RNA–Protein interactions for RNA: ENST00000309190.9

CAST-201, Transcript of calpastatin, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CAST, Length 4,282 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-201ENST00000309190 PPP1R1AQ13522 171 aa4.11□□□□□ -1.75
CAST-201ENST00000309190 Q3ZCU0 254 aa4.11□□□□□ -1.75
CAST-201ENST00000309190 RPL39P5Q59GN2 51 aa4.11□□□□□ -1.75
CAST-201ENST00000309190 ELP2Q6IA86 826 aa4.11□□□□□ -1.75
CAST-201ENST00000309190 LHFPL4Q7Z7J7 247 aa4.11□□□□□ -1.75
CAST-201ENST00000309190 OR10R2Q8NGX6 335 aa4.11□□□□□ -1.75
CAST-201ENST00000309190 PP6455Q8WZ26 134 aa4.11□□□□□ -1.75
CAST-201ENST00000309190 OR5P3Q8WZ94 311 aa4.11□□□□□ -1.75
CAST-201ENST00000309190 FAM168AQ92567 244 aa4.11□□□□□ -1.75
CAST-201ENST00000309190 GSN-AS1Q9NRJ2 163 aa4.11□□□□□ -1.75
CAST-201ENST00000309190 C19orf12Q9NSK7 152 aa4.11□□□□□ -1.75
CAST-201ENST00000309190 METTL1Q9UBP6 276 aaKnown RBP4.11□□□□□ -1.75
CAST-201ENST00000309190 GPR132Q9UNW8 380 aa4.11□□□□□ -1.75
CAST-201ENST00000309190 VWFP04275 2813 aa4.11□□□□□ -1.75
CAST-201ENST00000309190 MEGF11A6BM72 1044 aa4.1□□□□□ -1.75
CAST-201ENST00000309190 TMEM8BA6NDV4 472 aa4.1□□□□□ -1.75
CAST-201ENST00000309190 KIAA1324LA8MWY0 1029 aaPredicted RBP4.1□□□□□ -1.75
CAST-201ENST00000309190 OR5H8P0DN80 308 aa4.1□□□□□ -1.75
CAST-201ENST00000309190 RPS23P62266 143 aaKnown RBP4.1□□□□□ -1.75
CAST-201ENST00000309190 DNLZQ5SXM8 178 aa4.1□□□□□ -1.75
CAST-201ENST00000309190 NCMAPQ5T1S8 102 aa4.1□□□□□ -1.75
CAST-201ENST00000309190 STEAP1BQ6NZ63 245 aa4.1□□□□□ -1.75
CAST-201ENST00000309190 SPNS3Q6ZMD2 512 aa4.1□□□□□ -1.75
CAST-201ENST00000309190 IL34Q6ZMJ4 242 aa4.1□□□□□ -1.75
CAST-201ENST00000309190 LCNL1Q6ZST4 164 aa4.1□□□□□ -1.75
CAST-201ENST00000309190 FOXL2NBQ6ZUU3 175 aa4.1□□□□□ -1.75
CAST-201ENST00000309190 CD177Q8N6Q3 437 aa4.1□□□□□ -1.75
CAST-201ENST00000309190 OR10X1Q8NGY0 326 aa4.1□□□□□ -1.75
CAST-201ENST00000309190 TIMD4Q96H15 378 aa4.1□□□□□ -1.75
CAST-201ENST00000309190 CXXC4Q9H2H0 198 aa4.1□□□□□ -1.75
CAST-201ENST00000309190 C7orf69Q9H7B7 122 aa4.1□□□□□ -1.75
CAST-201ENST00000309190 KCNIP1Q9NZI2 227 aa4.1□□□□□ -1.75
CAST-201ENST00000309190 LOC105371242A0A075B767 164 aa4.1□□□□□ -1.75
CAST-201ENST00000309190 IGHV4-61A0A0C4DH41 118 aa4.1□□□□□ -1.75
CAST-201ENST00000309190 MFNGO00587 321 aa4.1□□□□□ -1.75
CAST-201ENST00000309190 WNT2P09544 360 aa4.1□□□□□ -1.75
CAST-201ENST00000309190 MYOD1P15172 320 aa4.1□□□□□ -1.75
CAST-201ENST00000309190 BTF3P20290 206 aaKnown RBP4.1□□□□□ -1.75
CAST-201ENST00000309190 CAV2P51636 162 aa4.1□□□□□ -1.75
CAST-201ENST00000309190 SMIM21Q3B7S5 101 aa4.1□□□□□ -1.75
CAST-201ENST00000309190 DEGS2Q6QHC5 323 aa4.1□□□□□ -1.75
CAST-201ENST00000309190 UBAC2Q8NBM4 344 aa4.1□□□□□ -1.75
CAST-201ENST00000309190 PPP1R1CQ8WVI7 109 aa4.1□□□□□ -1.75
CAST-201ENST00000309190 YAE1D1Q9NRH1 226 aa4.1□□□□□ -1.75
CAST-201ENST00000309190 CCL28Q9NRJ3 127 aa4.1□□□□□ -1.75
CAST-201ENST00000309190 ADAP1O75689 374 aa4.1□□□□□ -1.75
CAST-201ENST00000309190 CRYBA1P05813 215 aa4.1□□□□□ -1.75
CAST-201ENST00000309190 FUT3P21217 361 aa4.1□□□□□ -1.75
CAST-201ENST00000309190 LPAR6P43657 344 aa4.1□□□□□ -1.75
CAST-201ENST00000309190 MFAP4P55083 255 aa4.1□□□□□ -1.75
CAST-201ENST00000309190 CLEC12BQ2HXU8 276 aa4.1□□□□□ -1.75
CAST-201ENST00000309190 COQ8AQ8NI60 647 aa4.1□□□□□ -1.75
CAST-201ENST00000309190 SFT2D1Q8WV19 159 aa4.1□□□□□ -1.75
CAST-201ENST00000309190 OR51I2Q9H344 312 aa4.1□□□□□ -1.75
CAST-201ENST00000309190 PRDM13Q9H4Q3 707 aa4.1□□□□□ -1.75
CAST-201ENST00000309190 UQCC1Q9NVA1 299 aa4.1□□□□□ -1.75
CAST-201ENST00000309190 ZNF835Q9Y2P0 537 aa4.1□□□□□ -1.75
CAST-201ENST00000309190 FAM96BQ9Y3D0 163 aa4.1□□□□□ -1.75
CAST-201ENST00000309190 TRAV40A0A0B4J280 105 aa4.09□□□□□ -1.75
CAST-201ENST00000309190 M0R1X1 148 aa4.09□□□□□ -1.75
CAST-201ENST00000309190 IGHV4-39P01824 125 aa4.09□□□□□ -1.75
CAST-201ENST00000309190 IFNA4P05014 189 aa4.09□□□□□ -1.75
CAST-201ENST00000309190 SMIM6P0DI80 62 aa4.09□□□□□ -1.75
CAST-201ENST00000309190 SRP14P37108 136 aaKnown RBP4.09□□□□□ -1.75
CAST-201ENST00000309190 HIST1H3AP68431 136 aa4.09□□□□□ -1.75
CAST-201ENST00000309190 MEF2DQ14814 521 aa4.09□□□□□ -1.75
CAST-201ENST00000309190 ANKRD55Q3KP44 614 aa4.09□□□□□ -1.75
CAST-201ENST00000309190 HIST2H3PS2Q5TEC6 136 aa4.09□□□□□ -1.75
CAST-201ENST00000309190 ETFRF1Q6IPR1 90 aa4.09□□□□□ -1.75
CAST-201ENST00000309190 C19orf35Q6ZS72 473 aa4.09□□□□□ -1.75
CAST-201ENST00000309190 HIST2H3AQ71DI3 136 aa4.09□□□□□ -1.75
CAST-201ENST00000309190 DMRTC2Q8IXT2 367 aaPredicted RBP4.09□□□□□ -1.75
CAST-201ENST00000309190 HIST1H2BAQ96A08 127 aa4.09□□□□□ -1.75
CAST-201ENST00000309190 PINX1Q96BK5 328 aaKnown RBP4.09□□□□□ -1.75
CAST-201ENST00000309190 UBE2J1Q9Y385 318 aaPredicted RBP4.09□□□□□ -1.75
CAST-201ENST00000309190 IGKV1D-17A0A075B6S4 117 aa4.09□□□□□ -1.75
CAST-201ENST00000309190 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP4.09□□□□□ -1.75
CAST-201ENST00000309190 IFNL4K9M1U5 179 aa4.09□□□□□ -1.75
CAST-201ENST00000309190 TAS2R19P59542 299 aa4.09□□□□□ -1.75
CAST-201ENST00000309190 TMEM217Q8N7C4 229 aa4.09□□□□□ -1.75
CAST-201ENST00000309190 LRTM2Q8N967 370 aa4.09□□□□□ -1.75
CAST-201ENST00000309190 OR5A2Q8NGI9 324 aa4.09□□□□□ -1.75
CAST-201ENST00000309190 RAB1CQ92928 201 aa4.09□□□□□ -1.75
CAST-201ENST00000309190 PECRQ9BY49 303 aa4.09□□□□□ -1.75
CAST-201ENST00000309190 MFFQ9GZY8 342 aa4.09□□□□□ -1.75
CAST-201ENST00000309190 OR2D2Q9H210 308 aa4.09□□□□□ -1.75
CAST-201ENST00000309190 HIF1ANQ9NWT6 349 aa4.09□□□□□ -1.75
CAST-201ENST00000309190 ELOVL5Q9NYP7 299 aa4.09□□□□□ -1.75
CAST-201ENST00000309190 OR5AC2Q9NZP5 309 aa4.09□□□□□ -1.75
CAST-201ENST00000309190 POLDIP2Q9Y2S7 368 aa4.09□□□□□ -1.75
CAST-201ENST00000309190 IGHV3OR16-13A0A075B7E8 117 aa4.09□□□□□ -1.75
CAST-201ENST00000309190 IGHV3-74A0A0B4J1X5 117 aa4.09□□□□□ -1.75
CAST-201ENST00000309190 TRAV24A0A0B4J272 114 aa4.09□□□□□ -1.75
CAST-201ENST00000309190 A0A0U1RQV5 110 aa4.09□□□□□ -1.75
CAST-201ENST00000309190 J3QT63 122 aa4.09□□□□□ -1.75
CAST-201ENST00000309190 TSPAN4O14817 238 aa4.09□□□□□ -1.75
CAST-201ENST00000309190 SCAF4O95104 1147 aaKnown RBP4.09□□□□□ -1.75
CAST-201ENST00000309190 REG1AP05451 166 aa4.09□□□□□ -1.75
CAST-201ENST00000309190 SULT1A2P50226 295 aa4.09□□□□□ -1.75
CAST-201ENST00000309190 OR2B8PP59922 312 aa4.09□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms