RNA–Protein interactions for RNA: ENST00000380741.8

SMN2-201, Transcript of survival of motor neuron 2, centromeric, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SMN2, Length 900 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-201ENST00000380741 TPBGQ13641 420 aa12.95□□□□□ -0.34
SMN2-201ENST00000380741 FXYD3Q14802 87 aa12.95□□□□□ -0.34
SMN2-201ENST00000380741 SRSF7Q16629 238 aaKnown RBP eCLIP12.95□□□□□ -0.34
SMN2-201ENST00000380741 TRDCB7Z8K6 153 aa12.94□□□□□ -0.34
SMN2-201ENST00000380741 M0R1X1 148 aa12.94□□□□□ -0.34
SMN2-201ENST00000380741 CALRP27797 417 aaKnown RBP12.94□□□□□ -0.34
SMN2-201ENST00000380741 TRAM1Q15629 374 aa12.94□□□□□ -0.34
SMN2-201ENST00000380741 C2orf76Q3KRA6 126 aa12.94□□□□□ -0.34
SMN2-201ENST00000380741 CASC10Q5T4H9 136 aa12.94□□□□□ -0.34
SMN2-201ENST00000380741 POC5Q8NA72 575 aa12.94□□□□□ -0.34
SMN2-201ENST00000380741 OR56B1Q8NGI3 324 aa12.94□□□□□ -0.34
SMN2-201ENST00000380741 FAM3DQ96BQ1 224 aa12.94□□□□□ -0.34
SMN2-201ENST00000380741 DUSP21Q9H596 190 aa12.94□□□□□ -0.34
SMN2-201ENST00000380741 ZNF355PQ9NSJ1 428 aa12.94□□□□□ -0.34
SMN2-201ENST00000380741 SLC35D1Q9NTN3 355 aa12.94□□□□□ -0.34
SMN2-201ENST00000380741 CSMD3Q7Z407 3707 aa12.93□□□□□ -0.34
SMN2-201ENST00000380741 LDLRAD4O15165 306 aa12.93□□□□□ -0.34
SMN2-201ENST00000380741 IGLV2-23P01705 113 aa12.93□□□□□ -0.34
SMN2-201ENST00000380741 CD3GP09693 182 aa12.93□□□□□ -0.34
SMN2-201ENST00000380741 PSMA1P25786 263 aaKnown RBP12.93□□□□□ -0.34
SMN2-201ENST00000380741 AQP4P55087 323 aa12.93□□□□□ -0.34
SMN2-201ENST00000380741 PJVKQ0ZLH3 352 aa12.93□□□□□ -0.34
SMN2-201ENST00000380741 PLA2G7Q13093 441 aa12.93□□□□□ -0.34
SMN2-201ENST00000380741 ZNF436-AS1Q8NC38 126 aaPredicted RBP12.93□□□□□ -0.34
SMN2-201ENST00000380741 OR5T1Q8NG75 326 aa12.93□□□□□ -0.34
SMN2-201ENST00000380741 OR4A4PQ8NGN8 299 aa12.93□□□□□ -0.34
SMN2-201ENST00000380741 RSRP1Q9BUV0 290 aa12.93□□□□□ -0.34
SMN2-201ENST00000380741 ELOVL1Q9BW60 279 aa12.93□□□□□ -0.34
SMN2-201ENST00000380741 NKX1-2Q9UD57 310 aaPredicted RBP12.93□□□□□ -0.34
SMN2-201ENST00000380741 KCNK7Q9Y2U2 307 aa12.93□□□□□ -0.34
SMN2-201ENST00000380741 TPRKBQ9Y3C4 175 aa12.93□□□□□ -0.34
SMN2-201ENST00000380741 STARD9Q9P2P6 4700 aa12.92□□□□□ -0.34
SMN2-201ENST00000380741 TMEM272A0A1B0GTI8 110 aa12.92□□□□□ -0.34
SMN2-201ENST00000380741 C13orf42A0A1B0GVH6 325 aa12.92□□□□□ -0.34
SMN2-201ENST00000380741 ANKRD65E5RJM6 399 aa12.92□□□□□ -0.34
SMN2-201ENST00000380741 H3BUA1 57 aa12.92□□□□□ -0.34
SMN2-201ENST00000380741 FABP7O15540 132 aa12.92□□□□□ -0.34
SMN2-201ENST00000380741 DENRO43583 198 aaKnown RBP12.92□□□□□ -0.34
SMN2-201ENST00000380741 RGS10O43665 173 aa12.92□□□□□ -0.34
SMN2-201ENST00000380741 CNIH1O95406 144 aa12.92□□□□□ -0.34
SMN2-201ENST00000380741 IGLV1-51P01701 117 aa12.92□□□□□ -0.34
SMN2-201ENST00000380741 SERPINB10P48595 397 aa12.92□□□□□ -0.34
SMN2-201ENST00000380741 FABP5Q01469 135 aa12.92□□□□□ -0.34
SMN2-201ENST00000380741 MLLT11Q13015 90 aaPredicted RBP12.92□□□□□ -0.34
SMN2-201ENST00000380741 OR2D2Q9H210 308 aa12.92□□□□□ -0.34
SMN2-201ENST00000380741 ZMAT4Q9H898 229 aa12.92□□□□□ -0.34
SMN2-201ENST00000380741 RANGRFQ9HD47 186 aaPredicted RBP12.92□□□□□ -0.34
SMN2-201ENST00000380741 TENM2Q9NT68 2774 aa12.92□□□□□ -0.34
SMN2-201ENST00000380741 SDHAF2Q9NX18 166 aa12.92□□□□□ -0.34
SMN2-201ENST00000380741 STUB1Q9UNE7 303 aa12.92□□□□□ -0.34
SMN2-201ENST00000380741 V9GY05 133 aa12.92□□□□□ -0.34
SMN2-201ENST00000380741 ANKRD34BA5PLL1 514 aa12.91□□□□□ -0.34
SMN2-201ENST00000380741 BET1O15155 118 aa12.91□□□□□ -0.34
SMN2-201ENST00000380741 CRYGBP07316 175 aa12.91□□□□□ -0.34
SMN2-201ENST00000380741 ZP3P21754 424 aa12.91□□□□□ -0.34
SMN2-201ENST00000380741 MRPS15P82914 257 aaKnown RBP12.91□□□□□ -0.34
SMN2-201ENST00000380741 MOGAT2Q3SYC2 334 aa12.91□□□□□ -0.34
SMN2-201ENST00000380741 IGSF11Q5DX21 431 aa12.91□□□□□ -0.34
SMN2-201ENST00000380741 HES5Q5TA89 166 aa12.91□□□□□ -0.34
SMN2-201ENST00000380741 ANKRD13BQ86YJ7 626 aa12.91□□□□□ -0.34
SMN2-201ENST00000380741 Q8N1Y9 231 aa12.91□□□□□ -0.34
SMN2-201ENST00000380741 NRG4Q8WWG1 115 aa12.91□□□□□ -0.34
SMN2-201ENST00000380741 C5orf30Q96GV9 206 aa12.91□□□□□ -0.34
SMN2-201ENST00000380741 HARBI1Q96MB7 349 aa12.91□□□□□ -0.34
SMN2-201ENST00000380741 LYSTQ99698 3801 aa12.91□□□□□ -0.34
SMN2-201ENST00000380741 CABLES2Q9BTV7 478 aa12.91□□□□□ -0.34
SMN2-201ENST00000380741 CCDC90BQ9GZT6 254 aa12.91□□□□□ -0.34
SMN2-201ENST00000380741 TNCP24821 2201 aa12.9□□□□□ -0.34
SMN2-201ENST00000380741 A0A0G2JLM5 398 aa12.9□□□□□ -0.34
SMN2-201ENST00000380741 FCGR3AP08637 254 aa12.9□□□□□ -0.34
SMN2-201ENST00000380741 GSTT2P0CG29 244 aa12.9□□□□□ -0.34
SMN2-201ENST00000380741 GSTT2BP0CG30 244 aa12.9□□□□□ -0.34
SMN2-201ENST00000380741 IGHV4-30-4P0DP06 118 aa12.9□□□□□ -0.34
SMN2-201ENST00000380741 MAP2K4P45985 399 aa12.9□□□□□ -0.34
SMN2-201ENST00000380741 LGALS7P47929 136 aa12.9□□□□□ -0.34
SMN2-201ENST00000380741 DEFA5Q01523 94 aa12.9□□□□□ -0.34
SMN2-201ENST00000380741 OR10J5Q8NHC4 309 aa12.9□□□□□ -0.34
SMN2-201ENST00000380741 RAB3CQ96E17 227 aa12.9□□□□□ -0.34
SMN2-201ENST00000380741 MGLLQ99685 303 aa12.9□□□□□ -0.34
SMN2-201ENST00000380741 TM2D3Q9BRN9 247 aa12.9□□□□□ -0.34
SMN2-201ENST00000380741 RAB22AQ9UL26 194 aa12.9□□□□□ -0.34
SMN2-201ENST00000380741 TRBV6-7A0A0A0MS04 114 aa12.89□□□□□ -0.35
SMN2-201ENST00000380741 PRSS48Q7RTY5 328 aa12.89□□□□□ -0.35
SMN2-201ENST00000380741 MAFIPQ8WZ33 124 aa12.89□□□□□ -0.35
SMN2-201ENST00000380741 DNAH1Q9P2D7 4330 aa12.89□□□□□ -0.35
SMN2-201ENST00000380741 A0A075B6Q4 140 aa12.88□□□□□ -0.35
SMN2-201ENST00000380741 SRRM4A7MD48 611 aaKnown RBP12.88□□□□□ -0.35
SMN2-201ENST00000380741 SHOXO15266 292 aa12.88□□□□□ -0.35
SMN2-201ENST00000380741 APELAP0DMC3 54 aa12.88□□□□□ -0.35
SMN2-201ENST00000380741 LYL1P12980 280 aa12.88□□□□□ -0.35
SMN2-201ENST00000380741 GNB3P16520 340 aa12.88□□□□□ -0.35
SMN2-201ENST00000380741 CRHBPP24387 322 aa12.88□□□□□ -0.35
SMN2-201ENST00000380741 RANBP1P43487 201 aa12.88□□□□□ -0.35
SMN2-201ENST00000380741 PSMD7P51665 324 aa12.88□□□□□ -0.35
SMN2-201ENST00000380741 OR10A3P58181 314 aa12.88□□□□□ -0.35
SMN2-201ENST00000380741 KLF5Q13887 457 aaPredicted RBP12.88□□□□□ -0.35
SMN2-201ENST00000380741 MRGPRG-AS1Q2M3A8 158 aa12.88□□□□□ -0.35
SMN2-201ENST00000380741 TMEM177Q53S58 311 aa12.88□□□□□ -0.35
SMN2-201ENST00000380741 BVESQ8NE79 360 aa12.88□□□□□ -0.35
SMN2-201ENST00000380741 OR9G4Q8NGQ1 327 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms