RNA–Protein interactions for RNA: ENST00000337659.10

PRPF4B-201, Transcript of pre-mRNA processing factor 4B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF4B, Length 4,415 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4B-201ENST00000337659 GLIPR1P48060 266 aa4.38□□□□□ -1.71
PRPF4B-201ENST00000337659 LRRC75BQ2VPJ9 315 aa4.38□□□□□ -1.71
PRPF4B-201ENST00000337659 TMEM170AQ8WVE7 144 aa4.38□□□□□ -1.71
PRPF4B-201ENST00000337659 PARP12Q9H0J9 701 aaKnown RBP4.38□□□□□ -1.71
PRPF4B-201ENST00000337659 CHODLQ9H9P2 273 aa4.38□□□□□ -1.71
PRPF4B-201ENST00000337659 SONP18583 2426 aaKnown RBP4.38□□□□□ -1.71
PRPF4B-201ENST00000337659 CACNA1DQ01668 2161 aa4.38□□□□□ -1.71
PRPF4B-201ENST00000337659 CELSR3Q9NYQ7 3312 aa4.38□□□□□ -1.71
PRPF4B-201ENST00000337659 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP4.37□□□□□ -1.71
PRPF4B-201ENST00000337659 PSMB11A5LHX3 300 aa4.37□□□□□ -1.71
PRPF4B-201ENST00000337659 NKX2-6A6NCS4 301 aa4.37□□□□□ -1.71
PRPF4B-201ENST00000337659 SIX6O95475 246 aa4.37□□□□□ -1.71
PRPF4B-201ENST00000337659 FSHBP01225 129 aa4.37□□□□□ -1.71
PRPF4B-201ENST00000337659 RLN1P04808 185 aa4.37□□□□□ -1.71
PRPF4B-201ENST00000337659 SULT1A1P50225 295 aa4.37□□□□□ -1.71
PRPF4B-201ENST00000337659 EWSR1Q01844 656 aaKnown RBP eCLIP4.37□□□□□ -1.71
PRPF4B-201ENST00000337659 NKAPLQ5M9Q1 402 aa4.37□□□□□ -1.71
PRPF4B-201ENST00000337659 MYO7BQ6PIF6 2116 aa4.37□□□□□ -1.71
PRPF4B-201ENST00000337659 PDPNQ86YL7 162 aa4.37□□□□□ -1.71
PRPF4B-201ENST00000337659 ZNF525Q8N782 197 aa4.37□□□□□ -1.71
PRPF4B-201ENST00000337659 OR2Z1Q8NG97 314 aa4.37□□□□□ -1.71
PRPF4B-201ENST00000337659 OSR1Q8TAX0 266 aaPredicted RBP4.37□□□□□ -1.71
PRPF4B-201ENST00000337659 THAP6Q8TBB0 222 aa4.37□□□□□ -1.71
PRPF4B-201ENST00000337659 CFHR4Q92496 578 aa4.37□□□□□ -1.71
PRPF4B-201ENST00000337659 MBD6Q96DN6 1003 aa4.37□□□□□ -1.71
PRPF4B-201ENST00000337659 LRRC46Q96FV0 321 aa4.37□□□□□ -1.71
PRPF4B-201ENST00000337659 ZNF414Q96IQ9 312 aa4.37□□□□□ -1.71
PRPF4B-201ENST00000337659 EGLN1Q9GZT9 426 aa4.37□□□□□ -1.71
PRPF4B-201ENST00000337659 GAL3ST2Q9H3Q3 398 aa4.37□□□□□ -1.71
PRPF4B-201ENST00000337659 PRDM13Q9H4Q3 707 aa4.37□□□□□ -1.71
PRPF4B-201ENST00000337659 SESN1Q9Y6P5 492 aa4.37□□□□□ -1.71
PRPF4B-201ENST00000337659 HIVEP3Q5T1R4 2406 aa4.37□□□□□ -1.71
PRPF4B-201ENST00000337659 CHD8Q9HCK8 2581 aa4.37□□□□□ -1.71
PRPF4B-201ENST00000337659 ZNF462Q96JM2 2506 aa4.37□□□□□ -1.71
PRPF4B-201ENST00000337659 CGB1A6NKQ9 187 aa4.37□□□□□ -1.71
PRPF4B-201ENST00000337659 KRBOX1C9JBD0 128 aa4.37□□□□□ -1.71
PRPF4B-201ENST00000337659 IFNA21P01568 189 aa4.37□□□□□ -1.71
PRPF4B-201ENST00000337659 CD3EP07766 207 aa4.37□□□□□ -1.71
PRPF4B-201ENST00000337659 TNFRSF9Q07011 255 aa4.37□□□□□ -1.71
PRPF4B-201ENST00000337659 SNTB1Q13884 538 aaKnown RBP4.37□□□□□ -1.71
PRPF4B-201ENST00000337659 ZNF273Q14593 569 aa4.37□□□□□ -1.71
PRPF4B-201ENST00000337659 GNMTQ14749 295 aa4.37□□□□□ -1.71
PRPF4B-201ENST00000337659 ZNF826PQ6ZT77 177 aa4.37□□□□□ -1.71
PRPF4B-201ENST00000337659 MOGAT3Q86VF5 341 aa4.37□□□□□ -1.71
PRPF4B-201ENST00000337659 TMEM167AQ8TBQ9 72 aa4.37□□□□□ -1.71
PRPF4B-201ENST00000337659 MAFIPQ8WZ33 124 aa4.37□□□□□ -1.71
PRPF4B-201ENST00000337659 TMEM186Q96B77 213 aa4.37□□□□□ -1.71
PRPF4B-201ENST00000337659 AIFM2Q9BRQ8 373 aa4.37□□□□□ -1.71
PRPF4B-201ENST00000337659 BOLA1Q9Y3E2 137 aa4.37□□□□□ -1.71
PRPF4B-201ENST00000337659 KALRNO60229 2985 aa4.37□□□□□ -1.71
PRPF4B-201ENST00000337659 SPINT2O43291 252 aa4.37□□□□□ -1.71
PRPF4B-201ENST00000337659 PGAM2P15259 253 aa4.37□□□□□ -1.71
PRPF4B-201ENST00000337659 AKR1C4P17516 323 aa4.37□□□□□ -1.71
PRPF4B-201ENST00000337659 RPL12P30050 165 aaKnown RBP4.37□□□□□ -1.71
PRPF4B-201ENST00000337659 CARTPTQ16568 116 aa4.37□□□□□ -1.71
PRPF4B-201ENST00000337659 TMEM200BQ69YZ2 307 aa4.37□□□□□ -1.71
PRPF4B-201ENST00000337659 SPSB3Q6PJ21 355 aa4.37□□□□□ -1.71
PRPF4B-201ENST00000337659 TMEM252Q8N6L7 170 aa4.37□□□□□ -1.71
PRPF4B-201ENST00000337659 OR1L8Q8NGR8 309 aa4.37□□□□□ -1.71
PRPF4B-201ENST00000337659 RDH5Q92781 318 aa4.37□□□□□ -1.71
PRPF4B-201ENST00000337659 ATP5SQ99766 215 aa4.37□□□□□ -1.71
PRPF4B-201ENST00000337659 hADV38S2A0JD32 116 aa4.37□□□□□ -1.71
PRPF4B-201ENST00000337659 NKX6-3A6NJ46 265 aa4.37□□□□□ -1.71
PRPF4B-201ENST00000337659 NDUFS8O00217 210 aa4.37□□□□□ -1.71
PRPF4B-201ENST00000337659 MED6O75586 246 aa4.37□□□□□ -1.71
PRPF4B-201ENST00000337659 F12P00748 615 aaPredicted RBP4.37□□□□□ -1.71
PRPF4B-201ENST00000337659 CT45A6P0DMU7 189 aa4.37□□□□□ -1.71
PRPF4B-201ENST00000337659 CT45A5P0DMU8 189 aa4.37□□□□□ -1.71
PRPF4B-201ENST00000337659 CT45A7P0DMV0 189 aa4.37□□□□□ -1.71
PRPF4B-201ENST00000337659 HTR2BP41595 481 aa4.37□□□□□ -1.71
PRPF4B-201ENST00000337659 CASP6P55212 293 aa4.37□□□□□ -1.71
PRPF4B-201ENST00000337659 DLK1P80370 383 aa4.37□□□□□ -1.71
PRPF4B-201ENST00000337659 MRPS15P82914 257 aaKnown RBP4.37□□□□□ -1.71
PRPF4B-201ENST00000337659 SERF2P84101 59 aa4.37□□□□□ -1.71
PRPF4B-201ENST00000337659 IAH1Q2TAA2 248 aaPredicted RBP4.37□□□□□ -1.71
PRPF4B-201ENST00000337659 TOR2AQ5JU69 321 aa4.37□□□□□ -1.71
PRPF4B-201ENST00000337659 OR2C3Q8N628 320 aa4.37□□□□□ -1.71
PRPF4B-201ENST00000337659 NEUROG1Q92886 237 aa4.37□□□□□ -1.71
PRPF4B-201ENST00000337659 SLC25A31Q9H0C2 315 aa4.37□□□□□ -1.71
PRPF4B-201ENST00000337659 SIRPDQ9H106 197 aa4.37□□□□□ -1.71
PRPF4B-201ENST00000337659 MSL2Q9HCI7 577 aa4.37□□□□□ -1.71
PRPF4B-201ENST00000337659 ERRFI1Q9UJM3 462 aaPredicted RBP4.37□□□□□ -1.71
PRPF4B-201ENST00000337659 GTF3C1Q12789 2109 aa4.36□□□□□ -1.71
PRPF4B-201ENST00000337659 IGHV1-69-2A0A0G2JMI3 117 aa4.36□□□□□ -1.71
PRPF4B-201ENST00000337659 H0YJW9 148 aa4.36□□□□□ -1.71
PRPF4B-201ENST00000337659 H7C2Y5 167 aa4.36□□□□□ -1.71
PRPF4B-201ENST00000337659 ZNHIT1O43257 154 aa4.36□□□□□ -1.71
PRPF4B-201ENST00000337659 MPDU1O75352 247 aa4.36□□□□□ -1.71
PRPF4B-201ENST00000337659 CLN5O75503 358 aa4.36□□□□□ -1.71
PRPF4B-201ENST00000337659 CEACAM6P40199 344 aa4.36□□□□□ -1.71
PRPF4B-201ENST00000337659 SSBP2P81877 361 aaPredicted RBP4.36□□□□□ -1.71
PRPF4B-201ENST00000337659 C2orf83Q53S99 150 aa4.36□□□□□ -1.71
PRPF4B-201ENST00000337659 LRRC75A-AS1Q8N1F1 130 aa4.36□□□□□ -1.71
PRPF4B-201ENST00000337659 SREK1IP1Q8N9Q2 155 aaPredicted RBP4.36□□□□□ -1.71
PRPF4B-201ENST00000337659 ZNF383Q8NA42 475 aa4.36□□□□□ -1.71
PRPF4B-201ENST00000337659 THAP8Q8NA92 274 aa4.36□□□□□ -1.71
PRPF4B-201ENST00000337659 RNF141Q8WVD5 230 aa4.36□□□□□ -1.71
PRPF4B-201ENST00000337659 PLPPR2Q96GM1 343 aa4.36□□□□□ -1.71
PRPF4B-201ENST00000337659 CIB3Q96Q77 187 aaPredicted RBP4.36□□□□□ -1.71
PRPF4B-201ENST00000337659 ABHD14AQ9BUJ0 271 aa4.36□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms