RNA–Protein interactions for RNA: ENST00000395794.2

CXCL12-205, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 1 (best) BASIC

Gene CXCL12, Length 1,052 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-205ENST00000395794 KLK15Q9H2R5 256 aa10.73□□□□□ -0.69
CXCL12-205ENST00000395794 ZNF230Q9UIE0 474 aaPredicted RBP10.73□□□□□ -0.69
CXCL12-205ENST00000395794 FOXA2Q9Y261 457 aaPredicted RBP10.73□□□□□ -0.69
CXCL12-205ENST00000395794 TRBV6-7A0A0A0MS04 114 aa10.72□□□□□ -0.69
CXCL12-205ENST00000395794 K7EIL1 84 aa10.72□□□□□ -0.69
CXCL12-205ENST00000395794 RAMP3O60896 148 aa10.72□□□□□ -0.69
CXCL12-205ENST00000395794 IGKV1-16P04430 117 aa10.72□□□□□ -0.69
CXCL12-205ENST00000395794 OR8U8P0C7N1 319 aa10.72□□□□□ -0.69
CXCL12-205ENST00000395794 PITPNAQ00169 270 aa10.72□□□□□ -0.69
CXCL12-205ENST00000395794 TAGLNQ01995 201 aaKnown RBP10.72□□□□□ -0.69
CXCL12-205ENST00000395794 CDNFQ49AH0 187 aa10.72□□□□□ -0.69
CXCL12-205ENST00000395794 C9orf66Q5T8R8 295 aa10.72□□□□□ -0.69
CXCL12-205ENST00000395794 PYHIN1Q6K0P9 492 aa10.72□□□□□ -0.69
CXCL12-205ENST00000395794 ZNF562Q6V9R5 426 aa10.72□□□□□ -0.69
CXCL12-205ENST00000395794 ZNF491Q8N8L2 437 aa10.72□□□□□ -0.69
CXCL12-205ENST00000395794 ZNF383Q8NA42 475 aa10.72□□□□□ -0.69
CXCL12-205ENST00000395794 MINDY2Q8NBR6 621 aa10.72□□□□□ -0.69
CXCL12-205ENST00000395794 OR1N2Q8NGR9 330 aa10.72□□□□□ -0.69
CXCL12-205ENST00000395794 OR5B12Q96R08 314 aa10.72□□□□□ -0.69
CXCL12-205ENST00000395794 CABLES2Q9BTV7 478 aa10.72□□□□□ -0.69
CXCL12-205ENST00000395794 TOLLIPQ9H0E2 274 aa10.72□□□□□ -0.69
CXCL12-205ENST00000395794 SLC35D1Q9NTN3 355 aa10.72□□□□□ -0.69
CXCL12-205ENST00000395794 DAPK2Q9UIK4 370 aa10.72□□□□□ -0.69
CXCL12-205ENST00000395794 GAB2Q9UQC2 676 aa10.72□□□□□ -0.69
CXCL12-205ENST00000395794 RRP15Q9Y3B9 282 aaKnown RBP10.72□□□□□ -0.69
CXCL12-205ENST00000395794 WI2-2373I1.2A0A1W2PRP0 233 aa10.71□□□□□ -0.69
CXCL12-205ENST00000395794 SEC14L6B5MCN3 397 aa10.71□□□□□ -0.69
CXCL12-205ENST00000395794 FCN1O00602 326 aa10.71□□□□□ -0.69
CXCL12-205ENST00000395794 PROP1O75360 226 aa10.71□□□□□ -0.69
CXCL12-205ENST00000395794 CNIH1O95406 144 aa10.71□□□□□ -0.69
CXCL12-205ENST00000395794 DTYMKP23919 212 aa10.71□□□□□ -0.69
CXCL12-205ENST00000395794 LGALS7P47929 136 aa10.71□□□□□ -0.69
CXCL12-205ENST00000395794 ZNF616Q08AN1 781 aa10.71□□□□□ -0.69
CXCL12-205ENST00000395794 RTL8BQ17RB0 113 aa10.71□□□□□ -0.69
CXCL12-205ENST00000395794 ACTBL2Q562R1 376 aa10.71□□□□□ -0.69
CXCL12-205ENST00000395794 UNQ5815/PRO19632Q6UWF5 114 aa10.71□□□□□ -0.69
CXCL12-205ENST00000395794 NR2C2APQ86WQ0 139 aa10.71□□□□□ -0.69
CXCL12-205ENST00000395794 MYOZ3Q8TDC0 251 aa10.71□□□□□ -0.69
CXCL12-205ENST00000395794 ST6GALNAC5Q9BVH7 336 aa10.71□□□□□ -0.69
CXCL12-205ENST00000395794 GNB4Q9HAV0 340 aa10.71□□□□□ -0.69
CXCL12-205ENST00000395794 SDHAF2Q9NX18 166 aa10.71□□□□□ -0.69
CXCL12-205ENST00000395794 LOC100506127A0A0U1RQW1 187 aa10.7□□□□□ -0.7
CXCL12-205ENST00000395794 SLC25A17O43808 307 aa10.7□□□□□ -0.7
CXCL12-205ENST00000395794 CA2P00918 260 aa10.7□□□□□ -0.7
CXCL12-205ENST00000395794 CTXN2P0C2S0 81 aa10.7□□□□□ -0.7
CXCL12-205ENST00000395794 RRASP10301 218 aa10.7□□□□□ -0.7
CXCL12-205ENST00000395794 CRIP2P52943 208 aaPredicted RBP10.7□□□□□ -0.7
CXCL12-205ENST00000395794 LINC00205P59089 165 aa10.7□□□□□ -0.7
CXCL12-205ENST00000395794 GNG2P59768 71 aa10.7□□□□□ -0.7
CXCL12-205ENST00000395794 PRR20EP86478 221 aa10.7□□□□□ -0.7
CXCL12-205ENST00000395794 PRR20CP86479 221 aa10.7□□□□□ -0.7
CXCL12-205ENST00000395794 PRR20DP86480 221 aa10.7□□□□□ -0.7
CXCL12-205ENST00000395794 PRR20BP86481 221 aa10.7□□□□□ -0.7
CXCL12-205ENST00000395794 PRR20AP86496 221 aa10.7□□□□□ -0.7
CXCL12-205ENST00000395794 NDPQ00604 133 aa10.7□□□□□ -0.7
CXCL12-205ENST00000395794 RUNX1Q01196 453 aa10.7□□□□□ -0.7
CXCL12-205ENST00000395794 NEDD8Q15843 81 aa10.7□□□□□ -0.7
CXCL12-205ENST00000395794 AKIRIN2Q53H80 203 aa10.7□□□□□ -0.7
CXCL12-205ENST00000395794 HACD4Q5VWC8 232 aa10.7□□□□□ -0.7
CXCL12-205ENST00000395794 SFXN4Q6P4A7 337 aa10.7□□□□□ -0.7
CXCL12-205ENST00000395794 Q6ZS49 121 aa10.7□□□□□ -0.7
CXCL12-205ENST00000395794 ARPC1AQ92747 370 aa10.7□□□□□ -0.7
CXCL12-205ENST00000395794 ADTRPQ96IZ2 230 aa10.7□□□□□ -0.7
CXCL12-205ENST00000395794 OR51E2Q9H255 320 aa10.7□□□□□ -0.7
CXCL12-205ENST00000395794 DCSTAMPQ9H295 470 aa10.7□□□□□ -0.7
CXCL12-205ENST00000395794 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP10.7□□□□□ -0.7
CXCL12-205ENST00000395794 NUBP2Q9Y5Y2 271 aa10.7□□□□□ -0.7
CXCL12-205ENST00000395794 DNAH3Q8TD57 4116 aa10.69□□□□□ -0.7
CXCL12-205ENST00000395794 I3L521 148 aa10.69□□□□□ -0.7
CXCL12-205ENST00000395794 SHOXO15266 292 aa10.69□□□□□ -0.7
CXCL12-205ENST00000395794 SNRPBP14678 240 aaKnown RBP10.69□□□□□ -0.7
CXCL12-205ENST00000395794 SDC2P34741 201 aa10.69□□□□□ -0.7
CXCL12-205ENST00000395794 LUMP51884 338 aaPredicted RBP10.69□□□□□ -0.7
CXCL12-205ENST00000395794 GNB1P62873 340 aa10.69□□□□□ -0.7
CXCL12-205ENST00000395794 MXD1Q05195 221 aa10.69□□□□□ -0.7
CXCL12-205ENST00000395794 FHL3Q13643 280 aa10.69□□□□□ -0.7
CXCL12-205ENST00000395794 FXYD3Q14802 87 aa10.69□□□□□ -0.7
CXCL12-205ENST00000395794 ZNF260Q3ZCT1 412 aa10.69□□□□□ -0.7
CXCL12-205ENST00000395794 KCTD21Q4G0X4 260 aa10.69□□□□□ -0.7
CXCL12-205ENST00000395794 LFNGQ8NES3 379 aa10.69□□□□□ -0.7
CXCL12-205ENST00000395794 GRPEL2Q8TAA5 225 aa10.69□□□□□ -0.7
CXCL12-205ENST00000395794 HARBI1Q96MB7 349 aa10.69□□□□□ -0.7
CXCL12-205ENST00000395794 FAM103A1Q9BTL3 118 aaKnown RBP10.69□□□□□ -0.7
CXCL12-205ENST00000395794 ZNF355PQ9NSJ1 428 aa10.69□□□□□ -0.7
CXCL12-205ENST00000395794 FBXO7Q9Y3I1 522 aa10.69□□□□□ -0.7
CXCL12-205ENST00000395794 EGR2P11161 476 aaPredicted RBP10.68□□□□□ -0.7
CXCL12-205ENST00000395794 CD36P16671 472 aa10.68□□□□□ -0.7
CXCL12-205ENST00000395794 ECI1P42126 302 aa10.68□□□□□ -0.7
CXCL12-205ENST00000395794 INSL3P51460 131 aa10.68□□□□□ -0.7
CXCL12-205ENST00000395794 SCAND1P57086 179 aa10.68□□□□□ -0.7
CXCL12-205ENST00000395794 TPPP2P59282 170 aa10.68□□□□□ -0.7
CXCL12-205ENST00000395794 CD69Q07108 199 aa10.68□□□□□ -0.7
CXCL12-205ENST00000395794 KIAA0141Q14154 515 aaPredicted RBP10.68□□□□□ -0.7
CXCL12-205ENST00000395794 C19orf54Q5BKX5 351 aa10.68□□□□□ -0.7
CXCL12-205ENST00000395794 IDNKQ5T6J7 187 aa10.68□□□□□ -0.7
CXCL12-205ENST00000395794 H1FOOQ8IZA3 346 aaPredicted RBP10.68□□□□□ -0.7
CXCL12-205ENST00000395794 BVESQ8NE79 360 aa10.68□□□□□ -0.7
CXCL12-205ENST00000395794 LGALS14Q8TCE9 139 aa10.68□□□□□ -0.7
CXCL12-205ENST00000395794 CASTOR1Q8WTX7 329 aa10.68□□□□□ -0.7
CXCL12-205ENST00000395794 MS4A10Q96PG2 267 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms