RNA–Protein interactions for RNA: ENST00000642041.1

PHGDH-234, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 943 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-234ENST00000642041 TAAR5O14804 337 aa14.22□□□□□ -0.13
PHGDH-234ENST00000642041 CYB5R3P00387 301 aaPredicted RBP14.22□□□□□ -0.13
PHGDH-234ENST00000642041 MMP9P14780 707 aa14.22□□□□□ -0.13
PHGDH-234ENST00000642041 PVALBP20472 110 aaPredicted RBP14.22□□□□□ -0.13
PHGDH-234ENST00000642041 KIR2DS2P43631 304 aa14.22□□□□□ -0.13
PHGDH-234ENST00000642041 IAH1Q2TAA2 248 aaPredicted RBP14.22□□□□□ -0.13
PHGDH-234ENST00000642041 LGALSLQ3ZCW2 172 aaPredicted RBP14.22□□□□□ -0.13
PHGDH-234ENST00000642041 MRGPRDQ8TDS7 321 aa14.22□□□□□ -0.13
PHGDH-234ENST00000642041 ADTRPQ96IZ2 230 aa14.22□□□□□ -0.13
PHGDH-234ENST00000642041 CCL28Q9NRJ3 127 aa14.22□□□□□ -0.13
PHGDH-234ENST00000642041 CLN8Q9UBY8 286 aa14.22□□□□□ -0.13
PHGDH-234ENST00000642041 FXYD6-FXYD2A0A087WZ82 144 aa14.21□□□□□ -0.13
PHGDH-234ENST00000642041 KANTRA0A1W2PQU2 76 aa14.21□□□□□ -0.13
PHGDH-234ENST00000642041 C15orf65H3BRN8 121 aa14.21□□□□□ -0.13
PHGDH-234ENST00000642041 SIX6O95475 246 aa14.21□□□□□ -0.13
PHGDH-234ENST00000642041 HOXB5P09067 269 aa14.21□□□□□ -0.13
PHGDH-234ENST00000642041 ZNF16P17020 682 aaPredicted RBP14.21□□□□□ -0.13
PHGDH-234ENST00000642041 EDDM3BP56851 147 aa14.21□□□□□ -0.13
PHGDH-234ENST00000642041 TAGLNQ01995 201 aaKnown RBP14.21□□□□□ -0.13
PHGDH-234ENST00000642041 GNMTQ14749 295 aa14.21□□□□□ -0.13
PHGDH-234ENST00000642041 FAM120AOSQ5T036 256 aa14.21□□□□□ -0.13
PHGDH-234ENST00000642041 DCAF12L2Q5VW00 463 aa14.21□□□□□ -0.13
PHGDH-234ENST00000642041 GGNBP1Q5YKI7 109 aa14.21□□□□□ -0.13
PHGDH-234ENST00000642041 LAMTOR1Q6IAA8 161 aa14.21□□□□□ -0.13
PHGDH-234ENST00000642041 IL17RELQ6ZVW7 336 aa14.21□□□□□ -0.13
PHGDH-234ENST00000642041 SLC51BQ86UW2 128 aa14.21□□□□□ -0.13
PHGDH-234ENST00000642041 DTX2Q86UW9 622 aa14.21□□□□□ -0.13
PHGDH-234ENST00000642041 PRR18Q8N4B5 295 aa14.21□□□□□ -0.13
PHGDH-234ENST00000642041 OR11H4Q8NGC9 324 aa14.21□□□□□ -0.13
PHGDH-234ENST00000642041 CCL17Q92583 94 aa14.21□□□□□ -0.13
PHGDH-234ENST00000642041 RAB1CQ92928 201 aa14.21□□□□□ -0.13
PHGDH-234ENST00000642041 GAFA1Q96PS6 74 aa14.21□□□□□ -0.13
PHGDH-234ENST00000642041 AIFM2Q9BRQ8 373 aa14.21□□□□□ -0.13
PHGDH-234ENST00000642041 GNG12Q9UBI6 72 aa14.21□□□□□ -0.13
PHGDH-234ENST00000642041 SLC25A10Q9UBX3 287 aaPredicted RBP14.21□□□□□ -0.13
PHGDH-234ENST00000642041 TRRAPQ9Y4A5 3859 aa14.2□□□□□ -0.14
PHGDH-234ENST00000642041 A0A1B0GU03 582 aa14.2□□□□□ -0.14
PHGDH-234ENST00000642041 A0A1B0GW55 424 aa14.2□□□□□ -0.14
PHGDH-234ENST00000642041 G3V3Q6 166 aa14.2□□□□□ -0.14
PHGDH-234ENST00000642041 TMPRSS2O15393 492 aa14.2□□□□□ -0.14
PHGDH-234ENST00000642041 TCF21O43680 179 aa14.2□□□□□ -0.14
PHGDH-234ENST00000642041 RP2O75695 350 aa14.2□□□□□ -0.14
PHGDH-234ENST00000642041 SCAF4O95104 1147 aaKnown RBP14.2□□□□□ -0.14
PHGDH-234ENST00000642041 DUX4L2P0CJ85 424 aa14.2□□□□□ -0.14
PHGDH-234ENST00000642041 DUX4L3P0CJ86 424 aa14.2□□□□□ -0.14
PHGDH-234ENST00000642041 DUX4L4P0CJ87 422 aa14.2□□□□□ -0.14
PHGDH-234ENST00000642041 DUX4L5P0CJ88 424 aa14.2□□□□□ -0.14
PHGDH-234ENST00000642041 DUX4L6P0CJ89 424 aa14.2□□□□□ -0.14
PHGDH-234ENST00000642041 DUX4L7P0CJ90 424 aa14.2□□□□□ -0.14
PHGDH-234ENST00000642041 CGB3P0DN86 165 aa14.2□□□□□ -0.14
PHGDH-234ENST00000642041 CGB7P0DN87 165 aa14.2□□□□□ -0.14
PHGDH-234ENST00000642041 IGHV4-31P0DP07 118 aa14.2□□□□□ -0.14
PHGDH-234ENST00000642041 CD80P33681 288 aa14.2□□□□□ -0.14
PHGDH-234ENST00000642041 CEBPDP49716 269 aaPredicted RBP14.2□□□□□ -0.14
PHGDH-234ENST00000642041 AP2S1P53680 142 aaPredicted RBP14.2□□□□□ -0.14
PHGDH-234ENST00000642041 DSCR9P59020 149 aa14.2□□□□□ -0.14
PHGDH-234ENST00000642041 IL15RAQ13261 267 aa14.2□□□□□ -0.14
PHGDH-234ENST00000642041 EDDM3AQ14507 147 aa14.2□□□□□ -0.14
PHGDH-234ENST00000642041 OPCMLQ14982 345 aa14.2□□□□□ -0.14
PHGDH-234ENST00000642041 C2orf68Q2NKX9 166 aa14.2□□□□□ -0.14
PHGDH-234ENST00000642041 ZNRF1Q8ND25 227 aa14.2□□□□□ -0.14
PHGDH-234ENST00000642041 OR13A1Q8NGR1 328 aa14.2□□□□□ -0.14
PHGDH-234ENST00000642041 WDR89Q96FK6 387 aaPredicted RBP14.2□□□□□ -0.14
PHGDH-234ENST00000642041 SEC22AQ96IW7 307 aa14.2□□□□□ -0.14
PHGDH-234ENST00000642041 DUX4Q9UBX2 424 aa14.2□□□□□ -0.14
PHGDH-234ENST00000642041 KCNS2Q9ULS6 477 aa14.2□□□□□ -0.14
PHGDH-234ENST00000642041 TNFSF18Q9UNG2 199 aa14.2□□□□□ -0.14
PHGDH-234ENST00000642041 hCG_1809904A0A1W2PP81 198 aa14.19□□□□□ -0.14
PHGDH-234ENST00000642041 A0A1W2PPE2 198 aa14.19□□□□□ -0.14
PHGDH-234ENST00000642041 A0A1W2PR64 198 aa14.19□□□□□ -0.14
PHGDH-234ENST00000642041 A0A1W2PRV1 198 aa14.19□□□□□ -0.14
PHGDH-234ENST00000642041 E5RGE8 158 aa14.19□□□□□ -0.14
PHGDH-234ENST00000642041 SMLR1H3BR10 107 aa14.19□□□□□ -0.14
PHGDH-234ENST00000642041 HSD17B6O14756 317 aa14.19□□□□□ -0.14
PHGDH-234ENST00000642041 ARPC5O15511 151 aa14.19□□□□□ -0.14
PHGDH-234ENST00000642041 ST8SIA3O43173 380 aa14.19□□□□□ -0.14
PHGDH-234ENST00000642041 OR8U9P0C7N5 309 aa14.19□□□□□ -0.14
PHGDH-234ENST00000642041 DAOP14920 347 aa14.19□□□□□ -0.14
PHGDH-234ENST00000642041 HNF1AP20823 631 aa14.19□□□□□ -0.14
PHGDH-234ENST00000642041 TMEM33P57088 247 aa14.19□□□□□ -0.14
PHGDH-234ENST00000642041 RAB14P61106 215 aa14.19□□□□□ -0.14
PHGDH-234ENST00000642041 TMEM155Q4W5P6 130 aa14.19□□□□□ -0.14
PHGDH-234ENST00000642041 MORN2Q502X0 79 aa14.19□□□□□ -0.14
PHGDH-234ENST00000642041 GPR157Q5UAW9 335 aa14.19□□□□□ -0.14
PHGDH-234ENST00000642041 KCNRGQ8N5I3 272 aa14.19□□□□□ -0.14
PHGDH-234ENST00000642041 FAM71E2Q8N5Q1 922 aa14.19□□□□□ -0.14
PHGDH-234ENST00000642041 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP14.19□□□□□ -0.14
PHGDH-234ENST00000642041 C8orf31Q8N9H6 132 aa14.19□□□□□ -0.14
PHGDH-234ENST00000642041 OR8U1Q8NH10 309 aa14.19□□□□□ -0.14
PHGDH-234ENST00000642041 OR1L1Q8NH94 360 aa14.19□□□□□ -0.14
PHGDH-234ENST00000642041 RRNAD1Q96FB5 475 aaKnown RBP14.19□□□□□ -0.14
PHGDH-234ENST00000642041 C1orf159Q96HA4 380 aa14.19□□□□□ -0.14
PHGDH-234ENST00000642041 CALYQ9NYX4 217 aa14.19□□□□□ -0.14
PHGDH-234ENST00000642041 MIOXQ9UGB7 285 aa14.19□□□□□ -0.14
PHGDH-234ENST00000642041 NSG2Q9Y328 171 aa14.19□□□□□ -0.14
PHGDH-234ENST00000642041 IGHV3OR15-7A0A075B7D8 119 aa14.18□□□□□ -0.14
PHGDH-234ENST00000642041 IGKV1D-13A0A0B4J2D9 117 aa14.18□□□□□ -0.14
PHGDH-234ENST00000642041 TNFRSF13BO14836 293 aaPredicted RBP14.18□□□□□ -0.14
PHGDH-234ENST00000642041 GYPAP02724 150 aa14.18□□□□□ -0.14
PHGDH-234ENST00000642041 IGKV1-13P0DP09 117 aa14.18□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms