RNA–Protein interactions for RNA: ENST00000425056.5

GPC1-203, Transcript of glypican 1, humanhuman

TSL 5

Gene GPC1, Length 1,085 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-203ENST00000425056 RGS10O43665 173 aa13.65□□□□□ -0.22
GPC1-203ENST00000425056 GP9P14770 177 aa13.65□□□□□ -0.22
GPC1-203ENST00000425056 CALRP27797 417 aaKnown RBP13.65□□□□□ -0.22
GPC1-203ENST00000425056 CD40LGP29965 261 aa13.65□□□□□ -0.22
GPC1-203ENST00000425056 SERPINB10P48595 397 aa13.65□□□□□ -0.22
GPC1-203ENST00000425056 LINC00205P59089 165 aa13.65□□□□□ -0.22
GPC1-203ENST00000425056 RPS16P62249 146 aaKnown RBP13.65□□□□□ -0.22
GPC1-203ENST00000425056 PITPNAQ00169 270 aa13.65□□□□□ -0.22
GPC1-203ENST00000425056 SBSPONQ8IVN8 264 aa13.65□□□□□ -0.22
GPC1-203ENST00000425056 RHOVQ96L33 236 aa13.65□□□□□ -0.22
GPC1-203ENST00000425056 MS4A10Q96PG2 267 aa13.65□□□□□ -0.22
GPC1-203ENST00000425056 H3BUA1 57 aa13.64□□□□□ -0.23
GPC1-203ENST00000425056 M0R1X1 148 aa13.64□□□□□ -0.23
GPC1-203ENST00000425056 SLC25A17O43808 307 aa13.64□□□□□ -0.23
GPC1-203ENST00000425056 RANBP1P43487 201 aa13.64□□□□□ -0.23
GPC1-203ENST00000425056 SSBP2P81877 361 aaPredicted RBP13.64□□□□□ -0.23
GPC1-203ENST00000425056 FABP5Q01469 135 aa13.64□□□□□ -0.23
GPC1-203ENST00000425056 FXYD3Q14802 87 aa13.64□□□□□ -0.23
GPC1-203ENST00000425056 C2orf76Q3KRA6 126 aa13.64□□□□□ -0.23
GPC1-203ENST00000425056 OR4A4PQ8NGN8 299 aa13.64□□□□□ -0.23
GPC1-203ENST00000425056 GRPEL2Q8TAA5 225 aa13.64□□□□□ -0.23
GPC1-203ENST00000425056 CABLES2Q9BTV7 478 aa13.64□□□□□ -0.23
GPC1-203ENST00000425056 SLC35D1Q9NTN3 355 aa13.64□□□□□ -0.23
GPC1-203ENST00000425056 KCNK7Q9Y2U2 307 aa13.64□□□□□ -0.23
GPC1-203ENST00000425056 V9GY05 133 aa13.64□□□□□ -0.23
GPC1-203ENST00000425056 TMEM272A0A1B0GTI8 110 aa13.63□□□□□ -0.23
GPC1-203ENST00000425056 FABP7O15540 132 aa13.63□□□□□ -0.23
GPC1-203ENST00000425056 DENRO43583 198 aaKnown RBP13.63□□□□□ -0.23
GPC1-203ENST00000425056 TRGV3P03979 118 aa13.63□□□□□ -0.23
GPC1-203ENST00000425056 FRMD6-AS1P0C7T7 363 aa13.63□□□□□ -0.23
GPC1-203ENST00000425056 PLA2G7Q13093 441 aa13.63□□□□□ -0.23
GPC1-203ENST00000425056 PRSS48Q7RTY5 328 aa13.63□□□□□ -0.23
GPC1-203ENST00000425056 POC5Q8NA72 575 aa13.63□□□□□ -0.23
GPC1-203ENST00000425056 RCHY1Q96PM5 261 aa13.63□□□□□ -0.23
GPC1-203ENST00000425056 MGLLQ99685 303 aa13.63□□□□□ -0.23
GPC1-203ENST00000425056 ACOT13Q9NPJ3 140 aa13.63□□□□□ -0.23
GPC1-203ENST00000425056 TRIM64CA6NLI5 447 aa13.62□□□□□ -0.23
GPC1-203ENST00000425056 DIRAS3O95661 229 aa13.62□□□□□ -0.23
GPC1-203ENST00000425056 IGLV2-23P01705 113 aa13.62□□□□□ -0.23
GPC1-203ENST00000425056 FCGR3AP08637 254 aa13.62□□□□□ -0.23
GPC1-203ENST00000425056 CRHBPP24387 322 aa13.62□□□□□ -0.23
GPC1-203ENST00000425056 PSMD7P51665 324 aa13.62□□□□□ -0.23
GPC1-203ENST00000425056 OVCH2Q7RTZ1 564 aa13.62□□□□□ -0.23
GPC1-203ENST00000425056 OR4C12Q96R67 309 aa13.62□□□□□ -0.23
GPC1-203ENST00000425056 CCDC90BQ9GZT6 254 aa13.62□□□□□ -0.23
GPC1-203ENST00000425056 OR2D2Q9H210 308 aa13.62□□□□□ -0.23
GPC1-203ENST00000425056 RAB22AQ9UL26 194 aa13.62□□□□□ -0.23
GPC1-203ENST00000425056 CRYGBP07316 175 aa13.61□□□□□ -0.23
GPC1-203ENST00000425056 CD3GP09693 182 aa13.61□□□□□ -0.23
GPC1-203ENST00000425056 LGALS7P47929 136 aa13.61□□□□□ -0.23
GPC1-203ENST00000425056 MRPS15P82914 257 aaKnown RBP13.61□□□□□ -0.23
GPC1-203ENST00000425056 TBCEQ15813 527 aaPredicted RBP13.61□□□□□ -0.23
GPC1-203ENST00000425056 MOGAT2Q3SYC2 334 aa13.61□□□□□ -0.23
GPC1-203ENST00000425056 HES5Q5TA89 166 aa13.61□□□□□ -0.23
GPC1-203ENST00000425056 RAB3CQ96E17 227 aa13.61□□□□□ -0.23
GPC1-203ENST00000425056 CNBD2Q96M20 576 aa13.61□□□□□ -0.23
GPC1-203ENST00000425056 HARBI1Q96MB7 349 aa13.61□□□□□ -0.23
GPC1-203ENST00000425056 SDHAF2Q9NX18 166 aa13.61□□□□□ -0.23
GPC1-203ENST00000425056 STUB1Q9UNE7 303 aa13.61□□□□□ -0.23
GPC1-203ENST00000425056 DNAH7Q8WXX0 4024 aa13.61□□□□□ -0.23
GPC1-203ENST00000425056 TRBV6-7A0A0A0MS04 114 aa13.6□□□□□ -0.23
GPC1-203ENST00000425056 MFNGO00587 321 aa13.6□□□□□ -0.23
GPC1-203ENST00000425056 BET1O15155 118 aa13.6□□□□□ -0.23
GPC1-203ENST00000425056 BRI3O95415 125 aa13.6□□□□□ -0.23
GPC1-203ENST00000425056 IGLV1-51P01701 117 aa13.6□□□□□ -0.23
GPC1-203ENST00000425056 ZP3P21754 424 aa13.6□□□□□ -0.23
GPC1-203ENST00000425056 MAP2K4P45985 399 aa13.6□□□□□ -0.23
GPC1-203ENST00000425056 PJVKQ0ZLH3 352 aa13.6□□□□□ -0.23
GPC1-203ENST00000425056 IGSF11Q5DX21 431 aa13.6□□□□□ -0.23
GPC1-203ENST00000425056 OR10J5Q8NHC4 309 aa13.6□□□□□ -0.23
GPC1-203ENST00000425056 MUC7Q8TAX7 377 aa13.6□□□□□ -0.23
GPC1-203ENST00000425056 C5orf30Q96GV9 206 aa13.6□□□□□ -0.23
GPC1-203ENST00000425056 TMEM68Q96MH6 324 aa13.6□□□□□ -0.23
GPC1-203ENST00000425056 ELOVL1Q9BW60 279 aa13.6□□□□□ -0.23
GPC1-203ENST00000425056 RANGRFQ9HD47 186 aaPredicted RBP13.6□□□□□ -0.23
GPC1-203ENST00000425056 A0A0G2JLM5 398 aa13.59□□□□□ -0.23
GPC1-203ENST00000425056 C13orf42A0A1B0GVH6 325 aa13.59□□□□□ -0.23
GPC1-203ENST00000425056 CNIH1O95406 144 aa13.59□□□□□ -0.23
GPC1-203ENST00000425056 GSTT2P0CG29 244 aa13.59□□□□□ -0.23
GPC1-203ENST00000425056 GSTT2BP0CG30 244 aa13.59□□□□□ -0.23
GPC1-203ENST00000425056 TAGLNQ01995 201 aaKnown RBP13.59□□□□□ -0.23
GPC1-203ENST00000425056 SSX1Q16384 188 aa13.59□□□□□ -0.23
GPC1-203ENST00000425056 TMEM177Q53S58 311 aa13.59□□□□□ -0.23
GPC1-203ENST00000425056 HAPLN4Q86UW8 402 aa13.59□□□□□ -0.23
GPC1-203ENST00000425056 OR5T1Q8NG75 326 aa13.59□□□□□ -0.23
GPC1-203ENST00000425056 OR10R2Q8NGX6 335 aa13.59□□□□□ -0.23
GPC1-203ENST00000425056 ZNF355PQ9NSJ1 428 aa13.59□□□□□ -0.23
GPC1-203ENST00000425056 TRAV1-2A0A0B4J238 106 aa13.58□□□□□ -0.24
GPC1-203ENST00000425056 SHISA3A0PJX4 238 aa13.58□□□□□ -0.24
GPC1-203ENST00000425056 IFITM5A6NNB3 132 aa13.58□□□□□ -0.24
GPC1-203ENST00000425056 RAB27BO00194 218 aa13.58□□□□□ -0.24
GPC1-203ENST00000425056 PDCD5O14737 125 aa13.58□□□□□ -0.24
GPC1-203ENST00000425056 HIST1H1DP16402 221 aaKnown RBP13.58□□□□□ -0.24
GPC1-203ENST00000425056 GNB3P16520 340 aa13.58□□□□□ -0.24
GPC1-203ENST00000425056 RAB6AP20340 208 aa13.58□□□□□ -0.24
GPC1-203ENST00000425056 GADD45AP24522 165 aa13.58□□□□□ -0.24
GPC1-203ENST00000425056 OR10A3P58181 314 aa13.58□□□□□ -0.24
GPC1-203ENST00000425056 CBX3Q13185 183 aa13.58□□□□□ -0.24
GPC1-203ENST00000425056 SRSF7Q16629 238 aaKnown RBP eCLIP13.58□□□□□ -0.24
GPC1-203ENST00000425056 ZNF367Q7RTV3 350 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 106 ms