RNA–Protein interactions for RNA: ENST00000427299.6

LINC00458-202, long intergenic non-protein coding RNA 458, humanhuman

TSL 1 (best) BASIC

Gene LINC00458, Length 1,030 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00458-202ENST00000427299 RIPPLY2Q5TAB7 128 aa4.14□□□□□ -1.75
LINC00458-202ENST00000427299 PLCXD3Q63HM9 321 aa4.14□□□□□ -1.75
LINC00458-202ENST00000427299 TCEAL6Q6IPX3 200 aa4.14□□□□□ -1.75
LINC00458-202ENST00000427299 SIGLEC15Q6ZMC9 328 aa4.14□□□□□ -1.75
LINC00458-202ENST00000427299 ZNF497Q6ZNH5 498 aa4.14□□□□□ -1.75
LINC00458-202ENST00000427299 DPPA2Q7Z7J5 298 aa4.14□□□□□ -1.75
LINC00458-202ENST00000427299 SAXO1Q8IYX7 474 aa4.14□□□□□ -1.75
LINC00458-202ENST00000427299 CMTM1Q8IZ96 169 aa4.14□□□□□ -1.75
LINC00458-202ENST00000427299 TMEM123Q8N131 208 aa4.14□□□□□ -1.75
LINC00458-202ENST00000427299 ZNF565Q8N9K5 539 aa4.14□□□□□ -1.75
LINC00458-202ENST00000427299 SLC24A4Q8NFF2 622 aa4.14□□□□□ -1.75
LINC00458-202ENST00000427299 OR13D1Q8NGV5 346 aa4.14□□□□□ -1.75
LINC00458-202ENST00000427299 OR8U1Q8NH10 309 aa4.14□□□□□ -1.75
LINC00458-202ENST00000427299 M1APQ8TC57 530 aa4.14□□□□□ -1.75
LINC00458-202ENST00000427299 NPRL2Q8WTW4 380 aa4.14□□□□□ -1.75
LINC00458-202ENST00000427299 HIST1H2BAQ96A08 127 aa4.14□□□□□ -1.75
LINC00458-202ENST00000427299 MRPL24Q96A35 216 aaKnown RBP4.14□□□□□ -1.75
LINC00458-202ENST00000427299 NABP1Q96AH0 204 aa4.14□□□□□ -1.75
LINC00458-202ENST00000427299 AKR1E2Q96JD6 320 aa4.14□□□□□ -1.75
LINC00458-202ENST00000427299 NIPSNAP3BQ9BS92 247 aa4.14□□□□□ -1.75
LINC00458-202ENST00000427299 ADAT1Q9BUB4 502 aaKnown RBP4.14□□□□□ -1.75
LINC00458-202ENST00000427299 RIMS4Q9H426 269 aaPredicted RBP4.14□□□□□ -1.75
LINC00458-202ENST00000427299 AK3Q9UIJ7 227 aa4.14□□□□□ -1.75
LINC00458-202ENST00000427299 MCTS1Q9ULC4 181 aaKnown RBP4.14□□□□□ -1.75
LINC00458-202ENST00000427299 RCL1Q9Y2P8 373 aaKnown RBP4.14□□□□□ -1.75
LINC00458-202ENST00000427299 CHCHD2Q9Y6H1 151 aaPredicted RBP4.14□□□□□ -1.75
LINC00458-202ENST00000427299 REV3LO60673 3130 aa4.14□□□□□ -1.75
LINC00458-202ENST00000427299 KNL1Q8NG31 2342 aa4.13□□□□□ -1.75
LINC00458-202ENST00000427299 IGHV3-20A0A0C4DH32 117 aa4.13□□□□□ -1.75
LINC00458-202ENST00000427299 hCG_38984A0A1B0GV85 526 aa4.13□□□□□ -1.75
LINC00458-202ENST00000427299 A0A1W2PN81 502 aa4.13□□□□□ -1.75
LINC00458-202ENST00000427299 COLCA2A8K830 154 aa4.13□□□□□ -1.75
LINC00458-202ENST00000427299 H0Y980 276 aa4.13□□□□□ -1.75
LINC00458-202ENST00000427299 SIGLEC5O15389 551 aa4.13□□□□□ -1.75
LINC00458-202ENST00000427299 PHF1O43189 567 aaPredicted RBP4.13□□□□□ -1.75
LINC00458-202ENST00000427299 NME2P1O60361 137 aa4.13□□□□□ -1.75
LINC00458-202ENST00000427299 NDUFS6O75380 124 aaKnown RBP4.13□□□□□ -1.75
LINC00458-202ENST00000427299 NRASP01111 189 aa4.13□□□□□ -1.75
LINC00458-202ENST00000427299 PPYP01298 95 aa4.13□□□□□ -1.75
LINC00458-202ENST00000427299 FABP1P07148 127 aa4.13□□□□□ -1.75
LINC00458-202ENST00000427299 KLK3P07288 261 aaPredicted RBP4.13□□□□□ -1.75
LINC00458-202ENST00000427299 WNT2P09544 360 aa4.13□□□□□ -1.75
LINC00458-202ENST00000427299 SLC25A6P12236 298 aa4.13□□□□□ -1.75
LINC00458-202ENST00000427299 RAB5AP20339 215 aa4.13□□□□□ -1.75
LINC00458-202ENST00000427299 S100A2P29034 98 aa4.13□□□□□ -1.75
LINC00458-202ENST00000427299 SRD5A2P31213 254 aa4.13□□□□□ -1.75
LINC00458-202ENST00000427299 CHRNA7P36544 502 aa4.13□□□□□ -1.75
LINC00458-202ENST00000427299 MDH2P40926 338 aaKnown RBP4.13□□□□□ -1.75
LINC00458-202ENST00000427299 FXYD4P59646 89 aa4.13□□□□□ -1.75
LINC00458-202ENST00000427299 H3F3AP84243 136 aa4.13□□□□□ -1.75
LINC00458-202ENST00000427299 EWSR1Q01844 656 aaKnown RBP eCLIP4.13□□□□□ -1.75
LINC00458-202ENST00000427299 SIGLEC14Q08ET2 396 aa4.13□□□□□ -1.75
LINC00458-202ENST00000427299 IL24Q13007 206 aa4.13□□□□□ -1.75
LINC00458-202ENST00000427299 SCGB2A2Q13296 93 aa4.13□□□□□ -1.75
LINC00458-202ENST00000427299 UBE2V2Q15819 145 aa4.13□□□□□ -1.75
LINC00458-202ENST00000427299 MAJINQ3KP22 176 aa4.13□□□□□ -1.75
LINC00458-202ENST00000427299 HIKESHIQ53FT3 197 aa4.13□□□□□ -1.75
LINC00458-202ENST00000427299 PHLDA2Q53GA4 152 aa4.13□□□□□ -1.75
LINC00458-202ENST00000427299 SOHLH1Q5JUK2 328 aa4.13□□□□□ -1.75
LINC00458-202ENST00000427299 DNLZQ5SXM8 178 aa4.13□□□□□ -1.75
LINC00458-202ENST00000427299 FAM27BQ5VT28 67 aa4.13□□□□□ -1.75
LINC00458-202ENST00000427299 TMEM42Q69YG0 159 aa4.13□□□□□ -1.75
LINC00458-202ENST00000427299 OR2A2Q6IF42 318 aa4.13□□□□□ -1.75
LINC00458-202ENST00000427299 ASCL4Q6XD76 172 aa4.13□□□□□ -1.75
LINC00458-202ENST00000427299 SHISA6Q6ZSJ9 500 aa4.13□□□□□ -1.75
LINC00458-202ENST00000427299 IL17RELQ6ZVW7 336 aa4.13□□□□□ -1.75
LINC00458-202ENST00000427299 C6orf201Q7Z4U5 140 aa4.13□□□□□ -1.75
LINC00458-202ENST00000427299 ZNF695Q8IW36 515 aa4.13□□□□□ -1.75
LINC00458-202ENST00000427299 C20orf196Q8IYI0 205 aa4.13□□□□□ -1.75
LINC00458-202ENST00000427299 MAPKAPK5-AS1Q8N8E1 139 aa4.13□□□□□ -1.75
LINC00458-202ENST00000427299 OR5L1Q8NGL2 311 aa4.13□□□□□ -1.75
LINC00458-202ENST00000427299 OR4D5Q8NGN0 318 aa4.13□□□□□ -1.75
LINC00458-202ENST00000427299 OR10G4Q8NGN3 311 aa4.13□□□□□ -1.75
LINC00458-202ENST00000427299 OR1F12Q8NHA8 337 aa4.13□□□□□ -1.75
LINC00458-202ENST00000427299 FAM213BQ8TBF2 198 aa4.13□□□□□ -1.75
LINC00458-202ENST00000427299 CD300LFQ8TDQ1 290 aa4.13□□□□□ -1.75
LINC00458-202ENST00000427299 SAP25Q8TEE9 199 aa4.13□□□□□ -1.75
LINC00458-202ENST00000427299 RLN3Q8WXF3 142 aa4.13□□□□□ -1.75
LINC00458-202ENST00000427299 MAFIPQ8WZ33 124 aa4.13□□□□□ -1.75
LINC00458-202ENST00000427299 CPNE4Q96A23 557 aaPredicted RBP4.13□□□□□ -1.75
LINC00458-202ENST00000427299 C18orf12Q96KH6 178 aa4.13□□□□□ -1.75
LINC00458-202ENST00000427299 PAPOLGQ9BWT3 736 aaKnown RBP4.13□□□□□ -1.75
LINC00458-202ENST00000427299 RBM24Q9BX46 236 aaKnown RBP4.13□□□□□ -1.75
LINC00458-202ENST00000427299 SMIM3Q9BZL3 60 aa4.13□□□□□ -1.75
LINC00458-202ENST00000427299 TMEM222Q9H0R3 208 aa4.13□□□□□ -1.75
LINC00458-202ENST00000427299 OR51M1Q9H341 326 aa4.13□□□□□ -1.75
LINC00458-202ENST00000427299 ZNF442Q9H7R0 627 aa4.13□□□□□ -1.75
LINC00458-202ENST00000427299 PLEKHF2Q9H8W4 249 aa4.13□□□□□ -1.75
LINC00458-202ENST00000427299 LYRM2Q9NU23 88 aaPredicted RBP4.13□□□□□ -1.75
LINC00458-202ENST00000427299 TMEM38BQ9NVV0 291 aa4.13□□□□□ -1.75
LINC00458-202ENST00000427299 ESPL1Q14674 2120 aa4.13□□□□□ -1.75
LINC00458-202ENST00000427299 GON4LQ3T8J9 2241 aa4.12□□□□□ -1.75
LINC00458-202ENST00000427299 CABIN1Q9Y6J0 2220 aa4.12□□□□□ -1.75
LINC00458-202ENST00000427299 IGHV1-45A0A0A0MS14 117 aa4.12□□□□□ -1.75
LINC00458-202ENST00000427299 C3orf85A0A1B0GTC6 90 aa4.12□□□□□ -1.75
LINC00458-202ENST00000427299 MEX3AA1L020 520 aaKnown RBP4.12□□□□□ -1.75
LINC00458-202ENST00000427299 C7orf77A4D0Y5 90 aa4.12□□□□□ -1.75
LINC00458-202ENST00000427299 RNF212BA8MTL3 300 aa4.12□□□□□ -1.75
LINC00458-202ENST00000427299 ZNF732B4DXR9 585 aa4.12□□□□□ -1.75
LINC00458-202ENST00000427299 TRDCB7Z8K6 153 aa4.12□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 75.5 ms