RNA–Protein interactions for RNA: ENST00000297405.9

CSMD3-201, Transcript of CUB and Sushi multiple domains 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSMD3, Length 13,212 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-201ENST00000297405 MLNRO43193 412 aa4.24□□□□□ -1.73
CSMD3-201ENST00000297405 DEFB128Q7Z7B8 93 aa4.24□□□□□ -1.73
CSMD3-201ENST00000297405 ZADH2Q8N4Q0 377 aa4.24□□□□□ -1.73
CSMD3-201ENST00000297405 H3BMM0 161 aa4.24□□□□□ -1.73
CSMD3-201ENST00000297405 HS3ST1O14792 307 aa4.24□□□□□ -1.73
CSMD3-201ENST00000297405 LGALS7P47929 136 aa4.24□□□□□ -1.73
CSMD3-201ENST00000297405 RHBDD2Q6NTF9 364 aa4.24□□□□□ -1.73
CSMD3-201ENST00000297405 LPPQ93052 612 aa4.24□□□□□ -1.73
CSMD3-201ENST00000297405 PAXXQ9BUH6 204 aa4.24□□□□□ -1.73
CSMD3-201ENST00000297405 SLCO1C1Q9NYB5 712 aa4.24□□□□□ -1.73
CSMD3-201ENST00000297405 PISDQ9UG56 409 aa4.24□□□□□ -1.73
CSMD3-201ENST00000297405 HS3ST3B1Q9Y662 390 aa4.24□□□□□ -1.73
CSMD3-201ENST00000297405 KCPQ6ZWJ8 1503 aa4.24□□□□□ -1.73
CSMD3-201ENST00000297405 IGLV3-10A0A075B6K4 115 aa4.24□□□□□ -1.73
CSMD3-201ENST00000297405 NDUFA2O43678 99 aa4.24□□□□□ -1.73
CSMD3-201ENST00000297405 SYNGR1O43759 233 aa4.24□□□□□ -1.73
CSMD3-201ENST00000297405 ASAH2BP0C7U1 165 aa4.24□□□□□ -1.73
CSMD3-201ENST00000297405 C9orf153Q5TBE3 101 aa4.24□□□□□ -1.73
CSMD3-201ENST00000297405 GPR82Q96P67 336 aa4.24□□□□□ -1.73
CSMD3-201ENST00000297405 IL23AQ9NPF7 189 aa4.24□□□□□ -1.73
CSMD3-201ENST00000297405 F5H697 171 aa4.24□□□□□ -1.73
CSMD3-201ENST00000297405 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP4.24□□□□□ -1.73
CSMD3-201ENST00000297405 EPPINO95925 133 aa4.24□□□□□ -1.73
CSMD3-201ENST00000297405 TRACP01848 142 aa4.24□□□□□ -1.73
CSMD3-201ENST00000297405 PSG5Q15238 335 aa4.24□□□□□ -1.73
CSMD3-201ENST00000297405 WIPI1Q5MNZ9 446 aaPredicted RBP4.24□□□□□ -1.73
CSMD3-201ENST00000297405 C4orf45Q96LM5 186 aa4.24□□□□□ -1.73
CSMD3-201ENST00000297405 IL36BQ9NZH7 164 aa4.24□□□□□ -1.73
CSMD3-201ENST00000297405 MMP17Q9ULZ9 603 aa4.24□□□□□ -1.73
CSMD3-201ENST00000297405 USP9YO00507 2555 aaPredicted RBP4.24□□□□□ -1.73
CSMD3-201ENST00000297405 A8MWP6 167 aa4.24□□□□□ -1.73
CSMD3-201ENST00000297405 IFNL4K9M1U5 179 aa4.24□□□□□ -1.73
CSMD3-201ENST00000297405 PRRG2O14669 202 aa4.24□□□□□ -1.73
CSMD3-201ENST00000297405 RRHO14718 337 aa4.24□□□□□ -1.73
CSMD3-201ENST00000297405 ZNF205O95201 554 aa4.24□□□□□ -1.73
CSMD3-201ENST00000297405 GABRG2P18507 467 aa4.24□□□□□ -1.73
CSMD3-201ENST00000297405 LIN28BQ6ZN17 250 aaKnown RBP eCLIP4.24□□□□□ -1.73
CSMD3-201ENST00000297405 ZNF511Q8NB15 262 aa4.24□□□□□ -1.73
CSMD3-201ENST00000297405 A0A0B4J2E0 115 aa4.24□□□□□ -1.73
CSMD3-201ENST00000297405 A0A1B0GX12 115 aa4.24□□□□□ -1.73
CSMD3-201ENST00000297405 WNT9BO14905 357 aa4.24□□□□□ -1.73
CSMD3-201ENST00000297405 PLA2G10O15496 165 aa4.24□□□□□ -1.73
CSMD3-201ENST00000297405 CD40P25942 277 aa4.24□□□□□ -1.73
CSMD3-201ENST00000297405 SELENOPP49908 381 aa4.24□□□□□ -1.73
CSMD3-201ENST00000297405 NOGQ13253 232 aa4.24□□□□□ -1.73
CSMD3-201ENST00000297405 PIANPQ8IYJ0 282 aa4.24□□□□□ -1.73
CSMD3-201ENST00000297405 TCEAL8Q8IYN2 117 aa4.24□□□□□ -1.73
CSMD3-201ENST00000297405 APCDD1LQ8NCL9 501 aa4.24□□□□□ -1.73
CSMD3-201ENST00000297405 OR4D11Q8NGI4 311 aa4.24□□□□□ -1.73
CSMD3-201ENST00000297405 PHLDA1Q8WV24 401 aaPredicted RBP4.24□□□□□ -1.73
CSMD3-201ENST00000297405 FER1L6-AS2Q96M78 137 aa4.24□□□□□ -1.73
CSMD3-201ENST00000297405 RNF122Q9H9V4 155 aa4.24□□□□□ -1.73
CSMD3-201ENST00000297405 GLRX2Q9NS18 164 aa4.24□□□□□ -1.73
CSMD3-201ENST00000297405 RPRMQ9NS64 109 aa4.24□□□□□ -1.73
CSMD3-201ENST00000297405 HOXA3O43365 443 aaPredicted RBP4.23□□□□□ -1.73
CSMD3-201ENST00000297405 SRFP11831 508 aa4.23□□□□□ -1.73
CSMD3-201ENST00000297405 ZNF585BQ52M93 769 aa4.23□□□□□ -1.73
CSMD3-201ENST00000297405 NEGR1Q7Z3B1 354 aa4.23□□□□□ -1.73
CSMD3-201ENST00000297405 OR11G2Q8NGC1 345 aa4.23□□□□□ -1.73
CSMD3-201ENST00000297405 DNAJB12Q9NXW2 375 aaKnown RBP4.23□□□□□ -1.73
CSMD3-201ENST00000297405 SS18L1O75177 396 aaPredicted RBP4.23□□□□□ -1.73
CSMD3-201ENST00000297405 IAPPP10997 89 aa4.23□□□□□ -1.73
CSMD3-201ENST00000297405 TNFRSF4P43489 277 aa4.23□□□□□ -1.73
CSMD3-201ENST00000297405 LRP12Q9Y561 859 aa4.23□□□□□ -1.73
CSMD3-201ENST00000297405 CHD8Q9HCK8 2581 aa4.23□□□□□ -1.73
CSMD3-201ENST00000297405 J3KTA2 159 aa4.23□□□□□ -1.73
CSMD3-201ENST00000297405 M0R2P5 195 aa4.23□□□□□ -1.73
CSMD3-201ENST00000297405 PLPP1O14494 284 aa4.23□□□□□ -1.73
CSMD3-201ENST00000297405 ZP1P60852 638 aa4.23□□□□□ -1.73
CSMD3-201ENST00000297405 SLC25A35Q3KQZ1 300 aa4.23□□□□□ -1.73
CSMD3-201ENST00000297405 LRRC75AQ8NAA5 344 aa4.23□□□□□ -1.73
CSMD3-201ENST00000297405 TM4SF18Q96CE8 201 aa4.23□□□□□ -1.73
CSMD3-201ENST00000297405 MARS2Q96GW9 593 aaKnown RBP4.23□□□□□ -1.73
CSMD3-201ENST00000297405 LINC00615Q96LM1 132 aaPredicted RBP4.23□□□□□ -1.73
CSMD3-201ENST00000297405 WRAP73Q9P2S5 460 aaPredicted RBP4.23□□□□□ -1.73
CSMD3-201ENST00000297405 B9D1Q9UPM9 204 aa4.23□□□□□ -1.73
CSMD3-201ENST00000297405 FRG2CA6NGY1 282 aa4.23□□□□□ -1.73
CSMD3-201ENST00000297405 EVI2AP22794 236 aa4.23□□□□□ -1.73
CSMD3-201ENST00000297405 RBM11P57052 281 aaKnown RBP4.23□□□□□ -1.73
CSMD3-201ENST00000297405 PFN3P60673 137 aa4.23□□□□□ -1.73
CSMD3-201ENST00000297405 PMP22Q01453 160 aa4.23□□□□□ -1.73
CSMD3-201ENST00000297405 LYPD8Q6UX82 237 aa4.23□□□□□ -1.73
CSMD3-201ENST00000297405 ZNF418Q8TF45 676 aaPredicted RBP4.23□□□□□ -1.73
CSMD3-201ENST00000297405 FSCN3Q9NQT6 498 aa4.23□□□□□ -1.73
CSMD3-201ENST00000297405 F2Z2F3 143 aa4.23□□□□□ -1.73
CSMD3-201ENST00000297405 NKX2-8O15522 239 aa4.23□□□□□ -1.73
CSMD3-201ENST00000297405 AJAP1Q9UKB5 411 aaPredicted RBP4.23□□□□□ -1.73
CSMD3-201ENST00000297405 KLHDC2Q9Y2U9 406 aa4.23□□□□□ -1.73
CSMD3-201ENST00000297405 LY96Q9Y6Y9 160 aa4.23□□□□□ -1.73
CSMD3-201ENST00000297405 MUC6Q6W4X9 2439 aa4.23□□□□□ -1.73
CSMD3-201ENST00000297405 TRAV2A0A0B4J234 112 aa4.23□□□□□ -1.73
CSMD3-201ENST00000297405 A0A0G2JLL6 359 aaPredicted RBP4.23□□□□□ -1.73
CSMD3-201ENST00000297405 FCN3O75636 299 aa4.23□□□□□ -1.73
CSMD3-201ENST00000297405 B3GALT4O96024 378 aa4.23□□□□□ -1.73
CSMD3-201ENST00000297405 IGHG4P01861 327 aa4.23□□□□□ -1.73
CSMD3-201ENST00000297405 COX20Q5RI15 118 aa4.23□□□□□ -1.73
CSMD3-201ENST00000297405 PRRT2Q7Z6L0 340 aaPredicted RBP4.23□□□□□ -1.73
CSMD3-201ENST00000297405 MMD2Q8IY49 270 aa4.23□□□□□ -1.73
CSMD3-201ENST00000297405 TMEM86BQ8N661 226 aa4.23□□□□□ -1.73
CSMD3-201ENST00000297405 IL36RNQ9UBH0 155 aa4.23□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 82.3 ms