RNA–Protein interactions for RNA: ENST00000239243.6

MSX2-201, Transcript of msh homeobox 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSX2, Length 2,241 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSX2-201ENST00000239243 H3BP45 60 aa19.23■□□□□ 0.67
MSX2-201ENST00000239243 TRIM77I1YAP6 450 aa19.23■□□□□ 0.67
MSX2-201ENST00000239243 HPRT1P00492 218 aa19.23■□□□□ 0.67
MSX2-201ENST00000239243 IAPPP10997 89 aa19.23■□□□□ 0.67
MSX2-201ENST00000239243 NDUFB7P17568 137 aa19.23■□□□□ 0.67
MSX2-201ENST00000239243 TCF23Q7RTU1 214 aa19.23■□□□□ 0.67
MSX2-201ENST00000239243 CA5BP1Q8WTZ4 195 aa19.23■□□□□ 0.67
MSX2-201ENST00000239243 PRORYQ9H606 182 aa19.23■□□□□ 0.67
MSX2-201ENST00000239243 B8ZZF3 427 aa19.23■□□□□ 0.67
MSX2-201ENST00000239243 PROP1O75360 226 aa19.23■□□□□ 0.67
MSX2-201ENST00000239243 ID4P47928 161 aa19.23■□□□□ 0.67
MSX2-201ENST00000239243 ARHGDIBP52566 201 aa19.23■□□□□ 0.67
MSX2-201ENST00000239243 ZNF134P52741 427 aa19.23■□□□□ 0.67
MSX2-201ENST00000239243 ADORA2A-AS1P86434 159 aa19.23■□□□□ 0.67
MSX2-201ENST00000239243 NCR3LG1Q68D85 454 aa19.23■□□□□ 0.67
MSX2-201ENST00000239243 OR10A7Q8NGE5 316 aa19.23■□□□□ 0.67
MSX2-201ENST00000239243 LYPD6BQ8NI32 183 aa19.23■□□□□ 0.67
MSX2-201ENST00000239243 SH3BGRL3Q9H299 93 aa19.23■□□□□ 0.67
MSX2-201ENST00000239243 GAL3ST2Q9H3Q3 398 aa19.23■□□□□ 0.67
MSX2-201ENST00000239243 CACFD1Q9UGQ2 172 aa19.23■□□□□ 0.67
MSX2-201ENST00000239243 MARCH11A6NNE9 402 aa19.22■□□□□ 0.67
MSX2-201ENST00000239243 UMAD1C9J7I0 102 aa19.22■□□□□ 0.67
MSX2-201ENST00000239243 CAMLGP49069 296 aa19.22■□□□□ 0.67
MSX2-201ENST00000239243 HBG1P69891 147 aa19.22■□□□□ 0.67
MSX2-201ENST00000239243 HBG2P69892 147 aa19.22■□□□□ 0.67
MSX2-201ENST00000239243 CISD1Q9NZ45 108 aaKnown RBP19.22■□□□□ 0.67
MSX2-201ENST00000239243 USF3Q68DE3 2245 aa19.22■□□□□ 0.67
MSX2-201ENST00000239243 FAM90A9PA6NNJ1 464 aa19.21■□□□□ 0.67
MSX2-201ENST00000239243 PRH1P02810 166 aa19.21■□□□□ 0.67
MSX2-201ENST00000239243 ATP6V0CP27449 155 aa19.21■□□□□ 0.67
MSX2-201ENST00000239243 R3HDM4Q96D70 268 aa19.21■□□□□ 0.67
MSX2-201ENST00000239243 FCGR3BO75015 233 aa19.21■□□□□ 0.67
MSX2-201ENST00000239243 TMEM267Q0VDI3 215 aaPredicted RBP19.21■□□□□ 0.67
MSX2-201ENST00000239243 S1PR3Q99500 378 aa19.21■□□□□ 0.67
MSX2-201ENST00000239243 TSNAXQ99598 290 aaKnown RBP19.21■□□□□ 0.67
MSX2-201ENST00000239243 RBKSQ9H477 322 aa19.21■□□□□ 0.67
MSX2-201ENST00000239243 TMEM218A2RU14 115 aa19.2■□□□□ 0.66
MSX2-201ENST00000239243 IFNA5P01569 189 aa19.2■□□□□ 0.66
MSX2-201ENST00000239243 NFYBP25208 207 aa19.2■□□□□ 0.66
MSX2-201ENST00000239243 RPL39P5Q59GN2 51 aa19.2■□□□□ 0.66
MSX2-201ENST00000239243 CT45A1Q5HYN5 189 aa19.2■□□□□ 0.66
MSX2-201ENST00000239243 COMMD1Q8N668 190 aa19.2■□□□□ 0.66
MSX2-201ENST00000239243 OR2G3Q8NGZ4 309 aa19.2■□□□□ 0.66
MSX2-201ENST00000239243 CT45A3Q8NHU0 189 aa19.2■□□□□ 0.66
MSX2-201ENST00000239243 CIB3Q96Q77 187 aaPredicted RBP19.2■□□□□ 0.66
MSX2-201ENST00000239243 RPUSD1Q9UJJ7 312 aaKnown RBP19.2■□□□□ 0.66
MSX2-201ENST00000239243 SLC31A2O15432 143 aa19.19■□□□□ 0.66
MSX2-201ENST00000239243 TSPAN15O95858 294 aa19.19■□□□□ 0.66
MSX2-201ENST00000239243 IGHV3-7P01780 117 aa19.19■□□□□ 0.66
MSX2-201ENST00000239243 APOC3P02656 99 aa19.19■□□□□ 0.66
MSX2-201ENST00000239243 M6PRP20645 277 aa19.19■□□□□ 0.66
MSX2-201ENST00000239243 LRRC10Q5BKY1 277 aa19.19■□□□□ 0.66
MSX2-201ENST00000239243 TMEM182Q6ZP80 229 aaPredicted RBP19.19■□□□□ 0.66
MSX2-201ENST00000239243 ZNF439Q8NDP4 499 aa19.19■□□□□ 0.66
MSX2-201ENST00000239243 ADTRPQ96IZ2 230 aa19.19■□□□□ 0.66
MSX2-201ENST00000239243 IGHV1-69-2A0A0G2JMI3 117 aa19.19■□□□□ 0.66
MSX2-201ENST00000239243 NDUFB3O43676 98 aa19.19■□□□□ 0.66
MSX2-201ENST00000239243 NDUFA2O43678 99 aa19.19■□□□□ 0.66
MSX2-201ENST00000239243 RBMXL2O75526 392 aaKnown RBP19.19■□□□□ 0.66
MSX2-201ENST00000239243 SCO1O75880 301 aa19.19■□□□□ 0.66
MSX2-201ENST00000239243 LINC00205P59089 165 aa19.19■□□□□ 0.66
MSX2-201ENST00000239243 ERVK-16P61578 105 aa19.19■□□□□ 0.66
MSX2-201ENST00000239243 RPL31P62899 125 aaKnown RBP19.19■□□□□ 0.66
MSX2-201ENST00000239243 ZNF616Q08AN1 781 aa19.19■□□□□ 0.66
MSX2-201ENST00000239243 C19orf12Q9NSK7 152 aa19.19■□□□□ 0.66
MSX2-201ENST00000239243 LY86O95711 162 aa19.18■□□□□ 0.66
MSX2-201ENST00000239243 GRNP28799 593 aaKnown RBP19.18■□□□□ 0.66
MSX2-201ENST00000239243 THBS3P49746 956 aa19.18■□□□□ 0.66
MSX2-201ENST00000239243 SPANXN5Q5MJ07 72 aa19.18■□□□□ 0.66
MSX2-201ENST00000239243 SLC25A24Q6NUK1 477 aa19.18■□□□□ 0.66
MSX2-201ENST00000239243 OR4S2Q8NH73 311 aa19.18■□□□□ 0.66
MSX2-201ENST00000239243 TREM1Q9NP99 234 aa19.18■□□□□ 0.66
MSX2-201ENST00000239243 SAA2-SAA4A0A096LPE2 208 aa19.17■□□□□ 0.66
MSX2-201ENST00000239243 TNFRSF13BO14836 293 aaPredicted RBP19.17■□□□□ 0.66
MSX2-201ENST00000239243 METTL15P1P0C7V9 234 aa19.17■□□□□ 0.66
MSX2-201ENST00000239243 SAA2P0DJI9 122 aaPredicted RBP19.17■□□□□ 0.66
MSX2-201ENST00000239243 MUC15Q8N387 334 aa19.17■□□□□ 0.66
MSX2-201ENST00000239243 LEAP2Q969E1 77 aa19.17■□□□□ 0.66
MSX2-201ENST00000239243 KAAG1Q9UBP8 84 aa19.17■□□□□ 0.66
MSX2-201ENST00000239243 PLAUP00749 431 aa19.17■□□□□ 0.66
MSX2-201ENST00000239243 DAOP14920 347 aa19.17■□□□□ 0.66
MSX2-201ENST00000239243 MRPS11P82912 194 aaKnown RBP19.17■□□□□ 0.66
MSX2-201ENST00000239243 DDB2Q92466 427 aa19.17■□□□□ 0.66
MSX2-201ENST00000239243 ZNF714Q96N38 554 aa19.17■□□□□ 0.66
MSX2-201ENST00000239243 NQO2P16083 231 aa19.16■□□□□ 0.66
MSX2-201ENST00000239243 HFEQ30201 348 aa19.16■□□□□ 0.66
MSX2-201ENST00000239243 ZNF672Q499Z4 452 aaPredicted RBP19.16■□□□□ 0.66
MSX2-201ENST00000239243 TMEM14EPQ6UXP3 125 aa19.16■□□□□ 0.66
MSX2-201ENST00000239243 LYG1Q8N1E2 194 aa19.16■□□□□ 0.66
MSX2-201ENST00000239243 LILRB2Q8N423 598 aa19.16■□□□□ 0.66
MSX2-201ENST00000239243 DTD1Q8TEA8 209 aa19.16■□□□□ 0.66
MSX2-201ENST00000239243 AKR1C1Q04828 323 aa19.16■□□□□ 0.66
MSX2-201ENST00000239243 LY6DQ14210 128 aa19.16■□□□□ 0.66
MSX2-201ENST00000239243 AARDQ4LEZ3 155 aa19.16■□□□□ 0.66
MSX2-201ENST00000239243 PRAMEF5Q5TYX0 476 aa19.16■□□□□ 0.66
MSX2-201ENST00000239243 SLC25A48Q6ZT89 311 aaKnown RBP19.16■□□□□ 0.66
MSX2-201ENST00000239243 SCGB1C1Q8TD33 95 aa19.16■□□□□ 0.66
MSX2-201ENST00000239243 RAB39BQ96DA2 213 aa19.16■□□□□ 0.66
MSX2-201ENST00000239243 UQCC1Q9NVA1 299 aa19.16■□□□□ 0.66
MSX2-201ENST00000239243 HEPN1Q6WQI6 88 aa19.15■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms