RNA–Protein interactions for RNA: ENST00000471309.1

VPS52-216, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2

Gene VPS52, Length 505 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-216ENST00000471309 TMUB2Q71RG4 321 aa7.68□□□□□ -1.18
VPS52-216ENST00000471309 FAM71E2Q8N5Q1 922 aa7.68□□□□□ -1.18
VPS52-216ENST00000471309 ZNF525Q8N782 197 aa7.68□□□□□ -1.18
VPS52-216ENST00000471309 INO80EQ8NBZ0 244 aaPredicted RBP7.68□□□□□ -1.18
VPS52-216ENST00000471309 OR9G1Q8NH87 305 aa7.68□□□□□ -1.18
VPS52-216ENST00000471309 OR1S1Q8NH92 325 aa7.68□□□□□ -1.18
VPS52-216ENST00000471309 GPR146Q96CH1 333 aa7.68□□□□□ -1.18
VPS52-216ENST00000471309 RRNAD1Q96FB5 475 aaKnown RBP7.68□□□□□ -1.18
VPS52-216ENST00000471309 AQP10Q96PS8 301 aa7.68□□□□□ -1.18
VPS52-216ENST00000471309 ARL6Q9H0F7 186 aa7.68□□□□□ -1.18
VPS52-216ENST00000471309 TMEM133Q9H2Q1 129 aa7.68□□□□□ -1.18
VPS52-216ENST00000471309 HEXA-AS1Q9H8Q6 139 aa7.68□□□□□ -1.18
VPS52-216ENST00000471309 PLEKHA2Q9HB19 425 aa7.68□□□□□ -1.18
VPS52-216ENST00000471309 NSG2Q9Y328 171 aa7.68□□□□□ -1.18
VPS52-216ENST00000471309 PRELID3BQ9Y3B1 194 aa7.68□□□□□ -1.18
VPS52-216ENST00000471309 LSM5Q9Y4Y9 91 aaKnown RBP7.68□□□□□ -1.18
VPS52-216ENST00000471309 ADGRG4Q8IZF6 3080 aa7.68□□□□□ -1.18
VPS52-216ENST00000471309 HRNRQ86YZ3 2850 aaPredicted RBP7.67□□□□□ -1.18
VPS52-216ENST00000471309 A1L4Q6 167 aa7.67□□□□□ -1.18
VPS52-216ENST00000471309 A8MXK9 166 aa7.67□□□□□ -1.18
VPS52-216ENST00000471309 J3QR06 171 aa7.67□□□□□ -1.18
VPS52-216ENST00000471309 NDUFS8O00217 210 aa7.67□□□□□ -1.18
VPS52-216ENST00000471309 BCL2L11O43521 198 aa7.67□□□□□ -1.18
VPS52-216ENST00000471309 TSC22D2O75157 780 aa7.67□□□□□ -1.18
VPS52-216ENST00000471309 HPRT1P00492 218 aa7.67□□□□□ -1.18
VPS52-216ENST00000471309 IGHV2-5P01817 119 aa7.67□□□□□ -1.18
VPS52-216ENST00000471309 PAX1P15863 534 aa7.67□□□□□ -1.18
VPS52-216ENST00000471309 NUP62P37198 522 aaPredicted RBP7.67□□□□□ -1.18
VPS52-216ENST00000471309 NKX2-1P43699 371 aaPredicted RBP7.67□□□□□ -1.18
VPS52-216ENST00000471309 PDLIM4P50479 330 aa7.67□□□□□ -1.18
VPS52-216ENST00000471309 ZNF137PP52743 207 aa7.67□□□□□ -1.18
VPS52-216ENST00000471309 ERVFRD-1P60508 538 aa7.67□□□□□ -1.18
VPS52-216ENST00000471309 ID3Q02535 119 aa7.67□□□□□ -1.18
VPS52-216ENST00000471309 ZNF816Q0VGE8 651 aaPredicted RBP7.67□□□□□ -1.18
VPS52-216ENST00000471309 SP5Q6BEB4 398 aaPredicted RBP7.67□□□□□ -1.18
VPS52-216ENST00000471309 C1orf229Q6ZS94 237 aaPredicted RBP7.67□□□□□ -1.18
VPS52-216ENST00000471309 ZNF767PQ75MW2 155 aa7.67□□□□□ -1.18
VPS52-216ENST00000471309 OR4S2Q8NH73 311 aa7.67□□□□□ -1.18
VPS52-216ENST00000471309 TMEM186Q96B77 213 aa7.67□□□□□ -1.18
VPS52-216ENST00000471309 CACNG5Q9UF02 275 aa7.67□□□□□ -1.18
VPS52-216ENST00000471309 RCL1Q9Y2P8 373 aaKnown RBP7.67□□□□□ -1.18
VPS52-216ENST00000471309 LOC105371242A0A075B767 164 aa7.66□□□□□ -1.18
VPS52-216ENST00000471309 KANTRA0A1W2PQU2 76 aa7.66□□□□□ -1.18
VPS52-216ENST00000471309 FAM90A9PA6NNJ1 464 aa7.66□□□□□ -1.18
VPS52-216ENST00000471309 KIAA1324LA8MWY0 1029 aaPredicted RBP7.66□□□□□ -1.18
VPS52-216ENST00000471309 FAM90A26D6RGX4 464 aa7.66□□□□□ -1.18
VPS52-216ENST00000471309 J3QKU1 62 aa7.66□□□□□ -1.18
VPS52-216ENST00000471309 M0R1W7 72 aa7.66□□□□□ -1.18
VPS52-216ENST00000471309 FCGR3BO75015 233 aa7.66□□□□□ -1.18
VPS52-216ENST00000471309 MMP9P14780 707 aa7.66□□□□□ -1.18
VPS52-216ENST00000471309 PVALBP20472 110 aaPredicted RBP7.66□□□□□ -1.18
VPS52-216ENST00000471309 EPHA1P21709 976 aa7.66□□□□□ -1.18
VPS52-216ENST00000471309 IL3RAP26951 378 aa7.66□□□□□ -1.18
VPS52-216ENST00000471309 P2RY1P47900 373 aa7.66□□□□□ -1.18
VPS52-216ENST00000471309 ARHGDIBP52566 201 aa7.66□□□□□ -1.18
VPS52-216ENST00000471309 AP2S1P53680 142 aaPredicted RBP7.66□□□□□ -1.18
VPS52-216ENST00000471309 TAGLNQ01995 201 aaKnown RBP7.66□□□□□ -1.18
VPS52-216ENST00000471309 DHRS7BQ6IAN0 325 aaPredicted RBP7.66□□□□□ -1.18
VPS52-216ENST00000471309 TEX261Q6UWH6 196 aa7.66□□□□□ -1.18
VPS52-216ENST00000471309 FOXRED2Q8IWF2 684 aa7.66□□□□□ -1.18
VPS52-216ENST00000471309 ZNF295-AS1Q8N0V1 137 aa7.66□□□□□ -1.18
VPS52-216ENST00000471309 KIR3DL3Q8N743 410 aa7.66□□□□□ -1.18
VPS52-216ENST00000471309 ZNF383Q8NA42 475 aa7.66□□□□□ -1.18
VPS52-216ENST00000471309 DMBX1Q8NFW5 382 aa7.66□□□□□ -1.18
VPS52-216ENST00000471309 OR10X1Q8NGY0 326 aa7.66□□□□□ -1.18
VPS52-216ENST00000471309 R3HDM4Q96D70 268 aa7.66□□□□□ -1.18
VPS52-216ENST00000471309 PIMREGQ9BSJ6 248 aa7.66□□□□□ -1.18
VPS52-216ENST00000471309 CLEC7AQ9BXN2 247 aa7.66□□□□□ -1.18
VPS52-216ENST00000471309 BPESC1Q9GZL8 116 aa7.66□□□□□ -1.18
VPS52-216ENST00000471309 C11orf1Q9H5F2 150 aa7.66□□□□□ -1.18
VPS52-216ENST00000471309 NARFLQ9H6Q4 476 aa7.66□□□□□ -1.18
VPS52-216ENST00000471309 PAIP2BQ9ULR5 123 aaKnown RBP7.66□□□□□ -1.18
VPS52-216ENST00000471309 U3KQ87 197 aa7.66□□□□□ -1.18
VPS52-216ENST00000471309 UBR5O95071 2799 aaPredicted RBP7.66□□□□□ -1.18
VPS52-216ENST00000471309 SPTBN1Q01082 2364 aaKnown RBP7.66□□□□□ -1.18
VPS52-216ENST00000471309 IGHV2-26A0A0B4J1V2 119 aa7.65□□□□□ -1.18
VPS52-216ENST00000471309 MSGN1A6NI15 193 aa7.65□□□□□ -1.18
VPS52-216ENST00000471309 MARCH11A6NNE9 402 aa7.65□□□□□ -1.18
VPS52-216ENST00000471309 TOR1AO14656 332 aa7.65□□□□□ -1.18
VPS52-216ENST00000471309 ENSAO43768 121 aaKnown RBP7.65□□□□□ -1.18
VPS52-216ENST00000471309 KRASP01116 189 aa7.65□□□□□ -1.18
VPS52-216ENST00000471309 IGLV1-47P01700 117 aa7.65□□□□□ -1.18
VPS52-216ENST00000471309 CT45A6P0DMU7 189 aa7.65□□□□□ -1.18
VPS52-216ENST00000471309 CT45A5P0DMU8 189 aa7.65□□□□□ -1.18
VPS52-216ENST00000471309 CT45A7P0DMV0 189 aa7.65□□□□□ -1.18
VPS52-216ENST00000471309 HKR1P10072 659 aa7.65□□□□□ -1.18
VPS52-216ENST00000471309 RRASP10301 218 aa7.65□□□□□ -1.18
VPS52-216ENST00000471309 G6PCP35575 357 aa7.65□□□□□ -1.18
VPS52-216ENST00000471309 LINC00205P59089 165 aa7.65□□□□□ -1.18
VPS52-216ENST00000471309 POU2AF1Q16633 256 aa7.65□□□□□ -1.18
VPS52-216ENST00000471309 RTL8BQ17RB0 113 aa7.65□□□□□ -1.18
VPS52-216ENST00000471309 HLA-DRB5Q30154 266 aa7.65□□□□□ -1.18
VPS52-216ENST00000471309 MIDNQ504T8 468 aa7.65□□□□□ -1.18
VPS52-216ENST00000471309 CXorf66Q5JRM2 361 aaPredicted RBP7.65□□□□□ -1.18
VPS52-216ENST00000471309 Q6ZRM9 215 aa7.65□□□□□ -1.18
VPS52-216ENST00000471309 C1orf122Q6ZSJ8 110 aa7.65□□□□□ -1.18
VPS52-216ENST00000471309 H2BFWTQ7Z2G1 175 aa7.65□□□□□ -1.18
VPS52-216ENST00000471309 SLC51BQ86UW2 128 aa7.65□□□□□ -1.18
VPS52-216ENST00000471309 ABHD12Q8N2K0 398 aa7.65□□□□□ -1.18
VPS52-216ENST00000471309 BEND2Q8NDZ0 799 aa7.65□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms