RNA–Protein interactions for RNA: ENST00000340398.4

H3F3C-201, Transcript of H3 histone family member 3C, humanhuman

APPRIS P1 BASIC

Gene H3F3C, Length 1,057 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3C-201ENST00000340398 ZNF221Q9UK13 617 aa12.48□□□□□ -0.41
H3F3C-201ENST00000340398 AK6Q9Y3D8 172 aaKnown RBP12.48□□□□□ -0.41
H3F3C-201ENST00000340398 FOXI3A8MTJ6 420 aaPredicted RBP12.47□□□□□ -0.41
H3F3C-201ENST00000340398 M0R1X1 148 aa12.47□□□□□ -0.41
H3F3C-201ENST00000340398 IGLV2-23P01705 113 aa12.47□□□□□ -0.41
H3F3C-201ENST00000340398 TRBV12-3P01733 135 aa12.47□□□□□ -0.41
H3F3C-201ENST00000340398 VEGFCP49767 419 aa12.47□□□□□ -0.41
H3F3C-201ENST00000340398 SYNJ2BPP57105 145 aa12.47□□□□□ -0.41
H3F3C-201ENST00000340398 SPHARQ15513 63 aa12.47□□□□□ -0.41
H3F3C-201ENST00000340398 OR6M1Q8NGM8 313 aa12.47□□□□□ -0.41
H3F3C-201ENST00000340398 URM1Q9BTM9 101 aaKnown RBP12.47□□□□□ -0.41
H3F3C-201ENST00000340398 PECRQ9BY49 303 aa12.47□□□□□ -0.41
H3F3C-201ENST00000340398 C8orf4Q9NR00 106 aa12.47□□□□□ -0.41
H3F3C-201ENST00000340398 SLC35D1Q9NTN3 355 aa12.47□□□□□ -0.41
H3F3C-201ENST00000340398 RDH8Q9NYR8 311 aa12.47□□□□□ -0.41
H3F3C-201ENST00000340398 LSM2Q9Y333 95 aaKnown RBP12.47□□□□□ -0.41
H3F3C-201ENST00000340398 EPPK1P58107 5090 aaKnown RBP12.46□□□□□ -0.41
H3F3C-201ENST00000340398 SRRM4A7MD48 611 aaKnown RBP12.46□□□□□ -0.41
H3F3C-201ENST00000340398 A8MZ25 164 aa12.46□□□□□ -0.41
H3F3C-201ENST00000340398 EBAG9O00559 213 aa12.46□□□□□ -0.41
H3F3C-201ENST00000340398 RBMXL2O75526 392 aaKnown RBP12.46□□□□□ -0.41
H3F3C-201ENST00000340398 SPDEFO95238 335 aa12.46□□□□□ -0.41
H3F3C-201ENST00000340398 CRYGBP07316 175 aa12.46□□□□□ -0.41
H3F3C-201ENST00000340398 UCHL1P09936 223 aa12.46□□□□□ -0.41
H3F3C-201ENST00000340398 APELAP0DMC3 54 aa12.46□□□□□ -0.41
H3F3C-201ENST00000340398 ZP3P21754 424 aa12.46□□□□□ -0.41
H3F3C-201ENST00000340398 CLDN12P56749 244 aa12.46□□□□□ -0.41
H3F3C-201ENST00000340398 PLA2G7Q13093 441 aa12.46□□□□□ -0.41
H3F3C-201ENST00000340398 RCN1Q15293 331 aa12.46□□□□□ -0.41
H3F3C-201ENST00000340398 HAGHQ16775 308 aa12.46□□□□□ -0.41
H3F3C-201ENST00000340398 PLAC9Q5JTB6 97 aa12.46□□□□□ -0.41
H3F3C-201ENST00000340398 TMEM91Q6ZNR0 172 aa12.46□□□□□ -0.41
H3F3C-201ENST00000340398 PDPNQ86YL7 162 aa12.46□□□□□ -0.41
H3F3C-201ENST00000340398 SGPP2Q8IWX5 399 aa12.46□□□□□ -0.41
H3F3C-201ENST00000340398 OR9G4Q8NGQ1 327 aa12.46□□□□□ -0.41
H3F3C-201ENST00000340398 CMSS1Q9BQ75 279 aaKnown RBP12.46□□□□□ -0.41
H3F3C-201ENST00000340398 MND1Q9BWT6 205 aa12.46□□□□□ -0.41
H3F3C-201ENST00000340398 PLGRKTQ9HBL7 147 aa12.46□□□□□ -0.41
H3F3C-201ENST00000340398 IZUMO1RA6ND01 250 aa12.45□□□□□ -0.42
H3F3C-201ENST00000340398 TRDCB7Z8K6 153 aa12.45□□□□□ -0.42
H3F3C-201ENST00000340398 APOA2P02652 100 aa12.45□□□□□ -0.42
H3F3C-201ENST00000340398 MED22Q15528 200 aa12.45□□□□□ -0.42
H3F3C-201ENST00000340398 LIPKQ5VXJ0 399 aa12.45□□□□□ -0.42
H3F3C-201ENST00000340398 ISOC1Q96CN7 298 aa12.45□□□□□ -0.42
H3F3C-201ENST00000340398 HSF4Q9ULV5 492 aa12.45□□□□□ -0.42
H3F3C-201ENST00000340398 A0A0G2JLM5 398 aa12.44□□□□□ -0.42
H3F3C-201ENST00000340398 SLC17A2O00624 439 aa12.44□□□□□ -0.42
H3F3C-201ENST00000340398 CSN3P07498 182 aa12.44□□□□□ -0.42
H3F3C-201ENST00000340398 MRGPRG-AS1Q2M3A8 158 aa12.44□□□□□ -0.42
H3F3C-201ENST00000340398 C2orf76Q3KRA6 126 aa12.44□□□□□ -0.42
H3F3C-201ENST00000340398 IGSF11Q5DX21 431 aa12.44□□□□□ -0.42
H3F3C-201ENST00000340398 RNLSQ5VYX0 342 aa12.44□□□□□ -0.42
H3F3C-201ENST00000340398 C5orf30Q96GV9 206 aa12.44□□□□□ -0.42
H3F3C-201ENST00000340398 C12orf4Q9NQ89 552 aa12.44□□□□□ -0.42
H3F3C-201ENST00000340398 SDHAF2Q9NX18 166 aa12.44□□□□□ -0.42
H3F3C-201ENST00000340398 PEF1Q9UBV8 284 aaKnown RBP12.44□□□□□ -0.42
H3F3C-201ENST00000340398 MGAT4AQ9UM21 535 aa12.44□□□□□ -0.42
H3F3C-201ENST00000340398 MSGN1A6NI15 193 aa12.43□□□□□ -0.42
H3F3C-201ENST00000340398 H3BUA1 57 aa12.43□□□□□ -0.42
H3F3C-201ENST00000340398 BET1O15155 118 aa12.43□□□□□ -0.42
H3F3C-201ENST00000340398 GSTT2P0CG29 244 aa12.43□□□□□ -0.42
H3F3C-201ENST00000340398 GSTT2BP0CG30 244 aa12.43□□□□□ -0.42
H3F3C-201ENST00000340398 RPS25P62851 125 aaKnown RBP12.43□□□□□ -0.42
H3F3C-201ENST00000340398 DYRK1AQ13627 763 aa12.43□□□□□ -0.42
H3F3C-201ENST00000340398 RAB11BQ15907 218 aa12.43□□□□□ -0.42
H3F3C-201ENST00000340398 OGFRL1Q5TC84 451 aaPredicted RBP12.43□□□□□ -0.42
H3F3C-201ENST00000340398 ZNF343Q6P1L6 599 aa12.43□□□□□ -0.42
H3F3C-201ENST00000340398 BVESQ8NE79 360 aa12.43□□□□□ -0.42
H3F3C-201ENST00000340398 SPATA25Q9BR10 227 aa12.43□□□□□ -0.42
H3F3C-201ENST00000340398 THAP7Q9BT49 309 aaPredicted RBP12.43□□□□□ -0.42
H3F3C-201ENST00000340398 TINAGL1Q9GZM7 467 aaPredicted RBP12.43□□□□□ -0.42
H3F3C-201ENST00000340398 TUBA4BQ9H853 241 aa12.43□□□□□ -0.42
H3F3C-201ENST00000340398 KCNK7Q9Y2U2 307 aa12.43□□□□□ -0.42
H3F3C-201ENST00000340398 H0Y980 276 aa12.42□□□□□ -0.42
H3F3C-201ENST00000340398 HSMCR30P0CW71 290 aa12.42□□□□□ -0.42
H3F3C-201ENST00000340398 LGALS7P47929 136 aa12.42□□□□□ -0.42
H3F3C-201ENST00000340398 IRF3Q14653 427 aa12.42□□□□□ -0.42
H3F3C-201ENST00000340398 UFD1Q92890 307 aa12.42□□□□□ -0.42
H3F3C-201ENST00000340398 FAM3DQ96BQ1 224 aa12.42□□□□□ -0.42
H3F3C-201ENST00000340398 OR2D2Q9H210 308 aa12.42□□□□□ -0.42
H3F3C-201ENST00000340398 RETNQ9HD89 108 aa12.42□□□□□ -0.42
H3F3C-201ENST00000340398 COA4Q9NYJ1 87 aa12.42□□□□□ -0.42
H3F3C-201ENST00000340398 SHOXO15266 292 aa12.41□□□□□ -0.42
H3F3C-201ENST00000340398 FABP7O15540 132 aa12.41□□□□□ -0.42
H3F3C-201ENST00000340398 PRH1P02810 166 aa12.41□□□□□ -0.42
H3F3C-201ENST00000340398 MOGAT2Q3SYC2 334 aa12.41□□□□□ -0.42
H3F3C-201ENST00000340398 ZNF436-AS1Q8NC38 126 aaPredicted RBP12.41□□□□□ -0.42
H3F3C-201ENST00000340398 OR4A4PQ8NGN8 299 aa12.41□□□□□ -0.42
H3F3C-201ENST00000340398 MAFIPQ8WZ33 124 aa12.41□□□□□ -0.42
H3F3C-201ENST00000340398 HARBI1Q96MB7 349 aa12.41□□□□□ -0.42
H3F3C-201ENST00000340398 ZNF230Q9UIE0 474 aaPredicted RBP12.41□□□□□ -0.42
H3F3C-201ENST00000340398 BOLA1Q9Y3E2 137 aa12.41□□□□□ -0.42
H3F3C-201ENST00000340398 TMEM272A0A1B0GTI8 110 aa12.4□□□□□ -0.42
H3F3C-201ENST00000340398 DENRO43583 198 aaKnown RBP12.4□□□□□ -0.42
H3F3C-201ENST00000340398 AADACP22760 399 aa12.4□□□□□ -0.42
H3F3C-201ENST00000340398 MECP2P51608 486 aaKnown RBP12.4□□□□□ -0.42
H3F3C-201ENST00000340398 TPBGQ13641 420 aa12.4□□□□□ -0.42
H3F3C-201ENST00000340398 TATDN3Q17R31 274 aa12.4□□□□□ -0.42
H3F3C-201ENST00000340398 RPEL1Q2QD12 228 aa12.4□□□□□ -0.42
H3F3C-201ENST00000340398 TMEM177Q53S58 311 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms