RNA–Protein interactions for RNA: ENST00000611068.1

RTN1-209, Transcript of reticulon 1, humanhuman

TSL 5 BASIC

Gene RTN1, Length 2,647 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN1-209ENST00000611068 AMY2BP19961 511 aa13.56□□□□□ -0.24
RTN1-209ENST00000611068 RANP62826 216 aaKnown RBP13.56□□□□□ -0.24
RTN1-209ENST00000611068 EWSR1Q01844 656 aaKnown RBP eCLIP13.56□□□□□ -0.24
RTN1-209ENST00000611068 THRSPQ92748 146 aa13.56□□□□□ -0.24
RTN1-209ENST00000611068 FAM24AA6NFZ4 105 aa13.56□□□□□ -0.24
RTN1-209ENST00000611068 BMI1P35226 326 aa13.56□□□□□ -0.24
RTN1-209ENST00000611068 UBE2G2P60604 165 aa13.56□□□□□ -0.24
RTN1-209ENST00000611068 ACOT6Q3I5F7 207 aaPredicted RBP13.56□□□□□ -0.24
RTN1-209ENST00000611068 ZNF709Q8N972 641 aa13.56□□□□□ -0.24
RTN1-209ENST00000611068 TMEM171Q8WVE6 324 aa13.56□□□□□ -0.24
RTN1-209ENST00000611068 CST9LQ9H4G1 147 aa13.56□□□□□ -0.24
RTN1-209ENST00000611068 LAMTOR2Q9Y2Q5 125 aa13.56□□□□□ -0.24
RTN1-209ENST00000611068 GTF3C1Q12789 2109 aa13.55□□□□□ -0.24
RTN1-209ENST00000611068 H1FOOQ8IZA3 346 aaPredicted RBP13.55□□□□□ -0.24
RTN1-209ENST00000611068 ZNF738Q8NE65 137 aa13.55□□□□□ -0.24
RTN1-209ENST00000611068 OR5D14Q8NGL3 314 aa13.55□□□□□ -0.24
RTN1-209ENST00000611068 OR10G4Q8NGN3 311 aa13.55□□□□□ -0.24
RTN1-209ENST00000611068 TNFRSF14Q92956 283 aa13.55□□□□□ -0.24
RTN1-209ENST00000611068 EMG1Q92979 244 aaKnown RBP13.55□□□□□ -0.24
RTN1-209ENST00000611068 SPTSSAQ969W0 71 aa13.55□□□□□ -0.24
RTN1-209ENST00000611068 ELL3Q9HB65 397 aaPredicted RBP13.55□□□□□ -0.24
RTN1-209ENST00000611068 OR6C3Q9NZP0 311 aa13.55□□□□□ -0.24
RTN1-209ENST00000611068 PIGLQ9Y2B2 252 aa13.55□□□□□ -0.24
RTN1-209ENST00000611068 LYZL2Q7Z4W2 148 aa13.55□□□□□ -0.24
RTN1-209ENST00000611068 SPACA3Q8IXA5 215 aa13.55□□□□□ -0.24
RTN1-209ENST00000611068 FBXL14Q8N1E6 418 aa13.55□□□□□ -0.24
RTN1-209ENST00000611068 TMEM45BQ96B21 275 aa13.55□□□□□ -0.24
RTN1-209ENST00000611068 ZNF665Q9H7R5 613 aa13.55□□□□□ -0.24
RTN1-209ENST00000611068 IGHV2OR16-5A0A0B4J2B6 119 aa13.54□□□□□ -0.24
RTN1-209ENST00000611068 MEGF11A6BM72 1044 aa13.54□□□□□ -0.24
RTN1-209ENST00000611068 CDC34P49427 236 aaPredicted RBP13.54□□□□□ -0.24
RTN1-209ENST00000611068 HINT1P49773 126 aaPredicted RBP13.54□□□□□ -0.24
RTN1-209ENST00000611068 TLE1Q04724 770 aa13.54□□□□□ -0.24
RTN1-209ENST00000611068 RNPS1Q15287 305 aaKnown RBP13.54□□□□□ -0.24
RTN1-209ENST00000611068 PIGTQ969N2 578 aa13.54□□□□□ -0.24
RTN1-209ENST00000611068 RBMXL1Q96E39 390 aaKnown RBP13.54□□□□□ -0.24
RTN1-209ENST00000611068 ABHD17AQ96GS6 310 aa13.54□□□□□ -0.24
RTN1-209ENST00000611068 ZNF430Q9H8G1 570 aaPredicted RBP13.54□□□□□ -0.24
RTN1-209ENST00000611068 IL19Q9UHD0 177 aa13.54□□□□□ -0.24
RTN1-209ENST00000611068 ANAPC10Q9UM13 185 aa13.54□□□□□ -0.24
RTN1-209ENST00000611068 C14orf166Q9Y224 244 aaKnown RBP13.54□□□□□ -0.24
RTN1-209ENST00000611068 NCOR2Q9Y618 2525 aa13.54□□□□□ -0.24
RTN1-209ENST00000611068 A0A1W2PP11 408 aa13.54□□□□□ -0.24
RTN1-209ENST00000611068 DLL1O00548 723 aa13.54□□□□□ -0.24
RTN1-209ENST00000611068 CEACAM4O75871 244 aa13.54□□□□□ -0.24
RTN1-209ENST00000611068 COMPP49747 757 aaPredicted RBP13.54□□□□□ -0.24
RTN1-209ENST00000611068 RIPPLY3P57055 190 aa13.54□□□□□ -0.24
RTN1-209ENST00000611068 OR5T1Q8NG75 326 aa13.54□□□□□ -0.24
RTN1-209ENST00000611068 IGKV1-9A0A0C4DH69 117 aa13.53□□□□□ -0.24
RTN1-209ENST00000611068 C5orf49A4QMS7 147 aa13.53□□□□□ -0.24
RTN1-209ENST00000611068 MAP1LC3B2A6NCE7 125 aa13.53□□□□□ -0.24
RTN1-209ENST00000611068 LYZL6O75951 148 aa13.53□□□□□ -0.24
RTN1-209ENST00000611068 DTYMKP23919 212 aa13.53□□□□□ -0.24
RTN1-209ENST00000611068 OR3A4PP47883 348 aa13.53□□□□□ -0.24
RTN1-209ENST00000611068 FOXF2Q12947 444 aa13.53□□□□□ -0.24
RTN1-209ENST00000611068 BATF2Q8N1L9 274 aa13.53□□□□□ -0.24
RTN1-209ENST00000611068 RPRMLQ8N4K4 120 aa13.53□□□□□ -0.24
RTN1-209ENST00000611068 RBMXL3Q8N7X1 1067 aaKnown RBP13.53□□□□□ -0.24
RTN1-209ENST00000611068 CSNK2A3Q8NEV1 391 aa13.53□□□□□ -0.24
RTN1-209ENST00000611068 GPER1Q99527 375 aa13.53□□□□□ -0.24
RTN1-209ENST00000611068 MAP1LC3BQ9GZQ8 125 aa13.53□□□□□ -0.24
RTN1-209ENST00000611068 ZNF701Q9NV72 531 aaPredicted RBP13.53□□□□□ -0.24
RTN1-209ENST00000611068 TNFSF12O43508 249 aa13.53□□□□□ -0.24
RTN1-209ENST00000611068 CRYGSP22914 178 aa13.53□□□□□ -0.24
RTN1-209ENST00000611068 ZNF93P35789 620 aaPredicted RBP13.53□□□□□ -0.24
RTN1-209ENST00000611068 TMEM50BP56557 158 aa13.53□□□□□ -0.24
RTN1-209ENST00000611068 WFDC8Q8IUA0 241 aa13.53□□□□□ -0.24
RTN1-209ENST00000611068 DYRK2Q92630 601 aa13.53□□□□□ -0.24
RTN1-209ENST00000611068 RPUSD4Q96CM3 377 aaKnown RBP13.53□□□□□ -0.24
RTN1-209ENST00000611068 MAGT1Q9H0U3 335 aa13.53□□□□□ -0.24
RTN1-209ENST00000611068 LPAR5Q9H1C0 372 aa13.53□□□□□ -0.24
RTN1-209ENST00000611068 BANF2Q9H503 90 aa13.53□□□□□ -0.24
RTN1-209ENST00000611068 PTPRQQ9UMZ3 2332 aa13.53□□□□□ -0.24
RTN1-209ENST00000611068 IGSF23A1L1A6 192 aa13.52□□□□□ -0.24
RTN1-209ENST00000611068 H7BYZ3 331 aa13.52□□□□□ -0.24
RTN1-209ENST00000611068 VWA1Q6PCB0 445 aa13.52□□□□□ -0.24
RTN1-209ENST00000611068 TMEM108Q6UXF1 575 aa13.52□□□□□ -0.24
RTN1-209ENST00000611068 DOK3Q7L591 496 aa13.52□□□□□ -0.24
RTN1-209ENST00000611068 C9orf106Q8NAJ2 232 aa13.52□□□□□ -0.24
RTN1-209ENST00000611068 OR5B12Q96R08 314 aa13.52□□□□□ -0.24
RTN1-209ENST00000611068 HSPB9Q9BQS6 159 aa13.52□□□□□ -0.24
RTN1-209ENST00000611068 Q9N2K0 584 aa13.52□□□□□ -0.24
RTN1-209ENST00000611068 RNF114Q9Y508 228 aa13.52□□□□□ -0.24
RTN1-209ENST00000611068 GRIFINA4D1Z8 144 aa13.52□□□□□ -0.25
RTN1-209ENST00000611068 BCL2P10415 239 aa13.52□□□□□ -0.25
RTN1-209ENST00000611068 HIST1H1DP16402 221 aaKnown RBP13.52□□□□□ -0.25
RTN1-209ENST00000611068 SNU13P55769 128 aaKnown RBP13.52□□□□□ -0.25
RTN1-209ENST00000611068 Q6ZN92 141 aa13.52□□□□□ -0.25
RTN1-209ENST00000611068 OR5AS1Q8N127 324 aa13.52□□□□□ -0.25
RTN1-209ENST00000611068 ARHGAP5-AS1Q96IT6 56 aa13.52□□□□□ -0.25
RTN1-209ENST00000611068 MOB1AQ9H8S9 216 aa13.52□□□□□ -0.25
RTN1-209ENST00000611068 MANBALQ9NQG1 85 aa13.52□□□□□ -0.25
RTN1-209ENST00000611068 HSPB7Q9UBY9 170 aa13.52□□□□□ -0.25
RTN1-209ENST00000611068 SLC45A2Q9UMX9 530 aa13.52□□□□□ -0.25
RTN1-209ENST00000611068 ST3GAL6Q9Y274 331 aa13.52□□□□□ -0.25
RTN1-209ENST00000611068 MPIG6BO95866 241 aa13.51□□□□□ -0.25
RTN1-209ENST00000611068 NBEAP1P0C6P0 100 aa13.51□□□□□ -0.25
RTN1-209ENST00000611068 OTX1P32242 354 aaPredicted RBP13.51□□□□□ -0.25
RTN1-209ENST00000611068 ARFRP1Q13795 201 aa13.51□□□□□ -0.25
RTN1-209ENST00000611068 FBXW12Q6X9E4 464 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms