RNA–Protein interactions for RNA: ENST00000471968.1

HDAC3-206, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 529 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-206ENST00000471968 FAM98BQ52LJ0 330 aaKnown RBP4.4□□□□□ -1.71
HDAC3-206ENST00000471968 EPGNQ6UW88 154 aa4.4□□□□□ -1.71
HDAC3-206ENST00000471968 C19orf35Q6ZS72 473 aa4.4□□□□□ -1.71
HDAC3-206ENST00000471968 FAM24BQ8N5W8 94 aa4.4□□□□□ -1.71
HDAC3-206ENST00000471968 Q8N814 137 aa4.4□□□□□ -1.71
HDAC3-206ENST00000471968 OR5D18Q8NGL1 313 aa4.4□□□□□ -1.71
HDAC3-206ENST00000471968 OR10A6Q8NH74 314 aa4.4□□□□□ -1.71
HDAC3-206ENST00000471968 OTOSQ8NHW6 89 aa4.4□□□□□ -1.71
HDAC3-206ENST00000471968 CNIH3Q8TBE1 160 aa4.4□□□□□ -1.71
HDAC3-206ENST00000471968 TMEM190Q8WZ59 177 aa4.4□□□□□ -1.71
HDAC3-206ENST00000471968 EEF1AKMT3Q96AZ1 226 aa4.4□□□□□ -1.71
HDAC3-206ENST00000471968 OR2A7Q96R45 310 aa4.4□□□□□ -1.71
HDAC3-206ENST00000471968 NEU1Q99519 415 aa4.4□□□□□ -1.71
HDAC3-206ENST00000471968 SH3GL1Q99961 368 aa4.4□□□□□ -1.71
HDAC3-206ENST00000471968 ELAC2Q9BQ52 826 aaKnown RBP4.4□□□□□ -1.71
HDAC3-206ENST00000471968 C20orf24Q9BUV8 137 aa4.4□□□□□ -1.71
HDAC3-206ENST00000471968 NDUFA13Q9P0J0 144 aa4.4□□□□□ -1.71
HDAC3-206ENST00000471968 NUFIP1Q9UHK0 495 aaKnown RBP4.4□□□□□ -1.71
HDAC3-206ENST00000471968 YTHDF2Q9Y5A9 579 aaKnown RBP4.4□□□□□ -1.71
HDAC3-206ENST00000471968 A0A1B0GTI1 187 aa4.39□□□□□ -1.71
HDAC3-206ENST00000471968 SMIM31A0A1B0GVY4 71 aa4.39□□□□□ -1.71
HDAC3-206ENST00000471968 SPINT2O43291 252 aa4.39□□□□□ -1.71
HDAC3-206ENST00000471968 GMNNO75496 209 aa4.39□□□□□ -1.71
HDAC3-206ENST00000471968 DCTN3O75935 186 aa4.39□□□□□ -1.71
HDAC3-206ENST00000471968 DFFBO76075 338 aa4.39□□□□□ -1.71
HDAC3-206ENST00000471968 IGLV2-11P01706 119 aa4.39□□□□□ -1.71
HDAC3-206ENST00000471968 CPEP16870 476 aa4.39□□□□□ -1.71
HDAC3-206ENST00000471968 GPR183P32249 361 aa4.39□□□□□ -1.71
HDAC3-206ENST00000471968 ALDH3B2P48448 385 aa4.39□□□□□ -1.71
HDAC3-206ENST00000471968 KCNJ3P48549 501 aa4.39□□□□□ -1.71
HDAC3-206ENST00000471968 BLVRAP53004 296 aa4.39□□□□□ -1.71
HDAC3-206ENST00000471968 LIPEQ05469 1076 aa4.39□□□□□ -1.71
HDAC3-206ENST00000471968 SF3A3Q12874 501 aaKnown RBP eCLIP4.39□□□□□ -1.712e-6■■■■□ 20.9
HDAC3-206ENST00000471968 ALKBH1Q13686 389 aaKnown RBP4.39□□□□□ -1.71
HDAC3-206ENST00000471968 CYLC2Q14093 348 aaPredicted RBP4.39□□□□□ -1.71
HDAC3-206ENST00000471968 GNMTQ14749 295 aa4.39□□□□□ -1.71
HDAC3-206ENST00000471968 MORN2Q502X0 79 aa4.39□□□□□ -1.71
HDAC3-206ENST00000471968 CYBRD1Q53TN4 286 aa4.39□□□□□ -1.71
HDAC3-206ENST00000471968 RPL39P5Q59GN2 51 aa4.39□□□□□ -1.71
HDAC3-206ENST00000471968 GLT8D1Q68CQ7 371 aa4.39□□□□□ -1.71
HDAC3-206ENST00000471968 ZNF529Q6P280 563 aa4.39□□□□□ -1.71
HDAC3-206ENST00000471968 DLEU7Q6UYE1 221 aa4.39□□□□□ -1.71
HDAC3-206ENST00000471968 SSX9Q7RTT3 188 aa4.39□□□□□ -1.71
HDAC3-206ENST00000471968 IQCF1Q8N6M8 205 aa4.39□□□□□ -1.71
HDAC3-206ENST00000471968 STON2Q8WXE9 905 aa4.39□□□□□ -1.71
HDAC3-206ENST00000471968 OR14A2Q96R54 314 aa4.39□□□□□ -1.71
HDAC3-206ENST00000471968 ZNF436Q9C0F3 470 aaPredicted RBP4.39□□□□□ -1.71
HDAC3-206ENST00000471968 OR2S2Q9NQN1 319 aa4.39□□□□□ -1.71
HDAC3-206ENST00000471968 SLC35D1Q9NTN3 355 aa4.39□□□□□ -1.71
HDAC3-206ENST00000471968 GID8Q9NWU2 228 aa4.39□□□□□ -1.71
HDAC3-206ENST00000471968 PAIP2BQ9ULR5 123 aaKnown RBP4.39□□□□□ -1.71
HDAC3-206ENST00000471968 V9GYQ6 96 aa4.39□□□□□ -1.71
HDAC3-206ENST00000471968 IGHV3-49A0A0A0MS15 119 aa4.38□□□□□ -1.71
HDAC3-206ENST00000471968 LRCOL1A6NCL2 159 aa4.38□□□□□ -1.71
HDAC3-206ENST00000471968 SMIM9A6NGZ8 99 aa4.38□□□□□ -1.71
HDAC3-206ENST00000471968 DHRS7CA6NNS2 312 aa4.38□□□□□ -1.71
HDAC3-206ENST00000471968 LINC00473A8K010 186 aa4.38□□□□□ -1.71
HDAC3-206ENST00000471968 ZNF705FA8MVS1 300 aaPredicted RBP4.38□□□□□ -1.71
HDAC3-206ENST00000471968 GSTA4O15217 222 aa4.38□□□□□ -1.71
HDAC3-206ENST00000471968 SIVA1O15304 175 aa4.38□□□□□ -1.71
HDAC3-206ENST00000471968 SELENOFO60613 162 aa4.38□□□□□ -1.71
HDAC3-206ENST00000471968 EDF1O60869 148 aaKnown RBP4.38□□□□□ -1.71
HDAC3-206ENST00000471968 PFDN1O60925 122 aa4.38□□□□□ -1.71
HDAC3-206ENST00000471968 HBZP02008 142 aa4.38□□□□□ -1.71
HDAC3-206ENST00000471968 ZNF705DP0CH99 300 aaPredicted RBP4.38□□□□□ -1.71
HDAC3-206ENST00000471968 ZNF705BP0CI00 300 aaPredicted RBP4.38□□□□□ -1.71
HDAC3-206ENST00000471968 PSMB6P28072 239 aa4.38□□□□□ -1.71
HDAC3-206ENST00000471968 RPS7P62081 194 aaKnown RBP4.38□□□□□ -1.71
HDAC3-206ENST00000471968 PAFAH1B2P68402 229 aa4.38□□□□□ -1.71
HDAC3-206ENST00000471968 PLA2G7Q13093 441 aa4.38□□□□□ -1.71
HDAC3-206ENST00000471968 CNPY1Q3B7I2 92 aa4.38□□□□□ -1.71
HDAC3-206ENST00000471968 ACOT6Q3I5F7 207 aaPredicted RBP4.38□□□□□ -1.71
HDAC3-206ENST00000471968 LINC01620Q4KN68 170 aa4.38□□□□□ -1.71
HDAC3-206ENST00000471968 ACTL10Q5JWF8 245 aa4.38□□□□□ -1.71
HDAC3-206ENST00000471968 PLET1Q6UQ28 207 aa4.38□□□□□ -1.71
HDAC3-206ENST00000471968 ZNF705AQ6ZN79 300 aaPredicted RBP4.38□□□□□ -1.71
HDAC3-206ENST00000471968 ZBTB8BQ8NAP8 495 aaPredicted RBP4.38□□□□□ -1.71
HDAC3-206ENST00000471968 OR5AN1Q8NGI8 311 aa4.38□□□□□ -1.71
HDAC3-206ENST00000471968 RP9Q8TA86 221 aaKnown RBP4.38□□□□□ -1.71
HDAC3-206ENST00000471968 SRSF12Q8WXF0 261 aaKnown RBP4.38□□□□□ -1.71
HDAC3-206ENST00000471968 RBPMSQ93062 196 aaKnown RBP4.38□□□□□ -1.71
HDAC3-206ENST00000471968 LINC01600Q96MT4 127 aa4.38□□□□□ -1.71
HDAC3-206ENST00000471968 CMTM3Q96MX0 182 aa4.38□□□□□ -1.71
HDAC3-206ENST00000471968 ZNF184Q99676 751 aaPredicted RBP4.38□□□□□ -1.71
HDAC3-206ENST00000471968 EBF4Q9BQW3 602 aa4.38□□□□□ -1.71
HDAC3-206ENST00000471968 DPCDQ9BVM2 203 aaPredicted RBP4.38□□□□□ -1.71
HDAC3-206ENST00000471968 C1QTNF4Q9BXJ3 329 aa4.38□□□□□ -1.71
HDAC3-206ENST00000471968 NMNAT2Q9BZQ4 307 aa4.38□□□□□ -1.71
HDAC3-206ENST00000471968 ANKRD19PQ9H560 264 aa4.38□□□□□ -1.71
HDAC3-206ENST00000471968 NEK6Q9HC98 313 aa4.38□□□□□ -1.71
HDAC3-206ENST00000471968 FGFR1OP2Q9NVK5 253 aa4.38□□□□□ -1.71
HDAC3-206ENST00000471968 GMPR2Q9P2T1 348 aaKnown RBP4.38□□□□□ -1.71
HDAC3-206ENST00000471968 TRBV4-1A0A0J9YWV2 114 aa4.37□□□□□ -1.71
HDAC3-206ENST00000471968 A0A1B0GVG6 124 aa4.37□□□□□ -1.71
HDAC3-206ENST00000471968 BBIP1A8MTZ0 92 aa4.37□□□□□ -1.71
HDAC3-206ENST00000471968 DNASE2O00115 360 aaPredicted RBP4.37□□□□□ -1.71
HDAC3-206ENST00000471968 AIPO00170 330 aa4.37□□□□□ -1.71
HDAC3-206ENST00000471968 MRASO14807 208 aa4.37□□□□□ -1.71
HDAC3-206ENST00000471968 SERPINA3P01011 423 aa4.37□□□□□ -1.71
HDAC3-206ENST00000471968 DEFB130BP0DP73 79 aa4.37□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 77.7 ms