RNA–Protein interactions for RNA: ENST00000334504.11

COL4A6-201, Transcript of collagen type IV alpha 6 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL4A6, Length 6,700 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-201ENST00000334504 RAC3P60763 192 aa8.47□□□□□ -1.05
COL4A6-201ENST00000334504 C3AR1Q16581 482 aa8.47□□□□□ -1.05
COL4A6-201ENST00000334504 GPR82Q96P67 336 aa8.47□□□□□ -1.05
COL4A6-201ENST00000334504 PHLDA3Q9Y5J5 127 aa8.47□□□□□ -1.05
COL4A6-201ENST00000334504 TRBV5-5A0A0J9YX44 114 aa8.47□□□□□ -1.05
COL4A6-201ENST00000334504 H3BTX0 84 aa8.47□□□□□ -1.05
COL4A6-201ENST00000334504 SLC17A3O00476 420 aa8.47□□□□□ -1.05
COL4A6-201ENST00000334504 S1PR2O95136 353 aa8.47□□□□□ -1.05
COL4A6-201ENST00000334504 CLDN14O95500 239 aa8.47□□□□□ -1.05
COL4A6-201ENST00000334504 COX6B1P14854 86 aa8.47□□□□□ -1.05
COL4A6-201ENST00000334504 TRIP6Q15654 476 aaKnown RBP8.47□□□□□ -1.05
COL4A6-201ENST00000334504 UBALD2Q8IYN6 164 aa8.47□□□□□ -1.05
COL4A6-201ENST00000334504 FAM19A2Q8N3H0 131 aa8.47□□□□□ -1.05
COL4A6-201ENST00000334504 ZNF714Q96N38 554 aa8.47□□□□□ -1.05
COL4A6-201ENST00000334504 SF3B5Q9BWJ5 86 aaKnown RBP8.47□□□□□ -1.05
COL4A6-201ENST00000334504 HRKO00198 91 aa8.47□□□□□ -1.05
COL4A6-201ENST00000334504 APOMO95445 188 aa8.47□□□□□ -1.05
COL4A6-201ENST00000334504 POC1AQ8NBT0 407 aa8.47□□□□□ -1.05
COL4A6-201ENST00000334504 DPH3P1Q9H4G8 78 aa8.47□□□□□ -1.05
COL4A6-201ENST00000334504 A0A0U1RQV5 110 aa8.47□□□□□ -1.05
COL4A6-201ENST00000334504 MMDQ15546 238 aa8.47□□□□□ -1.05
COL4A6-201ENST00000334504 SSBP4Q9BWG4 385 aaPredicted RBP8.47□□□□□ -1.05
COL4A6-201ENST00000334504 NPDC1Q9NQX5 325 aaPredicted RBP8.47□□□□□ -1.05
COL4A6-201ENST00000334504 IL36BQ9NZH7 164 aa8.47□□□□□ -1.05
COL4A6-201ENST00000334504 C1RLQ9NZP8 487 aa8.47□□□□□ -1.05
COL4A6-201ENST00000334504 CDK5RAP2Q96SN8 1893 aa8.47□□□□□ -1.05
COL4A6-201ENST00000334504 LMO7DNF2Z398 122 aa8.47□□□□□ -1.05
COL4A6-201ENST00000334504 GPR183P32249 361 aa8.47□□□□□ -1.05
COL4A6-201ENST00000334504 ZP1P60852 638 aa8.47□□□□□ -1.05
COL4A6-201ENST00000334504 TPRX1Q8N7U7 411 aa8.47□□□□□ -1.05
COL4A6-201ENST00000334504 C5orf30Q96GV9 206 aa8.47□□□□□ -1.05
COL4A6-201ENST00000334504 ZIC3O60481 467 aa8.47□□□□□ -1.05
COL4A6-201ENST00000334504 ZG16O60844 167 aa8.47□□□□□ -1.05
COL4A6-201ENST00000334504 ITGBL1O95965 494 aaPredicted RBP8.47□□□□□ -1.05
COL4A6-201ENST00000334504 APOHP02749 345 aaPredicted RBP8.47□□□□□ -1.05
COL4A6-201ENST00000334504 C8orf88P0DMB2 117 aa8.47□□□□□ -1.05
COL4A6-201ENST00000334504 UNC119Q13432 240 aa8.47□□□□□ -1.05
COL4A6-201ENST00000334504 C2orf68Q2NKX9 166 aa8.47□□□□□ -1.05
COL4A6-201ENST00000334504 TMEM170BQ5T4T1 132 aa8.47□□□□□ -1.05
COL4A6-201ENST00000334504 HCP5Q6MZN7 132 aa8.47□□□□□ -1.05
COL4A6-201ENST00000334504 GALNT14Q96FL9 552 aa8.47□□□□□ -1.05
COL4A6-201ENST00000334504 LOC390937A0A1W2PQ73 354 aa8.46□□□□□ -1.05
COL4A6-201ENST00000334504 ZNF324BQ6AW86 544 aaPredicted RBP8.46□□□□□ -1.05
COL4A6-201ENST00000334504 TFPI2P48307 235 aa8.46□□□□□ -1.05
COL4A6-201ENST00000334504 SNAI3Q3KNW1 292 aa8.46□□□□□ -1.05
COL4A6-201ENST00000334504 TOGARAM1Q9Y4F4 1720 aa8.46□□□□□ -1.06
COL4A6-201ENST00000334504 TRBV20OR9-2A0A075B6H5 130 aa8.46□□□□□ -1.06
COL4A6-201ENST00000334504 LOXL3P58215 753 aa8.46□□□□□ -1.06
COL4A6-201ENST00000334504 FGFRL1Q8N441 504 aa8.46□□□□□ -1.06
COL4A6-201ENST00000334504 DYNLRB2Q8TF09 96 aa8.46□□□□□ -1.06
COL4A6-201ENST00000334504 SS18L1O75177 396 aaPredicted RBP8.46□□□□□ -1.06
COL4A6-201ENST00000334504 SRFP11831 508 aa8.46□□□□□ -1.06
COL4A6-201ENST00000334504 PRDX2P32119 198 aa8.46□□□□□ -1.06
COL4A6-201ENST00000334504 GPR6P46095 362 aaPredicted RBP8.46□□□□□ -1.06
COL4A6-201ENST00000334504 Q6ZS52 159 aa8.46□□□□□ -1.06
COL4A6-201ENST00000334504 C1orf210Q8IVY1 113 aa8.46□□□□□ -1.06
COL4A6-201ENST00000334504 UCN2Q96RP3 112 aa8.46□□□□□ -1.06
COL4A6-201ENST00000334504 METTL26Q96S19 204 aa8.46□□□□□ -1.06
COL4A6-201ENST00000334504 AICDAQ9GZX7 198 aa8.46□□□□□ -1.06
COL4A6-201ENST00000334504 GEMIN7Q9H840 131 aaKnown RBP8.46□□□□□ -1.06
COL4A6-201ENST00000334504 COL16A1Q07092 1604 aaPredicted RBP8.46□□□□□ -1.06
COL4A6-201ENST00000334504 GCHFRP30047 84 aa8.46□□□□□ -1.06
COL4A6-201ENST00000334504 TMEM187Q14656 261 aa8.46□□□□□ -1.06
COL4A6-201ENST00000334504 ASCL5Q7RTU5 278 aa8.46□□□□□ -1.06
COL4A6-201ENST00000334504 RAB1CQ92928 201 aa8.46□□□□□ -1.06
COL4A6-201ENST00000334504 VENTXO95231 258 aa8.45□□□□□ -1.06
COL4A6-201ENST00000334504 LAMTOR1Q6IAA8 161 aa8.45□□□□□ -1.06
COL4A6-201ENST00000334504 SPINK14Q6IE38 97 aa8.45□□□□□ -1.06
COL4A6-201ENST00000334504 LIMS2Q7Z4I7 341 aa8.45□□□□□ -1.06
COL4A6-201ENST00000334504 OR4A5Q8NH83 315 aa8.45□□□□□ -1.06
COL4A6-201ENST00000334504 FBLIM1Q8WUP2 373 aa8.45□□□□□ -1.06
COL4A6-201ENST00000334504 RAB1BQ9H0U4 201 aa8.45□□□□□ -1.06
COL4A6-201ENST00000334504 SERGEFQ9UGK8 458 aa8.45□□□□□ -1.06
COL4A6-201ENST00000334504 TAF1P21675 1872 aa8.45□□□□□ -1.06
COL4A6-201ENST00000334504 CENPVL1A0A0U1RR11 272 aa8.45□□□□□ -1.06
COL4A6-201ENST00000334504 SELENOTP62341 195 aa8.45□□□□□ -1.06
COL4A6-201ENST00000334504 A0A1B0GUL6 1792 aa8.45□□□□□ -1.06
COL4A6-201ENST00000334504 PPIAL4DF5H284 164 aa8.45□□□□□ -1.06
COL4A6-201ENST00000334504 IGHV4-39P01824 125 aa8.45□□□□□ -1.06
COL4A6-201ENST00000334504 RPL27AP46776 148 aaKnown RBP8.45□□□□□ -1.06
COL4A6-201ENST00000334504 PSG9Q00887 426 aa8.45□□□□□ -1.06
COL4A6-201ENST00000334504 GUSBP11Q6P575 273 aa8.45□□□□□ -1.06
COL4A6-201ENST00000334504 IGKV3OR2-268A0A0C4DH90 116 aa8.45□□□□□ -1.06
COL4A6-201ENST00000334504 UBE2CO00762 179 aa8.45□□□□□ -1.06
COL4A6-201ENST00000334504 RAMP1O60894 148 aa8.45□□□□□ -1.06
COL4A6-201ENST00000334504 CD8AP01732 235 aa8.45□□□□□ -1.06
COL4A6-201ENST00000334504 SRP19P09132 144 aaKnown RBP8.45□□□□□ -1.06
COL4A6-201ENST00000334504 LINC00614P0C842 121 aa8.45□□□□□ -1.06
COL4A6-201ENST00000334504 IL9P15248 144 aa8.45□□□□□ -1.06
COL4A6-201ENST00000334504 RND2P52198 227 aa8.45□□□□□ -1.06
COL4A6-201ENST00000334504 EBLN2Q6P2I7 272 aa8.45□□□□□ -1.06
COL4A6-201ENST00000334504 PTPRZ1P23471 2315 aaPredicted RBP8.45□□□□□ -1.06
COL4A6-201ENST00000334504 TRAV8-4A0A0B4J246 113 aa8.45□□□□□ -1.06
COL4A6-201ENST00000334504 TRAV17A0A0B4J275 112 aa8.45□□□□□ -1.06
COL4A6-201ENST00000334504 K7N7A8 449 aa8.45□□□□□ -1.06
COL4A6-201ENST00000334504 TMEM50AO95807 157 aa8.45□□□□□ -1.06
COL4A6-201ENST00000334504 ZNF708P17019 499 aa8.45□□□□□ -1.06
COL4A6-201ENST00000334504 PRELID3AQ96N28 172 aa8.45□□□□□ -1.06
COL4A6-201ENST00000334504 SDHCQ99643 169 aaPredicted RBP8.45□□□□□ -1.06
COL4A6-201ENST00000334504 SPAARA0A1B0GVQ0 90 aa8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 96.6 ms