RNA–Protein interactions for RNA: ENST00000334133.8

RFTN1-201, Transcript of raftlin, lipid raft linker 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RFTN1, Length 2,982 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFTN1-201ENST00000334133 BTBD17A6NE02 478 aa15.75■□□□□ 0.11
RFTN1-201ENST00000334133 C15orf65H3BRN8 121 aa15.75■□□□□ 0.11
RFTN1-201ENST00000334133 SPINT2O43291 252 aa15.75■□□□□ 0.11
RFTN1-201ENST00000334133 ZNF737O75373 536 aa15.75■□□□□ 0.11
RFTN1-201ENST00000334133 WNT2P09544 360 aa15.75■□□□□ 0.11
RFTN1-201ENST00000334133 BMP5P22003 454 aa15.75■□□□□ 0.11
RFTN1-201ENST00000334133 TGIF2LYQ8IUE0 185 aa15.75■□□□□ 0.11
RFTN1-201ENST00000334133 IQCF2Q8IXL9 164 aa15.75■□□□□ 0.11
RFTN1-201ENST00000334133 PRR7Q8TB68 274 aa15.75■□□□□ 0.11
RFTN1-201ENST00000334133 ITLN1Q8WWA0 313 aa15.75■□□□□ 0.11
RFTN1-201ENST00000334133 C12orf57Q99622 126 aa15.75■□□□□ 0.11
RFTN1-201ENST00000334133 CTNNBIP1Q9NSA3 81 aaPredicted RBP15.75■□□□□ 0.11
RFTN1-201ENST00000334133 HSPB7Q9UBY9 170 aa15.75■□□□□ 0.11
RFTN1-201ENST00000334133 YLPM1P49750 1951 aaKnown RBP15.75■□□□□ 0.11
RFTN1-201ENST00000334133 MBD3L4A6NDZ8 208 aaPredicted RBP15.75■□□□□ 0.11
RFTN1-201ENST00000334133 MBD3L3A6NE82 208 aaPredicted RBP15.75■□□□□ 0.11
RFTN1-201ENST00000334133 MBD3L5A6NJ08 208 aaPredicted RBP15.75■□□□□ 0.11
RFTN1-201ENST00000334133 S100A6P06703 90 aa15.75■□□□□ 0.11
RFTN1-201ENST00000334133 TFF3Q07654 80 aa15.75■□□□□ 0.11
RFTN1-201ENST00000334133 MSMO1Q15800 293 aa15.75■□□□□ 0.11
RFTN1-201ENST00000334133 MBD3L2Q8NHZ7 208 aaPredicted RBP15.75■□□□□ 0.11
RFTN1-201ENST00000334133 DTD1Q8TEA8 209 aa15.75■□□□□ 0.11
RFTN1-201ENST00000334133 SLC25A22Q9H936 323 aa15.75■□□□□ 0.11
RFTN1-201ENST00000334133 CRYAAP02489 173 aa15.75■□□□□ 0.11
RFTN1-201ENST00000334133 ZNF134P52741 427 aa15.75■□□□□ 0.11
RFTN1-201ENST00000334133 EGLN1Q9GZT9 426 aa15.75■□□□□ 0.11
RFTN1-201ENST00000334133 POLEQ07864 2286 aa15.74■□□□□ 0.11
RFTN1-201ENST00000334133 LOC102723971A0A1B0GUV8 181 aa15.74■□□□□ 0.11
RFTN1-201ENST00000334133 MARCH11A6NNE9 402 aa15.74■□□□□ 0.11
RFTN1-201ENST00000334133 HBE1P02100 147 aa15.74■□□□□ 0.11
RFTN1-201ENST00000334133 GPR12P47775 334 aa15.74■□□□□ 0.11
RFTN1-201ENST00000334133 EIF2S3LQ2VIR3 472 aaKnown RBP15.74■□□□□ 0.11
RFTN1-201ENST00000334133 TMEM14EPQ6UXP3 125 aa15.74■□□□□ 0.11
RFTN1-201ENST00000334133 RBMS3Q6XE24 437 aaKnown RBP15.74■□□□□ 0.11
RFTN1-201ENST00000334133 QTRT1Q9BXR0 403 aaKnown RBP15.74■□□□□ 0.11
RFTN1-201ENST00000334133 ZNF98A6NK75 572 aa15.74■□□□□ 0.11
RFTN1-201ENST00000334133 ACSM6Q6P461 480 aa15.74■□□□□ 0.11
RFTN1-201ENST00000334133 RPP25LQ8N5L8 163 aaKnown RBP15.74■□□□□ 0.11
RFTN1-201ENST00000334133 PIGBOS1A0A0B4J2F0 54 aa15.73■□□□□ 0.11
RFTN1-201ENST00000334133 SRRM5B3KS81 715 aa15.73■□□□□ 0.11
RFTN1-201ENST00000334133 M0R1X1 148 aa15.73■□□□□ 0.11
RFTN1-201ENST00000334133 CEACAM4O75871 244 aa15.73■□□□□ 0.11
RFTN1-201ENST00000334133 HSPB1P04792 205 aaKnown RBP15.73■□□□□ 0.11
RFTN1-201ENST00000334133 OR9G9P0C7N8 305 aa15.73■□□□□ 0.11
RFTN1-201ENST00000334133 P0C879 139 aa15.73■□□□□ 0.11
RFTN1-201ENST00000334133 HOXA1P49639 335 aaPredicted RBP15.73■□□□□ 0.11
RFTN1-201ENST00000334133 LURAP1Q96LR2 239 aa15.73■□□□□ 0.11
RFTN1-201ENST00000334133 NIPSNAP3BQ9BS92 247 aa15.73■□□□□ 0.11
RFTN1-201ENST00000334133 KLF2Q9Y5W3 355 aaPredicted RBP15.73■□□□□ 0.11
RFTN1-201ENST00000334133 MAP1LC3B2A6NCE7 125 aa15.73■□□□□ 0.11
RFTN1-201ENST00000334133 IFNL4K9M1U5 179 aa15.73■□□□□ 0.11
RFTN1-201ENST00000334133 SLC31A2O15432 143 aa15.73■□□□□ 0.11
RFTN1-201ENST00000334133 MAP1LC3BQ9GZQ8 125 aa15.73■□□□□ 0.11
RFTN1-201ENST00000334133 DCAF16Q9NXF7 216 aa15.73■□□□□ 0.11
RFTN1-201ENST00000334133 IFNA17P01571 189 aa15.72■□□□□ 0.11
RFTN1-201ENST00000334133 RPS10P46783 165 aaKnown RBP15.72■□□□□ 0.11
RFTN1-201ENST00000334133 KLF3P57682 345 aaPredicted RBP15.72■□□□□ 0.11
RFTN1-201ENST00000334133 ZBTB34Q8NCN2 500 aa15.72■□□□□ 0.11
RFTN1-201ENST00000334133 GATAD1Q8WUU5 269 aa15.72■□□□□ 0.11
RFTN1-201ENST00000334133 R3HDM4Q96D70 268 aa15.72■□□□□ 0.11
RFTN1-201ENST00000334133 MUCL1Q96DR8 90 aa15.72■□□□□ 0.11
RFTN1-201ENST00000334133 CLDN14O95500 239 aa15.72■□□□□ 0.11
RFTN1-201ENST00000334133 FOLR2P14207 255 aa15.72■□□□□ 0.11
RFTN1-201ENST00000334133 FGF7P21781 194 aa15.72■□□□□ 0.11
RFTN1-201ENST00000334133 C1orf229Q6ZS94 237 aaPredicted RBP15.72■□□□□ 0.11
RFTN1-201ENST00000334133 ZCCHC24Q8N2G6 241 aaKnown RBP15.72■□□□□ 0.11
RFTN1-201ENST00000334133 MEGF10Q96KG7 1140 aa15.72■□□□□ 0.11
RFTN1-201ENST00000334133 PPIHO43447 177 aaKnown RBP15.72■□□□□ 0.11
RFTN1-201ENST00000334133 CYB5R3P00387 301 aaPredicted RBP15.72■□□□□ 0.11
RFTN1-201ENST00000334133 BCL2P10415 239 aa15.72■□□□□ 0.11
RFTN1-201ENST00000334133 NQO2P16083 231 aa15.72■□□□□ 0.11
RFTN1-201ENST00000334133 TCF15Q12870 199 aa15.72■□□□□ 0.11
RFTN1-201ENST00000334133 RBMXL3Q8N7X1 1067 aaKnown RBP15.72■□□□□ 0.11
RFTN1-201ENST00000334133 LHX4Q969G2 390 aa15.72■□□□□ 0.11
RFTN1-201ENST00000334133 COA4Q9NYJ1 87 aa15.72■□□□□ 0.11
RFTN1-201ENST00000334133 TRAV3A0A0B4J244 114 aa15.71■□□□□ 0.11
RFTN1-201ENST00000334133 ERVFRD-1P60508 538 aa15.71■□□□□ 0.11
RFTN1-201ENST00000334133 MORN2Q502X0 79 aa15.71■□□□□ 0.11
RFTN1-201ENST00000334133 KHDC3LQ587J8 217 aa15.71■□□□□ 0.11
RFTN1-201ENST00000334133 ZNF561Q8N587 486 aa15.71■□□□□ 0.11
RFTN1-201ENST00000334133 SNRNP40Q96DI7 357 aaKnown RBP15.71■□□□□ 0.11
RFTN1-201ENST00000334133 MRPL37Q9BZE1 423 aaKnown RBP15.71■□□□□ 0.11
RFTN1-201ENST00000334133 TUBA4BQ9H853 241 aa15.71■□□□□ 0.11
RFTN1-201ENST00000334133 SLC39A9Q9NUM3 307 aa15.71■□□□□ 0.11
RFTN1-201ENST00000334133 ARFGEF3Q5TH69 2177 aa15.71■□□□□ 0.11
RFTN1-201ENST00000334133 CXCL1P09341 107 aa15.71■□□□□ 0.11
RFTN1-201ENST00000334133 AGAP20933 346 aa15.71■□□□□ 0.11
RFTN1-201ENST00000334133 FABP9Q0Z7S8 132 aa15.71■□□□□ 0.11
RFTN1-201ENST00000334133 ZNF674Q2M3X9 581 aa15.71■□□□□ 0.11
RFTN1-201ENST00000334133 TMEM41BQ5BJD5 291 aa15.71■□□□□ 0.11
RFTN1-201ENST00000334133 OR10P1Q8NGE3 313 aa15.71■□□□□ 0.11
RFTN1-201ENST00000334133 TVP23CQ96ET8 276 aa15.71■□□□□ 0.11
RFTN1-201ENST00000334133 UNKLQ9H9P5 680 aaKnown RBP15.71■□□□□ 0.11
RFTN1-201ENST00000334133 TGIF2-C20orf24A0A0A6YYL0 155 aa15.7■□□□□ 0.1
RFTN1-201ENST00000334133 PAX6P26367 422 aa15.7■□□□□ 0.1
RFTN1-201ENST00000334133 DUTP33316 252 aaKnown RBP15.7■□□□□ 0.1
RFTN1-201ENST00000334133 FAM90A2PQ658T7 463 aa15.7■□□□□ 0.1
RFTN1-201ENST00000334133 Q8TCH9 128 aa15.7■□□□□ 0.1
RFTN1-201ENST00000334133 PSMG3Q9BT73 122 aaPredicted RBP15.7■□□□□ 0.1
RFTN1-201ENST00000334133 SMDT1Q9H4I9 107 aa15.7■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 106.3 ms