RNA–Protein interactions for RNA: ENST00000397537.2

SMCO1-201, Transcript of single-pass membrane protein with coiled-coil domains 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCO1, Length 1,812 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO1-201ENST00000397537 CXCL17Q6UXB2 119 aa5.33□□□□□ -1.56
SMCO1-201ENST00000397537 CALHM3Q86XJ0 350 aa5.33□□□□□ -1.56
SMCO1-201ENST00000397537 COX18Q8N8Q8 333 aa5.33□□□□□ -1.56
SMCO1-201ENST00000397537 SECTM1Q8WVN6 248 aa5.33□□□□□ -1.56
SMCO1-201ENST00000397537 SMARCD1Q96GM5 515 aa5.33□□□□□ -1.56
SMCO1-201ENST00000397537 LINC00477Q96M19 166 aa5.33□□□□□ -1.56
SMCO1-201ENST00000397537 TP53RKQ96S44 253 aa5.33□□□□□ -1.56
SMCO1-201ENST00000397537 A0A087WWV3 80 aa5.32□□□□□ -1.56
SMCO1-201ENST00000397537 IGHV3-38A0A0C4DH36 116 aa5.32□□□□□ -1.56
SMCO1-201ENST00000397537 TEX48A0A1B0GUV7 120 aa5.32□□□□□ -1.56
SMCO1-201ENST00000397537 ARL5CA6NH57 179 aa5.32□□□□□ -1.56
SMCO1-201ENST00000397537 C12orf77C9JDV5 145 aa5.32□□□□□ -1.56
SMCO1-201ENST00000397537 K7EQD1 137 aa5.32□□□□□ -1.56
SMCO1-201ENST00000397537 K7EQG2 157 aa5.32□□□□□ -1.56
SMCO1-201ENST00000397537 CCL25O15444 150 aa5.32□□□□□ -1.56
SMCO1-201ENST00000397537 MPC2O95563 127 aa5.32□□□□□ -1.56
SMCO1-201ENST00000397537 MOSP00540 346 aa5.32□□□□□ -1.56
SMCO1-201ENST00000397537 MRPL3P09001 348 aaKnown RBP5.32□□□□□ -1.56
SMCO1-201ENST00000397537 OR13C7P0DN81 318 aa5.32□□□□□ -1.56
SMCO1-201ENST00000397537 HIST1H3AP68431 136 aa5.32□□□□□ -1.56
SMCO1-201ENST00000397537 H3F3AP84243 136 aa5.32□□□□□ -1.56
SMCO1-201ENST00000397537 PAGE3Q5JUK9 113 aa5.32□□□□□ -1.56
SMCO1-201ENST00000397537 CLEC12AQ5QGZ9 265 aa5.32□□□□□ -1.56
SMCO1-201ENST00000397537 ZNF613Q6PF04 617 aa5.32□□□□□ -1.56
SMCO1-201ENST00000397537 HIST2H3AQ71DI3 136 aa5.32□□□□□ -1.56
SMCO1-201ENST00000397537 PPP1R27Q86WC6 154 aa5.32□□□□□ -1.56
SMCO1-201ENST00000397537 DOLPP1Q86YN1 238 aa5.32□□□□□ -1.56
SMCO1-201ENST00000397537 OR13C6PQ8NH95 151 aa5.32□□□□□ -1.56
SMCO1-201ENST00000397537 ZNF747Q9BV97 191 aa5.32□□□□□ -1.56
SMCO1-201ENST00000397537 COMMD3Q9UBI1 195 aa5.32□□□□□ -1.56
SMCO1-201ENST00000397537 KCNE3Q9Y6H6 103 aa5.32□□□□□ -1.56
SMCO1-201ENST00000397537 SPTA1P02549 2419 aa5.32□□□□□ -1.56
SMCO1-201ENST00000397537 IGLV5-39A0A0G2JS06 123 aa5.32□□□□□ -1.56
SMCO1-201ENST00000397537 TMEM269A0A1B0GVZ9 245 aa5.32□□□□□ -1.56
SMCO1-201ENST00000397537 NKX2-6A6NCS4 301 aa5.32□□□□□ -1.56
SMCO1-201ENST00000397537 CORTO00230 105 aa5.32□□□□□ -1.56
SMCO1-201ENST00000397537 GALR3O60755 368 aaPredicted RBP5.32□□□□□ -1.56
SMCO1-201ENST00000397537 CRLF1O75462 422 aa5.32□□□□□ -1.56
SMCO1-201ENST00000397537 IGHG1P01857 330 aa5.32□□□□□ -1.56
SMCO1-201ENST00000397537 IL3P08700 152 aa5.32□□□□□ -1.56
SMCO1-201ENST00000397537 OR5AC1P0C628 307 aa5.32□□□□□ -1.56
SMCO1-201ENST00000397537 OR5H8P0DN80 308 aa5.32□□□□□ -1.56
SMCO1-201ENST00000397537 TCN2P20062 427 aa5.32□□□□□ -1.56
SMCO1-201ENST00000397537 PIGPP57054 158 aa5.32□□□□□ -1.56
SMCO1-201ENST00000397537 SLC35A2P78381 396 aa5.32□□□□□ -1.56
SMCO1-201ENST00000397537 CAV1Q03135 178 aa5.32□□□□□ -1.56
SMCO1-201ENST00000397537 SNRNP35Q16560 246 aaKnown RBP5.32□□□□□ -1.56
SMCO1-201ENST00000397537 WDR38Q5JTN6 314 aa5.32□□□□□ -1.56
SMCO1-201ENST00000397537 NEGR1Q7Z3B1 354 aa5.32□□□□□ -1.56
SMCO1-201ENST00000397537 C6orf120Q7Z4R8 191 aa5.32□□□□□ -1.56
SMCO1-201ENST00000397537 LRRTM1Q86UE6 522 aa5.32□□□□□ -1.56
SMCO1-201ENST00000397537 C9orf40Q8IXQ3 194 aa5.32□□□□□ -1.56
SMCO1-201ENST00000397537 CHST4Q8NCG5 386 aa5.32□□□□□ -1.56
SMCO1-201ENST00000397537 OR10AD1Q8NGE0 317 aa5.32□□□□□ -1.56
SMCO1-201ENST00000397537 OR10D4PQ8NGN7 298 aa5.32□□□□□ -1.56
SMCO1-201ENST00000397537 RDH12Q96NR8 316 aa5.32□□□□□ -1.56
SMCO1-201ENST00000397537 PITX2Q99697 317 aa5.32□□□□□ -1.56
SMCO1-201ENST00000397537 CROCCQ5TZA2 2017 aa5.31□□□□□ -1.56
SMCO1-201ENST00000397537 ADAMTS20P59510 1910 aa5.31□□□□□ -1.56
SMCO1-201ENST00000397537 TANC1Q9C0D5 1861 aa5.31□□□□□ -1.56
SMCO1-201ENST00000397537 MEIKINA0A087WXM9 373 aa5.31□□□□□ -1.56
SMCO1-201ENST00000397537 A0A0G2JN53 185 aa5.31□□□□□ -1.56
SMCO1-201ENST00000397537 OR5H1A6NKK0 313 aa5.31□□□□□ -1.56
SMCO1-201ENST00000397537 MMP23AO75900 390 aa5.31□□□□□ -1.56
SMCO1-201ENST00000397537 RENP00797 406 aa5.31□□□□□ -1.56
SMCO1-201ENST00000397537 PMP2P02689 132 aa5.31□□□□□ -1.56
SMCO1-201ENST00000397537 APODP05090 189 aa5.31□□□□□ -1.56
SMCO1-201ENST00000397537 CXCL2P19875 107 aa5.31□□□□□ -1.56
SMCO1-201ENST00000397537 APLNRP35414 380 aa5.31□□□□□ -1.56
SMCO1-201ENST00000397537 SELENOPP49908 381 aa5.31□□□□□ -1.56
SMCO1-201ENST00000397537 MTPNP58546 118 aa5.31□□□□□ -1.56
SMCO1-201ENST00000397537 ERVK-16P61578 105 aa5.31□□□□□ -1.56
SMCO1-201ENST00000397537 IHHQ14623 411 aa5.31□□□□□ -1.56
SMCO1-201ENST00000397537 HERPUD1Q15011 391 aa5.31□□□□□ -1.56
SMCO1-201ENST00000397537 RHEBQ15382 184 aa5.31□□□□□ -1.56
SMCO1-201ENST00000397537 ZNF684Q5T5D7 378 aa5.31□□□□□ -1.56
SMCO1-201ENST00000397537 KLHDC8BQ8IXV7 354 aa5.31□□□□□ -1.56
SMCO1-201ENST00000397537 ZNF614Q8N883 585 aa5.31□□□□□ -1.56
SMCO1-201ENST00000397537 ZNF485Q8NCK3 441 aa5.31□□□□□ -1.56
SMCO1-201ENST00000397537 MPLKIPQ8TAP9 179 aa5.31□□□□□ -1.56
SMCO1-201ENST00000397537 GALMQ96C23 342 aa5.31□□□□□ -1.56
SMCO1-201ENST00000397537 AURKBQ96GD4 344 aaPredicted RBP5.31□□□□□ -1.56
SMCO1-201ENST00000397537 MARVELD1Q9BSK0 173 aa5.31□□□□□ -1.56
SMCO1-201ENST00000397537 SEC11CQ9BY50 192 aa5.31□□□□□ -1.56
SMCO1-201ENST00000397537 MED28Q9H204 178 aa5.31□□□□□ -1.56
SMCO1-201ENST00000397537 ISG20L2Q9H9L3 353 aaKnown RBP5.31□□□□□ -1.56
SMCO1-201ENST00000397537 MTFP1Q9UDX5 166 aa5.31□□□□□ -1.56
SMCO1-201ENST00000397537 ORC6Q9Y5N6 252 aa5.31□□□□□ -1.56
SMCO1-201ENST00000397537 DOPEY1Q5JWR5 2465 aa5.31□□□□□ -1.56
SMCO1-201ENST00000397537 AKAP13Q12802 2813 aa5.31□□□□□ -1.56
SMCO1-201ENST00000397537 FER1L5A0AVI2 2057 aa5.31□□□□□ -1.56
SMCO1-201ENST00000397537 A0A1B0GXF2 115 aa5.3□□□□□ -1.56
SMCO1-201ENST00000397537 PHOX2AO14813 284 aa5.3□□□□□ -1.56
SMCO1-201ENST00000397537 MFSD11O43934 449 aa5.3□□□□□ -1.56
SMCO1-201ENST00000397537 OR7C2O60412 319 aa5.3□□□□□ -1.56
SMCO1-201ENST00000397537 REM1O75628 298 aa5.3□□□□□ -1.56
SMCO1-201ENST00000397537 C1QL1O75973 258 aa5.3□□□□□ -1.56
SMCO1-201ENST00000397537 FABP3P05413 133 aa5.3□□□□□ -1.56
SMCO1-201ENST00000397537 GKN3PP0CG01 181 aa5.3□□□□□ -1.56
SMCO1-201ENST00000397537 CD79AP11912 226 aa5.3□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms