RNA–Protein interactions for RNA: ENST00000475639.5

U2AF1-209, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best)

Gene U2AF1, Length 4,694 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-209ENST00000475639 SMDT1Q9H4I9 107 aa10.02□□□□□ -0.81
U2AF1-209ENST00000475639 UQCR10Q9UDW1 63 aa10.02□□□□□ -0.81
U2AF1-209ENST00000475639 PRKNO60260 465 aaPredicted RBP10.02□□□□□ -0.81
U2AF1-209ENST00000475639 CXorf1O96002 111 aa10.02□□□□□ -0.81
U2AF1-209ENST00000475639 HMGA1P17096 107 aaKnown RBP10.02□□□□□ -0.81
U2AF1-209ENST00000475639 RRN3P1Q2M238 152 aa10.02□□□□□ -0.81
U2AF1-209ENST00000475639 B4E171 279 aa10.01□□□□□ -0.81
U2AF1-209ENST00000475639 TDGF1P3P51864 188 aa10.01□□□□□ -0.81
U2AF1-209ENST00000475639 HERPUD1Q15011 391 aa10.01□□□□□ -0.81
U2AF1-209ENST00000475639 C2orf83Q53S99 150 aa10.01□□□□□ -0.81
U2AF1-209ENST00000475639 TMEM78Q5T7P6 136 aa10.01□□□□□ -0.81
U2AF1-209ENST00000475639 TMEM211Q6ICI0 200 aa10.01□□□□□ -0.81
U2AF1-209ENST00000475639 SLC25A34Q6PIV7 304 aa10.01□□□□□ -0.81
U2AF1-209ENST00000475639 KIAA1549LQ6ZVL6 1849 aa10.01□□□□□ -0.81
U2AF1-209ENST00000475639 ZNF519Q8TB69 540 aa10.01□□□□□ -0.81
U2AF1-209ENST00000475639 TSPAN32Q96QS1 320 aa10.01□□□□□ -0.81
U2AF1-209ENST00000475639 KLK10O43240 276 aa10.01□□□□□ -0.81
U2AF1-209ENST00000475639 CA11O75493 328 aa10.01□□□□□ -0.81
U2AF1-209ENST00000475639 C1QL1O75973 258 aa10.01□□□□□ -0.81
U2AF1-209ENST00000475639 CKS2P33552 79 aa10.01□□□□□ -0.81
U2AF1-209ENST00000475639 TEPPQ6URK8 271 aa10.01□□□□□ -0.81
U2AF1-209ENST00000475639 WFDC3Q8IUB2 231 aa10.01□□□□□ -0.81
U2AF1-209ENST00000475639 TM4SF19Q96DZ7 209 aa10.01□□□□□ -0.81
U2AF1-209ENST00000475639 UBE2L6O14933 153 aa10.01□□□□□ -0.81
U2AF1-209ENST00000475639 LEPROTL1O95214 131 aa10.01□□□□□ -0.81
U2AF1-209ENST00000475639 PPP1R17O96001 155 aa10.01□□□□□ -0.81
U2AF1-209ENST00000475639 FCARP24071 287 aa10.01□□□□□ -0.81
U2AF1-209ENST00000475639 EBLN2Q6P2I7 272 aa10.01□□□□□ -0.81
U2AF1-209ENST00000475639 HSPB9Q9BQS6 159 aa10.01□□□□□ -0.81
U2AF1-209ENST00000475639 ZNF665Q9H7R5 613 aa10.01□□□□□ -0.81
U2AF1-209ENST00000475639 FLRT3Q9NZU0 649 aa10.01□□□□□ -0.81
U2AF1-209ENST00000475639 MRPS18BQ9Y676 258 aaKnown RBP10.01□□□□□ -0.81
U2AF1-209ENST00000475639 KBTBD11O94819 623 aa10.01□□□□□ -0.81
U2AF1-209ENST00000475639 EMDP50402 254 aa10.01□□□□□ -0.81
U2AF1-209ENST00000475639 NUDT16L1Q9BRJ7 211 aaKnown RBP10.01□□□□□ -0.81
U2AF1-209ENST00000475639 TMEM204Q9BSN7 226 aa10.01□□□□□ -0.81
U2AF1-209ENST00000475639 CXXC4Q9H2H0 198 aa10.01□□□□□ -0.81
U2AF1-209ENST00000475639 MRPS18CQ9Y3D5 142 aaKnown RBP10.01□□□□□ -0.81
U2AF1-209ENST00000475639 IGHV3-13P01766 116 aa10□□□□□ -0.81
U2AF1-209ENST00000475639 IGHV3-7P01780 117 aa10□□□□□ -0.81
U2AF1-209ENST00000475639 CD3EP07766 207 aa10□□□□□ -0.81
U2AF1-209ENST00000475639 SEC11BP0C7V7 166 aa10□□□□□ -0.81
U2AF1-209ENST00000475639 DANCRP0C864 163 aa10□□□□□ -0.81
U2AF1-209ENST00000475639 LGALS3P17931 250 aaKnown RBP10□□□□□ -0.81
U2AF1-209ENST00000475639 IL15RAQ13261 267 aa10□□□□□ -0.81
U2AF1-209ENST00000475639 EIF3IQ13347 325 aaKnown RBP10□□□□□ -0.81
U2AF1-209ENST00000475639 OR13C6PQ8NH95 151 aa10□□□□□ -0.81
U2AF1-209ENST00000475639 HARBI1Q96MB7 349 aa10□□□□□ -0.81
U2AF1-209ENST00000475639 RARRES2Q99969 163 aa10□□□□□ -0.81
U2AF1-209ENST00000475639 TXNDC17Q9BRA2 123 aa10□□□□□ -0.81
U2AF1-209ENST00000475639 SLC26A1Q9H2B4 701 aa10□□□□□ -0.81
U2AF1-209ENST00000475639 TBX21Q9UL17 535 aa10□□□□□ -0.81
U2AF1-209ENST00000475639 CACNA1IQ9P0X4 2223 aa10□□□□□ -0.81
U2AF1-209ENST00000475639 K7ESM1 405 aa10□□□□□ -0.81
U2AF1-209ENST00000475639 SS18L1O75177 396 aaPredicted RBP10□□□□□ -0.81
U2AF1-209ENST00000475639 LMO1P25800 156 aa10□□□□□ -0.81
U2AF1-209ENST00000475639 ZNF774Q6NX45 483 aa10□□□□□ -0.81
U2AF1-209ENST00000475639 STPG3Q8N7X2 389 aa10□□□□□ -0.81
U2AF1-209ENST00000475639 SYT8Q8NBV8 401 aa10□□□□□ -0.81
U2AF1-209ENST00000475639 ASCL3Q9NQ33 180 aa10□□□□□ -0.81
U2AF1-209ENST00000475639 A0A0B4J2E0 115 aa10□□□□□ -0.81
U2AF1-209ENST00000475639 LOC389332A0A1B0GUA5 103 aa10□□□□□ -0.81
U2AF1-209ENST00000475639 A0A1B0GX12 115 aa10□□□□□ -0.81
U2AF1-209ENST00000475639 GAPDHP04406 335 aaKnown RBP10□□□□□ -0.81
U2AF1-209ENST00000475639 GFERP55789 205 aa10□□□□□ -0.81
U2AF1-209ENST00000475639 CCDC144NLQ6NUI1 221 aa10□□□□□ -0.81
U2AF1-209ENST00000475639 POC1AQ8NBT0 407 aa10□□□□□ -0.81
U2AF1-209ENST00000475639 ZBTB34Q8NCN2 500 aa10□□□□□ -0.81
U2AF1-209ENST00000475639 SCNM1Q9BWG6 230 aa10□□□□□ -0.81
U2AF1-209ENST00000475639 PRDM14Q9GZV8 571 aa10□□□□□ -0.81
U2AF1-209ENST00000475639 LNP1A1A4G5 178 aa10□□□□□ -0.81
U2AF1-209ENST00000475639 A6NNC1 897 aa10□□□□□ -0.81
U2AF1-209ENST00000475639 LMO7DNF2Z398 122 aa10□□□□□ -0.81
U2AF1-209ENST00000475639 GFRA1P56159 465 aa10□□□□□ -0.81
U2AF1-209ENST00000475639 AQP3Q92482 292 aa10□□□□□ -0.81
U2AF1-209ENST00000475639 C11orf68Q9H3H3 251 aaKnown RBP10□□□□□ -0.81
U2AF1-209ENST00000475639 GEMIN7Q9H840 131 aaKnown RBP10□□□□□ -0.81
U2AF1-209ENST00000475639 FAM206AQ9NX38 181 aa10□□□□□ -0.81
U2AF1-209ENST00000475639 TMPRSS2O15393 492 aa9.99□□□□□ -0.81
U2AF1-209ENST00000475639 HLA-DQA1P01909 254 aa9.99□□□□□ -0.81
U2AF1-209ENST00000475639 GAGE1Q13065 139 aa9.99□□□□□ -0.81
U2AF1-209ENST00000475639 HES3Q5TGS1 186 aa9.99□□□□□ -0.81
U2AF1-209ENST00000475639 NUDT10Q8NFP7 164 aa9.99□□□□□ -0.81
U2AF1-209ENST00000475639 RNASEH2CQ8TDP1 164 aaKnown RBP9.99□□□□□ -0.81
U2AF1-209ENST00000475639 NUDT11Q96G61 164 aa9.99□□□□□ -0.81
U2AF1-209ENST00000475639 PHF7Q9BWX1 381 aaPredicted RBP9.99□□□□□ -0.81
U2AF1-209ENST00000475639 C5orf66Q9H5L9 145 aa9.99□□□□□ -0.81
U2AF1-209ENST00000475639 CBLN4Q9NTU7 201 aa9.99□□□□□ -0.81
U2AF1-209ENST00000475639 JKAMPQ9P055 326 aa9.99□□□□□ -0.81
U2AF1-209ENST00000475639 LILRA5A6NI73 299 aa9.99□□□□□ -0.81
U2AF1-209ENST00000475639 HYPMO75409 117 aa9.99□□□□□ -0.81
U2AF1-209ENST00000475639 SUPT4H1P63272 117 aaKnown RBP9.99□□□□□ -0.81
U2AF1-209ENST00000475639 DCAF10Q5QP82 559 aa9.99□□□□□ -0.81
U2AF1-209ENST00000475639 MS4A5Q9H3V2 200 aa9.99□□□□□ -0.81
U2AF1-209ENST00000475639 HSF4Q9ULV5 492 aa9.99□□□□□ -0.81
U2AF1-209ENST00000475639 TMEM189A5PLL7 270 aa9.99□□□□□ -0.81
U2AF1-209ENST00000475639 FAM181BA6NEQ2 426 aa9.99□□□□□ -0.81
U2AF1-209ENST00000475639 TRDCB7Z8K6 153 aa9.99□□□□□ -0.81
U2AF1-209ENST00000475639 NKX2-2O95096 273 aa9.99□□□□□ -0.81
U2AF1-209ENST00000475639 AMBPP02760 352 aa9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms