RNA–Protein interactions for RNA: ENST00000476391.5

HDAC1-206, Transcript of histone deacetylase 1, humanhuman

TSL 1 (best)

Gene HDAC1, Length 2,409 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-206ENST00000476391 A0A1W2PR80 420 aa11.68□□□□□ -0.54
HDAC1-206ENST00000476391 M0R135 149 aa11.68□□□□□ -0.54
HDAC1-206ENST00000476391 CDIPTO14735 213 aa11.68□□□□□ -0.54
HDAC1-206ENST00000476391 OR7C1O76099 320 aaPredicted RBP11.68□□□□□ -0.54
HDAC1-206ENST00000476391 VAMP5O95183 116 aa11.68□□□□□ -0.54
HDAC1-206ENST00000476391 CXCL10P02778 98 aa11.68□□□□□ -0.54
HDAC1-206ENST00000476391 FRMD6-AS1P0C7T7 363 aa11.68□□□□□ -0.54
HDAC1-206ENST00000476391 NTF3P20783 257 aa11.68□□□□□ -0.54
HDAC1-206ENST00000476391 ZDHHC23Q8IYP9 409 aa11.68□□□□□ -0.54
HDAC1-206ENST00000476391 OR1K1Q8NGR3 316 aa11.68□□□□□ -0.54
HDAC1-206ENST00000476391 NEUROG1Q92886 237 aa11.68□□□□□ -0.54
HDAC1-206ENST00000476391 ZNF799Q96GE5 643 aa11.68□□□□□ -0.54
HDAC1-206ENST00000476391 SGCZQ96LD1 299 aa11.68□□□□□ -0.54
HDAC1-206ENST00000476391 MUC21A0A0G2JKD1 596 aa11.68□□□□□ -0.54
HDAC1-206ENST00000476391 MUC21A0A140T8X8 626 aa11.68□□□□□ -0.54
HDAC1-206ENST00000476391 A0A1B0GV72 72 aa11.68□□□□□ -0.54
HDAC1-206ENST00000476391 OTOL1A6NHN0 477 aaPredicted RBP11.68□□□□□ -0.54
HDAC1-206ENST00000476391 HLA-DQA1P01909 254 aa11.68□□□□□ -0.54
HDAC1-206ENST00000476391 SRIP30626 198 aa11.68□□□□□ -0.54
HDAC1-206ENST00000476391 PSG3Q16557 428 aa11.68□□□□□ -0.54
HDAC1-206ENST00000476391 MUC21Q5SSG8 566 aa11.68□□□□□ -0.54
HDAC1-206ENST00000476391 CARD17Q5XLA6 110 aa11.68□□□□□ -0.54
HDAC1-206ENST00000476391 OR51H1Q8NH63 302 aa11.68□□□□□ -0.54
HDAC1-206ENST00000476391 SLC25A40Q8TBP6 338 aa11.68□□□□□ -0.54
HDAC1-206ENST00000476391 COL5A1P20908 1838 aaPredicted RBP11.68□□□□□ -0.54
HDAC1-206ENST00000476391 USP34Q70CQ2 3546 aa11.68□□□□□ -0.54
HDAC1-206ENST00000476391 TRAV8-6A0A0B4J262 113 aa11.67□□□□□ -0.54
HDAC1-206ENST00000476391 ZNF816-ZNF321PA0A0X1KG74 233 aa11.67□□□□□ -0.54
HDAC1-206ENST00000476391 FAM90A10PA6NDY2 464 aa11.67□□□□□ -0.54
HDAC1-206ENST00000476391 FAM90A18PA6NE21 464 aa11.67□□□□□ -0.54
HDAC1-206ENST00000476391 FAM90A16PA6NEW6 464 aa11.67□□□□□ -0.54
HDAC1-206ENST00000476391 FAM90A20PA6NIJ5 464 aa11.67□□□□□ -0.54
HDAC1-206ENST00000476391 FAM90A8PA6NJQ4 464 aa11.67□□□□□ -0.54
HDAC1-206ENST00000476391 FAM90A7PA6NKC0 464 aa11.67□□□□□ -0.54
HDAC1-206ENST00000476391 FAM90A22PA8MWA6 464 aa11.67□□□□□ -0.54
HDAC1-206ENST00000476391 FAM90A12PA8MX19 464 aa11.67□□□□□ -0.54
HDAC1-206ENST00000476391 FAM90A5PA8MXJ8 464 aa11.67□□□□□ -0.54
HDAC1-206ENST00000476391 FAM90A23PA8MXZ1 464 aa11.67□□□□□ -0.54
HDAC1-206ENST00000476391 SLC31A1O15431 190 aa11.67□□□□□ -0.54
HDAC1-206ENST00000476391 IGKV1-39P01597 117 aa11.67□□□□□ -0.54
HDAC1-206ENST00000476391 IGKV1D-39P04432 117 aa11.67□□□□□ -0.54
HDAC1-206ENST00000476391 FAM90A15PP0C7V4 464 aa11.67□□□□□ -0.54
HDAC1-206ENST00000476391 FAM90A13PP0C7W8 464 aa11.67□□□□□ -0.54
HDAC1-206ENST00000476391 FAM90A14PP0C7W9 464 aa11.67□□□□□ -0.54
HDAC1-206ENST00000476391 FAM90A24PP0C7X0 464 aa11.67□□□□□ -0.54
HDAC1-206ENST00000476391 GUCA1AP43080 201 aaPredicted RBP11.67□□□□□ -0.54
HDAC1-206ENST00000476391 PSG7Q13046 419 aa11.67□□□□□ -0.54
HDAC1-206ENST00000476391 RSPO1Q2MKA7 263 aaPredicted RBP11.67□□□□□ -0.54
HDAC1-206ENST00000476391 RNFT1Q5M7Z0 435 aa11.67□□□□□ -0.54
HDAC1-206ENST00000476391 OR8I2Q8N0Y5 310 aa11.67□□□□□ -0.54
HDAC1-206ENST00000476391 TSACCQ96A04 125 aaPredicted RBP11.67□□□□□ -0.54
HDAC1-206ENST00000476391 FAM181BA6NEQ2 426 aa11.67□□□□□ -0.54
HDAC1-206ENST00000476391 TMEM150CB9EJG8 249 aa11.67□□□□□ -0.54
HDAC1-206ENST00000476391 C9JCJ5 164 aa11.67□□□□□ -0.54
HDAC1-206ENST00000476391 BMPR1BO00238 502 aa11.67□□□□□ -0.54
HDAC1-206ENST00000476391 CLDN1O95832 211 aa11.67□□□□□ -0.54
HDAC1-206ENST00000476391 IGKV1-5P01602 117 aa11.67□□□□□ -0.54
HDAC1-206ENST00000476391 UBE2G1P62253 170 aa11.67□□□□□ -0.54
HDAC1-206ENST00000476391 PDCD1Q15116 288 aa11.67□□□□□ -0.54
HDAC1-206ENST00000476391 Q56UQ5 140 aa11.67□□□□□ -0.54
HDAC1-206ENST00000476391 C2orf27AQ580R0 203 aa11.67□□□□□ -0.54
HDAC1-206ENST00000476391 GTF2H5Q6ZYL4 71 aa11.67□□□□□ -0.54
HDAC1-206ENST00000476391 OR1B1Q8NGR6 318 aa11.67□□□□□ -0.54
HDAC1-206ENST00000476391 OR51B2Q9Y5P1 312 aa11.67□□□□□ -0.54
HDAC1-206ENST00000476391 V9GYV3 84 aa11.67□□□□□ -0.54
HDAC1-206ENST00000476391 RTTNQ86VV8 2226 aa11.66□□□□□ -0.54
HDAC1-206ENST00000476391 GAGE10A6NGK3 116 aa11.66□□□□□ -0.54
HDAC1-206ENST00000476391 H3BML4 177 aa11.66□□□□□ -0.54
HDAC1-206ENST00000476391 J3QW42 95 aa11.66□□□□□ -0.54
HDAC1-206ENST00000476391 K7EN84 100 aa11.66□□□□□ -0.54
HDAC1-206ENST00000476391 SUMO3P55854 103 aaPredicted RBP11.66□□□□□ -0.54
HDAC1-206ENST00000476391 VWC2Q2TAL6 325 aa11.66□□□□□ -0.54
HDAC1-206ENST00000476391 KIAA1644Q3SXP7 199 aa11.66□□□□□ -0.54
HDAC1-206ENST00000476391 UFSP1Q6NVU6 142 aa11.66□□□□□ -0.54
HDAC1-206ENST00000476391 SPTSSAQ969W0 71 aa11.66□□□□□ -0.54
HDAC1-206ENST00000476391 TMEM204Q9BSN7 226 aa11.66□□□□□ -0.54
HDAC1-206ENST00000476391 ATP23Q9Y6H3 246 aa11.66□□□□□ -0.54
HDAC1-206ENST00000476391 HLA-DRB1P01911 266 aa11.66□□□□□ -0.54
HDAC1-206ENST00000476391 DAZAP2Q15038 168 aaPredicted RBP11.66□□□□□ -0.54
HDAC1-206ENST00000476391 PHYHD1Q5SRE7 291 aa11.66□□□□□ -0.54
HDAC1-206ENST00000476391 TMEM42Q69YG0 159 aa11.66□□□□□ -0.54
HDAC1-206ENST00000476391 OR1L1Q8NH94 360 aa11.66□□□□□ -0.54
HDAC1-206ENST00000476391 SCO2A0A1W2PP80 73 aa11.65□□□□□ -0.54
HDAC1-206ENST00000476391 CELA3BP08861 270 aa11.65□□□□□ -0.54
HDAC1-206ENST00000476391 CD1BP29016 333 aa11.65□□□□□ -0.54
HDAC1-206ENST00000476391 GPR6P46095 362 aaPredicted RBP11.65□□□□□ -0.54
HDAC1-206ENST00000476391 TGFBR3Q03167 851 aa11.65□□□□□ -0.54
HDAC1-206ENST00000476391 TFF3Q07654 80 aa11.65□□□□□ -0.54
HDAC1-206ENST00000476391 EBLN2Q6P2I7 272 aa11.65□□□□□ -0.54
HDAC1-206ENST00000476391 SLC25A34Q6PIV7 304 aa11.65□□□□□ -0.54
HDAC1-206ENST00000476391 FOXL2NBQ6ZUU3 175 aa11.65□□□□□ -0.54
HDAC1-206ENST00000476391 DEFB128Q7Z7B8 93 aa11.65□□□□□ -0.54
HDAC1-206ENST00000476391 C5orf17Q8NAS9 161 aa11.65□□□□□ -0.54
HDAC1-206ENST00000476391 PATE1Q8WXA2 126 aa11.65□□□□□ -0.54
HDAC1-206ENST00000476391 LRRC61Q9BV99 259 aa11.65□□□□□ -0.54
HDAC1-206ENST00000476391 OR2W1Q9Y3N9 320 aa11.65□□□□□ -0.54
HDAC1-206ENST00000476391 IGKV1-6A0A0C4DH72 117 aa11.65□□□□□ -0.55
HDAC1-206ENST00000476391 MANSC4A6NHS7 340 aaPredicted RBP11.65□□□□□ -0.55
HDAC1-206ENST00000476391 A6NJY4 79 aa11.65□□□□□ -0.55
HDAC1-206ENST00000476391 PMS2P5A8MQ11 134 aa11.65□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms