RNA–Protein interactions for RNA: ENST00000374426.6

CXCL12-202, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 1 (best) BASIC

Gene CXCL12, Length 470 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-202ENST00000374426 DHRSXQ8N5I4 330 aa10.49□□□□□ -0.73
CXCL12-202ENST00000374426 Q9N2K0 584 aa10.49□□□□□ -0.73
CXCL12-202ENST00000374426 ZNF221Q9UK13 617 aa10.49□□□□□ -0.73
CXCL12-202ENST00000374426 IZUMO1RA6ND01 250 aa10.48□□□□□ -0.73
CXCL12-202ENST00000374426 FOXI3A8MTJ6 420 aaPredicted RBP10.48□□□□□ -0.73
CXCL12-202ENST00000374426 M0R1X1 148 aa10.48□□□□□ -0.73
CXCL12-202ENST00000374426 BRI3O95415 125 aa10.48□□□□□ -0.73
CXCL12-202ENST00000374426 BPNT1O95861 308 aa10.48□□□□□ -0.73
CXCL12-202ENST00000374426 APOA2P02652 100 aa10.48□□□□□ -0.73
CXCL12-202ENST00000374426 IFNA6P05013 189 aa10.48□□□□□ -0.73
CXCL12-202ENST00000374426 CRYGBP07316 175 aa10.48□□□□□ -0.73
CXCL12-202ENST00000374426 CSN3P07498 182 aa10.48□□□□□ -0.73
CXCL12-202ENST00000374426 SRMP19623 302 aa10.48□□□□□ -0.73
CXCL12-202ENST00000374426 DYRK1AQ13627 763 aa10.48□□□□□ -0.73
CXCL12-202ENST00000374426 LCN12Q6JVE5 192 aa10.48□□□□□ -0.73
CXCL12-202ENST00000374426 ZNF343Q6P1L6 599 aa10.48□□□□□ -0.73
CXCL12-202ENST00000374426 GTSCR1Q86UQ5 136 aa10.48□□□□□ -0.73
CXCL12-202ENST00000374426 FAM89BQ8N5H3 189 aa10.48□□□□□ -0.73
CXCL12-202ENST00000374426 MS4A15Q8N5U1 240 aa10.48□□□□□ -0.73
CXCL12-202ENST00000374426 OR6M1Q8NGM8 313 aa10.48□□□□□ -0.73
CXCL12-202ENST00000374426 FBLIM1Q8WUP2 373 aa10.48□□□□□ -0.73
CXCL12-202ENST00000374426 TMED9Q9BVK6 235 aa10.48□□□□□ -0.73
CXCL12-202ENST00000374426 TINAGL1Q9GZM7 467 aaPredicted RBP10.48□□□□□ -0.73
CXCL12-202ENST00000374426 TUBA4BQ9H853 241 aa10.48□□□□□ -0.73
CXCL12-202ENST00000374426 RETNQ9HD89 108 aa10.48□□□□□ -0.73
CXCL12-202ENST00000374426 C12orf4Q9NQ89 552 aa10.48□□□□□ -0.73
CXCL12-202ENST00000374426 SLC35D1Q9NTN3 355 aa10.48□□□□□ -0.73
CXCL12-202ENST00000374426 PLCXD1Q9NUJ7 323 aa10.48□□□□□ -0.73
CXCL12-202ENST00000374426 FKBP14Q9NWM8 211 aa10.48□□□□□ -0.73
CXCL12-202ENST00000374426 SIGLEC8Q9NYZ4 499 aa10.48□□□□□ -0.73
CXCL12-202ENST00000374426 PEF1Q9UBV8 284 aaKnown RBP10.48□□□□□ -0.73
CXCL12-202ENST00000374426 MGAT4AQ9UM21 535 aa10.48□□□□□ -0.73
CXCL12-202ENST00000374426 RBMXL2O75526 392 aaKnown RBP10.47□□□□□ -0.73
CXCL12-202ENST00000374426 TMEM50BP56557 158 aa10.47□□□□□ -0.73
CXCL12-202ENST00000374426 HSD17B12Q53GQ0 312 aa10.47□□□□□ -0.73
CXCL12-202ENST00000374426 CEACAM19Q7Z692 300 aa10.47□□□□□ -0.73
CXCL12-202ENST00000374426 C8orf59Q8N0T1 100 aaPredicted RBP10.47□□□□□ -0.73
CXCL12-202ENST00000374426 Q8N402 240 aa10.47□□□□□ -0.73
CXCL12-202ENST00000374426 PACRGLQ8N7B6 248 aa10.47□□□□□ -0.73
CXCL12-202ENST00000374426 ZNF436-AS1Q8NC38 126 aaPredicted RBP10.47□□□□□ -0.73
CXCL12-202ENST00000374426 BPIFB6Q8NFQ5 453 aa10.47□□□□□ -0.73
CXCL12-202ENST00000374426 TMEM68Q96MH6 324 aa10.47□□□□□ -0.73
CXCL12-202ENST00000374426 RDH8Q9NYR8 311 aa10.47□□□□□ -0.73
CXCL12-202ENST00000374426 HSF4Q9ULV5 492 aa10.47□□□□□ -0.73
CXCL12-202ENST00000374426 SRRM4A7MD48 611 aaKnown RBP10.46□□□□□ -0.73
CXCL12-202ENST00000374426 UCHL1P09936 223 aa10.46□□□□□ -0.73
CXCL12-202ENST00000374426 AADACP22760 399 aa10.46□□□□□ -0.73
CXCL12-202ENST00000374426 LGALS7P47929 136 aa10.46□□□□□ -0.73
CXCL12-202ENST00000374426 MECP2P51608 486 aaKnown RBP10.46□□□□□ -0.73
CXCL12-202ENST00000374426 P2RY14Q15391 338 aa10.46□□□□□ -0.73
CXCL12-202ENST00000374426 MRGPRG-AS1Q2M3A8 158 aa10.46□□□□□ -0.73
CXCL12-202ENST00000374426 LINC00322Q6ZN03 302 aaPredicted RBP10.46□□□□□ -0.73
CXCL12-202ENST00000374426 BVESQ8NE79 360 aa10.46□□□□□ -0.73
CXCL12-202ENST00000374426 ARHGAP5-AS1Q96IT6 56 aa10.46□□□□□ -0.73
CXCL12-202ENST00000374426 USMG5Q96IX5 58 aa10.46□□□□□ -0.73
CXCL12-202ENST00000374426 HARBI1Q96MB7 349 aa10.46□□□□□ -0.73
CXCL12-202ENST00000374426 GFI1Q99684 422 aa10.46□□□□□ -0.73
CXCL12-202ENST00000374426 URM1Q9BTM9 101 aaKnown RBP10.46□□□□□ -0.73
CXCL12-202ENST00000374426 HIPK2Q9H2X6 1198 aa10.46□□□□□ -0.73
CXCL12-202ENST00000374426 C8orf4Q9NR00 106 aa10.46□□□□□ -0.73
CXCL12-202ENST00000374426 NKX1-2Q9UD57 310 aaPredicted RBP10.46□□□□□ -0.73
CXCL12-202ENST00000374426 TRDCB7Z8K6 153 aa10.45□□□□□ -0.74
CXCL12-202ENST00000374426 OR2A4O95047 310 aa10.45□□□□□ -0.74
CXCL12-202ENST00000374426 CD3GP09693 182 aa10.45□□□□□ -0.74
CXCL12-202ENST00000374426 APELAP0DMC3 54 aa10.45□□□□□ -0.74
CXCL12-202ENST00000374426 TATDN3Q17R31 274 aa10.45□□□□□ -0.74
CXCL12-202ENST00000374426 RPEL1Q2QD12 228 aa10.45□□□□□ -0.74
CXCL12-202ENST00000374426 ADAD2Q8NCV1 583 aaKnown RBP10.45□□□□□ -0.74
CXCL12-202ENST00000374426 C5orf30Q96GV9 206 aa10.45□□□□□ -0.74
CXCL12-202ENST00000374426 CMSS1Q9BQ75 279 aaKnown RBP10.45□□□□□ -0.74
CXCL12-202ENST00000374426 FAM110AQ9BQ89 295 aa10.45□□□□□ -0.74
CXCL12-202ENST00000374426 MND1Q9BWT6 205 aa10.45□□□□□ -0.74
CXCL12-202ENST00000374426 PECRQ9BY49 303 aa10.45□□□□□ -0.74
CXCL12-202ENST00000374426 OR2D2Q9H210 308 aa10.45□□□□□ -0.74
CXCL12-202ENST00000374426 SDHAF2Q9NX18 166 aa10.45□□□□□ -0.74
CXCL12-202ENST00000374426 COA4Q9NYJ1 87 aa10.45□□□□□ -0.74
CXCL12-202ENST00000374426 LSM2Q9Y333 95 aaKnown RBP10.45□□□□□ -0.74
CXCL12-202ENST00000374426 CEPT1Q9Y6K0 416 aa10.45□□□□□ -0.74
CXCL12-202ENST00000374426 SHISA3A0PJX4 238 aa10.44□□□□□ -0.74
CXCL12-202ENST00000374426 MSGN1A6NI15 193 aa10.44□□□□□ -0.74
CXCL12-202ENST00000374426 SLC17A2O00624 439 aa10.44□□□□□ -0.74
CXCL12-202ENST00000374426 JTBO76095 146 aa10.44□□□□□ -0.74
CXCL12-202ENST00000374426 CDK1P06493 297 aa10.44□□□□□ -0.74
CXCL12-202ENST00000374426 TMEM177Q53S58 311 aa10.44□□□□□ -0.74
CXCL12-202ENST00000374426 PLAC9Q5JTB6 97 aa10.44□□□□□ -0.74
CXCL12-202ENST00000374426 RNLSQ5VYX0 342 aa10.44□□□□□ -0.74
CXCL12-202ENST00000374426 PLEKHA3Q9HB20 300 aa10.44□□□□□ -0.74
CXCL12-202ENST00000374426 PLGRKTQ9HBL7 147 aa10.44□□□□□ -0.74
CXCL12-202ENST00000374426 BMPR1BO00238 502 aa10.43□□□□□ -0.74
CXCL12-202ENST00000374426 BET1O15155 118 aa10.43□□□□□ -0.74
CXCL12-202ENST00000374426 SHOXO15266 292 aa10.43□□□□□ -0.74
CXCL12-202ENST00000374426 FABP7O15540 132 aa10.43□□□□□ -0.74
CXCL12-202ENST00000374426 SERPINB10P48595 397 aa10.43□□□□□ -0.74
CXCL12-202ENST00000374426 CD81P60033 236 aa10.43□□□□□ -0.74
CXCL12-202ENST00000374426 SPHARQ15513 63 aa10.43□□□□□ -0.74
CXCL12-202ENST00000374426 CD300EQ496F6 205 aaPredicted RBP10.43□□□□□ -0.74
CXCL12-202ENST00000374426 IGSF11Q5DX21 431 aa10.43□□□□□ -0.74
CXCL12-202ENST00000374426 OR4A4PQ8NGN8 299 aa10.43□□□□□ -0.74
CXCL12-202ENST00000374426 OR2K2Q8NGT1 345 aa10.43□□□□□ -0.74
CXCL12-202ENST00000374426 SNAPC3Q92966 411 aa10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 113.5 ms