414 aa3.36□□□□□ -1.87
CMSS1-204ENST00000479555 ZNF443Q9Y2A4 671 aaPredicted RBP3.36□□□□□ -1.87
CMSS1-204ENST00000479555 LSM5Q9Y4Y9 91 aaKnown RBP3.36□□□□□ -1.87
CMSS1-204ENST00000479555 TIMM9Q9Y5J7 89 aa3.36□□□□□ -1.87
CMSS1-204ENST00000479555 LY96Q9Y6Y9 160 aa3.36□□□□□ -1.87
CMSS1-204ENST00000479555 ZNF106Q9H2Y7 1883 aaKnown RBP3.36□□□□□ -1.87
CMSS1-204ENST00000479555 ANKRD12Q6UB98 2062 aa3.35□□□□□ -1.87
CMSS1-204ENST00000479555 PLXNA1Q9UIW2 1896 aa3.35□□□□□ -1.87
CMSS1-204ENST00000479555 A0A0U1RQK1 487 aa3.35□□□□□ -1.87
CMSS1-204ENST00000479555 MDFIC2A0A1B0GVS7 189 aa3.35□□□□□ -1.87
CMSS1-204ENST00000479555 A0A1W2PPI3 338 aa3.35□□□□□ -1.87
CMSS1-204ENST00000479555 TMEM189A5PLL7 270 aa3.35□□□□□ -1.87
CMSS1-204ENST00000479555 CRYM-AS1A6NIL9 109 aa3.35□□□□□ -1.87
CMSS1-204ENST00000479555 PRR32B1ATL7 298 aa3.35□□□□□ -1.87
CMSS1-204ENST00000479555 C17orf105B2RV13 164 aa3.35□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms