RNA–Protein interactions for RNA: ENST00000409470.5

USP39-203, Transcript of ubiquitin specific peptidase 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP39, Length 2,034 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-203ENST00000409470 TANC2Q9HCD6 1990 aa17.11■□□□□ 0.33
USP39-203ENST00000409470 DSCAML1Q8TD84 2053 aa17.11■□□□□ 0.33
USP39-203ENST00000409470 hADV38S2A0JD32 116 aa17.11■□□□□ 0.33
USP39-203ENST00000409470 B9A039 149 aa17.11■□□□□ 0.33
USP39-203ENST00000409470 RAB29O14966 203 aa17.11■□□□□ 0.33
USP39-203ENST00000409470 CAMLGP49069 296 aa17.11■□□□□ 0.33
USP39-203ENST00000409470 TNFRSF9Q07011 255 aa17.11■□□□□ 0.33
USP39-203ENST00000409470 LY6DQ14210 128 aa17.11■□□□□ 0.33
USP39-203ENST00000409470 EFNB3Q15768 340 aa17.11■□□□□ 0.33
USP39-203ENST00000409470 UTF1Q5T230 341 aa17.11■□□□□ 0.33
USP39-203ENST00000409470 BTNL8Q6UX41 500 aa17.11■□□□□ 0.33
USP39-203ENST00000409470 TMEM182Q6ZP80 229 aaPredicted RBP17.11■□□□□ 0.33
USP39-203ENST00000409470 CA5BP1Q8WTZ4 195 aa17.11■□□□□ 0.33
USP39-203ENST00000409470 ATP5SQ99766 215 aa17.11■□□□□ 0.33
USP39-203ENST00000409470 CISD1Q9NZ45 108 aaKnown RBP17.11■□□□□ 0.33
USP39-203ENST00000409470 PKDREJQ9NTG1 2253 aa17.1■□□□□ 0.33
USP39-203ENST00000409470 ATRXP46100 2492 aa17.1■□□□□ 0.33
USP39-203ENST00000409470 A0A1W2PPE3 182 aa17.1■□□□□ 0.33
USP39-203ENST00000409470 ITGB1BP1O14713 200 aa17.1■□□□□ 0.33
USP39-203ENST00000409470 RBMXL2O75526 392 aaKnown RBP17.1■□□□□ 0.33
USP39-203ENST00000409470 APOC3P02656 99 aa17.1■□□□□ 0.33
USP39-203ENST00000409470 ATP6V0CP27449 155 aa17.1■□□□□ 0.33
USP39-203ENST00000409470 ID4P47928 161 aa17.1■□□□□ 0.33
USP39-203ENST00000409470 RAB5CP51148 216 aa17.1■□□□□ 0.33
USP39-203ENST00000409470 TAS2R30P59541 319 aa17.1■□□□□ 0.33
USP39-203ENST00000409470 MIDNQ504T8 468 aa17.1■□□□□ 0.33
USP39-203ENST00000409470 CORO2AQ92828 525 aa17.1■□□□□ 0.33
USP39-203ENST00000409470 RBKSQ9H477 322 aa17.1■□□□□ 0.33
USP39-203ENST00000409470 CACFD1Q9UGQ2 172 aa17.1■□□□□ 0.33
USP39-203ENST00000409470 DFFBO76075 338 aa17.09■□□□□ 0.33
USP39-203ENST00000409470 METTL15P1P0C7V9 234 aa17.09■□□□□ 0.33
USP39-203ENST00000409470 ZNF616Q08AN1 781 aa17.09■□□□□ 0.33
USP39-203ENST00000409470 CT45A1Q5HYN5 189 aa17.09■□□□□ 0.33
USP39-203ENST00000409470 OR2G3Q8NGZ4 309 aa17.09■□□□□ 0.33
USP39-203ENST00000409470 CT45A3Q8NHU0 189 aa17.09■□□□□ 0.33
USP39-203ENST00000409470 R3HDM4Q96D70 268 aa17.09■□□□□ 0.33
USP39-203ENST00000409470 TREM1Q9NP99 234 aa17.09■□□□□ 0.33
USP39-203ENST00000409470 HSPB7Q9UBY9 170 aa17.09■□□□□ 0.33
USP39-203ENST00000409470 PRELID3BQ9Y3B1 194 aa17.09■□□□□ 0.33
USP39-203ENST00000409470 ZZEF1O43149 2961 aa17.09■□□□□ 0.33
USP39-203ENST00000409470 MARCH11A6NNE9 402 aa17.09■□□□□ 0.33
USP39-203ENST00000409470 AGPAT2O15120 278 aa17.09■□□□□ 0.33
USP39-203ENST00000409470 SFTPCP11686 197 aa17.09■□□□□ 0.33
USP39-203ENST00000409470 SRSF3P84103 164 aaKnown RBP17.09■□□□□ 0.33
USP39-203ENST00000409470 SPANXN5Q5MJ07 72 aa17.09■□□□□ 0.33
USP39-203ENST00000409470 PRORYQ9H606 182 aa17.09■□□□□ 0.33
USP39-203ENST00000409470 STRAPQ9Y3F4 350 aaKnown RBP17.09■□□□□ 0.33
USP39-203ENST00000409470 C1QL1O75973 258 aa17.08■□□□□ 0.33
USP39-203ENST00000409470 HPRT1P00492 218 aa17.08■□□□□ 0.33
USP39-203ENST00000409470 CDSNQ15517 529 aa17.08■□□□□ 0.33
USP39-203ENST00000409470 PRAMEF5Q5TYX0 476 aa17.08■□□□□ 0.33
USP39-203ENST00000409470 SLC25A24Q6NUK1 477 aa17.08■□□□□ 0.33
USP39-203ENST00000409470 S1PR3Q99500 378 aa17.08■□□□□ 0.33
USP39-203ENST00000409470 TMEM231Q9H6L2 316 aa17.08■□□□□ 0.33
USP39-203ENST00000409470 LINC00312Q9Y6C7 94 aa17.08■□□□□ 0.33
USP39-203ENST00000409470 NCOR2Q9Y618 2525 aa17.08■□□□□ 0.32
USP39-203ENST00000409470 TMEM218A2RU14 115 aa17.08■□□□□ 0.32
USP39-203ENST00000409470 IFNA5P01569 189 aa17.08■□□□□ 0.32
USP39-203ENST00000409470 FHITP49789 147 aa17.08■□□□□ 0.32
USP39-203ENST00000409470 GNG10P50151 68 aa17.08■□□□□ 0.32
USP39-203ENST00000409470 RPL31P62899 125 aaKnown RBP17.08■□□□□ 0.32
USP39-203ENST00000409470 TMEM30BQ3MIR4 351 aa17.08■□□□□ 0.32
USP39-203ENST00000409470 GNPNAT1Q96EK6 184 aaPredicted RBP17.08■□□□□ 0.32
USP39-203ENST00000409470 LINC00574Q9H8X3 128 aa17.08■□□□□ 0.32
USP39-203ENST00000409470 C19orf12Q9NSK7 152 aa17.08■□□□□ 0.32
USP39-203ENST00000409470 GAB2Q9UQC2 676 aa17.08■□□□□ 0.32
USP39-203ENST00000409470 RFNGQ9Y644 331 aa17.08■□□□□ 0.32
USP39-203ENST00000409470 CHD8Q9HCK8 2581 aa17.08■□□□□ 0.32
USP39-203ENST00000409470 TSPAN15O95858 294 aa17.07■□□□□ 0.32
USP39-203ENST00000409470 LYG1Q8N1E2 194 aa17.07■□□□□ 0.32
USP39-203ENST00000409470 MS4A7Q9GZW8 240 aaPredicted RBP17.07■□□□□ 0.32
USP39-203ENST00000409470 TMA7Q9Y2S6 64 aaKnown RBP17.07■□□□□ 0.32
USP39-203ENST00000409470 SAA2-SAA4A0A096LPE2 208 aa17.06■□□□□ 0.32
USP39-203ENST00000409470 IGHV1-69-2A0A0G2JMI3 117 aa17.06■□□□□ 0.32
USP39-203ENST00000409470 NDUFB3O43676 98 aa17.06■□□□□ 0.32
USP39-203ENST00000409470 MMP23AO75900 390 aa17.06■□□□□ 0.32
USP39-203ENST00000409470 SAA2P0DJI9 122 aaPredicted RBP17.06■□□□□ 0.32
USP39-203ENST00000409470 KIR2DS2P43631 304 aa17.06■□□□□ 0.32
USP39-203ENST00000409470 HBG1P69891 147 aa17.06■□□□□ 0.32
USP39-203ENST00000409470 HBG2P69892 147 aa17.06■□□□□ 0.32
USP39-203ENST00000409470 DEFA5Q01523 94 aa17.06■□□□□ 0.32
USP39-203ENST00000409470 MEF2CQ06413 473 aaPredicted RBP17.06■□□□□ 0.32
USP39-203ENST00000409470 ZNF436-AS1Q8NC38 126 aaPredicted RBP17.06■□□□□ 0.32
USP39-203ENST00000409470 FAM213BQ8TBF2 198 aa17.06■□□□□ 0.32
USP39-203ENST00000409470 GAL3ST2Q9H3Q3 398 aa17.06■□□□□ 0.32
USP39-203ENST00000409470 TRIM77I1YAP6 450 aa17.06■□□□□ 0.32
USP39-203ENST00000409470 SIAH2O43255 324 aa17.06■□□□□ 0.32
USP39-203ENST00000409470 MRPS11P82912 194 aaKnown RBP17.06■□□□□ 0.32
USP39-203ENST00000409470 RUNX1Q01196 453 aa17.06■□□□□ 0.32
USP39-203ENST00000409470 ZNF273Q14593 569 aa17.06■□□□□ 0.32
USP39-203ENST00000409470 MUC15Q8N387 334 aa17.06■□□□□ 0.32
USP39-203ENST00000409470 LYPD6BQ8NI32 183 aa17.06■□□□□ 0.32
USP39-203ENST00000409470 H1FXQ92522 213 aaKnown RBP17.06■□□□□ 0.32
USP39-203ENST00000409470 TSNAXQ99598 290 aaKnown RBP17.06■□□□□ 0.32
USP39-203ENST00000409470 RPUSD1Q9UJJ7 312 aaKnown RBP17.06■□□□□ 0.32
USP39-203ENST00000409470 FAM96BQ9Y3D0 163 aa17.06■□□□□ 0.32
USP39-203ENST00000409470 SMG1Q96Q15 3661 aaKnown RBP17.06■□□□□ 0.32
USP39-203ENST00000409470 RBFOX2O43251 390 aaKnown RBP eCLIP17.05■□□□□ 0.32
USP39-203ENST00000409470 ARHGDIBP52566 201 aa17.05■□□□□ 0.32
USP39-203ENST00000409470 ERVK-16P61578 105 aa17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms