RNA–Protein interactions for RNA: ENST00000340477.9

SYNE4-202, Transcript of spectrin repeat containing nuclear envelope family member 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNE4, Length 1,004 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4-202ENST00000340477 HLA-DQB1P01920 261 aa15.16■□□□□ 0.02
SYNE4-202ENST00000340477 ELK1P19419 428 aa15.16■□□□□ 0.02
SYNE4-202ENST00000340477 CNTFRP26992 372 aa15.16■□□□□ 0.02
SYNE4-202ENST00000340477 LIN54Q6MZP7 749 aa15.16■□□□□ 0.02
SYNE4-202ENST00000340477 OR5AP2Q8NGF4 316 aa15.16■□□□□ 0.02
SYNE4-202ENST00000340477 SCPEP1Q9HB40 452 aa15.16■□□□□ 0.02
SYNE4-202ENST00000340477 LINC00527Q9UJ94 153 aa15.16■□□□□ 0.02
SYNE4-202ENST00000340477 ADAM30Q9UKF2 790 aa15.16■□□□□ 0.02
SYNE4-202ENST00000340477 MGAM2Q2M2H8 2515 aa15.16■□□□□ 0.02
SYNE4-202ENST00000340477 NBEAL1Q6ZS30 2694 aa15.16■□□□□ 0.02
SYNE4-202ENST00000340477 A0A1W2PRX2 142 aa15.15■□□□□ 0.02
SYNE4-202ENST00000340477 FCER2P06734 321 aa15.15■□□□□ 0.02
SYNE4-202ENST00000340477 FCGR2CP31995 323 aa15.15■□□□□ 0.02
SYNE4-202ENST00000340477 TAS2R46P59540 309 aa15.15■□□□□ 0.02
SYNE4-202ENST00000340477 CD83Q01151 205 aa15.15■□□□□ 0.02
SYNE4-202ENST00000340477 CDK10Q15131 360 aa15.15■□□□□ 0.02
SYNE4-202ENST00000340477 ZNF329Q86UD4 541 aa15.15■□□□□ 0.02
SYNE4-202ENST00000340477 R3HDM4Q96D70 268 aa15.15■□□□□ 0.02
SYNE4-202ENST00000340477 RBMXL1Q96E39 390 aaKnown RBP15.15■□□□□ 0.02
SYNE4-202ENST00000340477 RITA1Q96K30 269 aa15.15■□□□□ 0.02
SYNE4-202ENST00000340477 HSPB9Q9BQS6 159 aa15.15■□□□□ 0.02
SYNE4-202ENST00000340477 PARP11Q9NR21 331 aa15.15■□□□□ 0.02
SYNE4-202ENST00000340477 METTL1Q9UBP6 276 aaKnown RBP15.15■□□□□ 0.02
SYNE4-202ENST00000340477 PRELID3BQ9Y3B1 194 aa15.15■□□□□ 0.02
SYNE4-202ENST00000340477 TRRAPQ9Y4A5 3859 aa15.15■□□□□ 0.02
SYNE4-202ENST00000340477 RGS5O15539 181 aa15.14■□□□□ 0.01
SYNE4-202ENST00000340477 PROP1O75360 226 aa15.14■□□□□ 0.01
SYNE4-202ENST00000340477 TUSC2O75896 110 aa15.14■□□□□ 0.01
SYNE4-202ENST00000340477 PF4V1P10720 104 aa15.14■□□□□ 0.01
SYNE4-202ENST00000340477 HERV-K104P61576 105 aa15.14■□□□□ 0.01
SYNE4-202ENST00000340477 HIST2H2BDQ6DRA6 164 aa15.14■□□□□ 0.01
SYNE4-202ENST00000340477 TEX38Q6PEX7 206 aa15.14■□□□□ 0.01
SYNE4-202ENST00000340477 SNX29P2Q8IUI4 249 aa15.14■□□□□ 0.01
SYNE4-202ENST00000340477 OR5H2Q8NGV7 314 aa15.14■□□□□ 0.01
SYNE4-202ENST00000340477 ABHD5Q8WTS1 349 aa15.14■□□□□ 0.01
SYNE4-202ENST00000340477 C15orf40Q8WUR7 153 aa15.14■□□□□ 0.01
SYNE4-202ENST00000340477 FBXL15Q9H469 300 aa15.14■□□□□ 0.01
SYNE4-202ENST00000340477 EHFQ9NZC4 300 aa15.14■□□□□ 0.01
SYNE4-202ENST00000340477 ZNF580Q9UK33 172 aa15.14■□□□□ 0.01
SYNE4-202ENST00000340477 SHOXO15266 292 aa15.13■□□□□ 0.01
SYNE4-202ENST00000340477 IGKV1-16P04430 117 aa15.13■□□□□ 0.01
SYNE4-202ENST00000340477 DUTP33316 252 aaKnown RBP15.13■□□□□ 0.01
SYNE4-202ENST00000340477 LGALS7P47929 136 aa15.13■□□□□ 0.01
SYNE4-202ENST00000340477 SPCS2Q15005 226 aa15.13■□□□□ 0.01
SYNE4-202ENST00000340477 KCTD9Q7L273 389 aa15.13■□□□□ 0.01
SYNE4-202ENST00000340477 BVESQ8NE79 360 aa15.13■□□□□ 0.01
SYNE4-202ENST00000340477 SECTM1Q8WVN6 248 aa15.13■□□□□ 0.01
SYNE4-202ENST00000340477 SNAPC3Q92966 411 aa15.13■□□□□ 0.01
SYNE4-202ENST00000340477 BORCS5Q969J3 196 aa15.13■□□□□ 0.01
SYNE4-202ENST00000340477 HARBI1Q96MB7 349 aa15.13■□□□□ 0.01
SYNE4-202ENST00000340477 OR51J1Q9H342 316 aa15.13■□□□□ 0.01
SYNE4-202ENST00000340477 CCDC59Q9P031 241 aaKnown RBP15.13■□□□□ 0.01
SYNE4-202ENST00000340477 EXTL2Q9UBQ6 330 aa15.13■□□□□ 0.01
SYNE4-202ENST00000340477 RBMX2Q9Y388 322 aaKnown RBP15.13■□□□□ 0.01
SYNE4-202ENST00000340477 WNK1Q9H4A3 2382 aa15.13■□□□□ 0.01
SYNE4-202ENST00000340477 PKD1L1Q8TDX9 2849 aa15.12■□□□□ 0.01
SYNE4-202ENST00000340477 CCDC160A6NGH7 325 aa15.12■□□□□ 0.01
SYNE4-202ENST00000340477 LINC01548A6NM66 108 aa15.12■□□□□ 0.01
SYNE4-202ENST00000340477 SULT1C2O00338 296 aa15.12■□□□□ 0.01
SYNE4-202ENST00000340477 PPYP01298 95 aa15.12■□□□□ 0.01
SYNE4-202ENST00000340477 IGF1P05019 195 aa15.12■□□□□ 0.01
SYNE4-202ENST00000340477 AADACP22760 399 aa15.12■□□□□ 0.01
SYNE4-202ENST00000340477 LINC00205P59089 165 aa15.12■□□□□ 0.01
SYNE4-202ENST00000340477 PSG5Q15238 335 aa15.12■□□□□ 0.01
SYNE4-202ENST00000340477 CXorf66Q5JRM2 361 aaPredicted RBP15.12■□□□□ 0.01
SYNE4-202ENST00000340477 C10orf99Q6UWK7 81 aa15.12■□□□□ 0.01
SYNE4-202ENST00000340477 C5orf30Q96GV9 206 aa15.12■□□□□ 0.01
SYNE4-202ENST00000340477 HSD17B10Q99714 261 aaKnown RBP15.12■□□□□ 0.01
SYNE4-202ENST00000340477 ANAPC10Q9UM13 185 aa15.12■□□□□ 0.01
SYNE4-202ENST00000340477 IGHV7-81A0A0B4J1V7 117 aa15.11■□□□□ 0.01
SYNE4-202ENST00000340477 IGKV1D-13A0A0B4J2D9 117 aa15.11■□□□□ 0.01
SYNE4-202ENST00000340477 SLC25A17O43808 307 aa15.11■□□□□ 0.01
SYNE4-202ENST00000340477 IGKV1-13P0DP09 117 aa15.11■□□□□ 0.01
SYNE4-202ENST00000340477 RCVRNP35243 200 aa15.11■□□□□ 0.01
SYNE4-202ENST00000340477 FXYD4P59646 89 aa15.11■□□□□ 0.01
SYNE4-202ENST00000340477 MSMO1Q15800 293 aa15.11■□□□□ 0.01
SYNE4-202ENST00000340477 VMA21Q3ZAQ7 101 aa15.11■□□□□ 0.01
SYNE4-202ENST00000340477 ZNF660Q6AZW8 331 aaPredicted RBP15.11■□□□□ 0.01
SYNE4-202ENST00000340477 GPX8Q8TED1 209 aa15.11■□□□□ 0.01
SYNE4-202ENST00000340477 ISOC1Q96CN7 298 aa15.11■□□□□ 0.01
SYNE4-202ENST00000340477 DCUN1D5Q9BTE7 237 aa15.11■□□□□ 0.01
SYNE4-202ENST00000340477 ZFP57Q9NU63 452 aa15.11■□□□□ 0.01
SYNE4-202ENST00000340477 NUDT19A8MXV4 375 aa15.1■□□□□ 0.01
SYNE4-202ENST00000340477 H3BMQ9 156 aa15.1■□□□□ 0.01
SYNE4-202ENST00000340477 ATP6V0E1O15342 81 aa15.1■□□□□ 0.01
SYNE4-202ENST00000340477 TPPPO94811 219 aa15.1■□□□□ 0.01
SYNE4-202ENST00000340477 CRYZL1O95825 349 aa15.1■□□□□ 0.01
SYNE4-202ENST00000340477 PF4P02776 101 aa15.1■□□□□ 0.01
SYNE4-202ENST00000340477 FOXE3Q13461 319 aa15.1■□□□□ 0.01
SYNE4-202ENST00000340477 TMEM177Q53S58 311 aa15.1■□□□□ 0.01
SYNE4-202ENST00000340477 TCTEX1D4Q5JR98 221 aa15.1■□□□□ 0.01
SYNE4-202ENST00000340477 ZBTB34Q8NCN2 500 aa15.1■□□□□ 0.01
SYNE4-202ENST00000340477 OSR1Q8TAX0 266 aaPredicted RBP15.1■□□□□ 0.01
SYNE4-202ENST00000340477 TCTEX1D2Q8WW35 142 aa15.1■□□□□ 0.01
SYNE4-202ENST00000340477 GIMAP1Q8WWP7 306 aa15.1■□□□□ 0.01
SYNE4-202ENST00000340477 CLCC1Q96S66 551 aa15.1■□□□□ 0.01
SYNE4-202ENST00000340477 SLC5A7Q9GZV3 580 aa15.1■□□□□ 0.01
SYNE4-202ENST00000340477 TRAV41A0A0B4J266 112 aa15.09■□□□□ 0.01
SYNE4-202ENST00000340477 LINC00473A8K010 186 aa15.09■□□□□ 0.01
SYNE4-202ENST00000340477 CREBL2O60519 120 aaPredicted RBP15.09■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms