RNA–Protein interactions for RNA: ENST00000602011.5

SHKBP1-227, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 897 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-227ENST00000602011 PALMDQ9NP74 551 aa13.74□□□□□ -0.21
SHKBP1-227ENST00000602011 STUB1Q9UNE7 303 aa13.74□□□□□ -0.21
SHKBP1-227ENST00000602011 IGHV4OR15-8A0A075B7B6 117 aa13.73□□□□□ -0.21
SHKBP1-227ENST00000602011 A0A087WW49 117 aa13.73□□□□□ -0.21
SHKBP1-227ENST00000602011 PNMA8CA0A1B0GUJ8 204 aa13.73□□□□□ -0.21
SHKBP1-227ENST00000602011 ST8SIA5O15466 376 aa13.73□□□□□ -0.21
SHKBP1-227ENST00000602011 HSPA12AO43301 675 aa13.73□□□□□ -0.21
SHKBP1-227ENST00000602011 EGR2P11161 476 aaPredicted RBP13.73□□□□□ -0.21
SHKBP1-227ENST00000602011 SRMP19623 302 aa13.73□□□□□ -0.21
SHKBP1-227ENST00000602011 HTR2CP28335 458 aa13.73□□□□□ -0.21
SHKBP1-227ENST00000602011 C6orf201Q7Z4U5 140 aa13.73□□□□□ -0.21
SHKBP1-227ENST00000602011 HSF4Q9ULV5 492 aa13.73□□□□□ -0.21
SHKBP1-227ENST00000602011 LYSTQ99698 3801 aa13.72□□□□□ -0.21
SHKBP1-227ENST00000602011 FCN1O00602 326 aa13.72□□□□□ -0.21
SHKBP1-227ENST00000602011 BRI3O95415 125 aa13.72□□□□□ -0.21
SHKBP1-227ENST00000602011 CPEP16870 476 aa13.72□□□□□ -0.21
SHKBP1-227ENST00000602011 CEACAM6P40199 344 aa13.72□□□□□ -0.21
SHKBP1-227ENST00000602011 TPPP2P59282 170 aa13.72□□□□□ -0.21
SHKBP1-227ENST00000602011 NDPQ00604 133 aa13.72□□□□□ -0.21
SHKBP1-227ENST00000602011 PSG5Q15238 335 aa13.72□□□□□ -0.21
SHKBP1-227ENST00000602011 OVCH2Q7RTZ1 564 aa13.72□□□□□ -0.21
SHKBP1-227ENST00000602011 ANKRD13BQ86YJ7 626 aa13.72□□□□□ -0.21
SHKBP1-227ENST00000602011 SGPP2Q8IWX5 399 aa13.72□□□□□ -0.21
SHKBP1-227ENST00000602011 OR6M1Q8NGM8 313 aa13.72□□□□□ -0.21
SHKBP1-227ENST00000602011 ARPC1AQ92747 370 aa13.72□□□□□ -0.21
SHKBP1-227ENST00000602011 ALX4Q9H161 411 aaPredicted RBP13.72□□□□□ -0.21
SHKBP1-227ENST00000602011 METTL1Q9UBP6 276 aaKnown RBP13.72□□□□□ -0.21
SHKBP1-227ENST00000602011 ZNF221Q9UK13 617 aa13.72□□□□□ -0.21
SHKBP1-227ENST00000602011 FBXO7Q9Y3I1 522 aa13.72□□□□□ -0.21
SHKBP1-227ENST00000602011 A3GALT2U3KPV4 340 aa13.72□□□□□ -0.21
SHKBP1-227ENST00000602011 TMEM14DPA8MWL7 114 aa13.71□□□□□ -0.21
SHKBP1-227ENST00000602011 LGALS7P47929 136 aa13.71□□□□□ -0.21
SHKBP1-227ENST00000602011 TAGLNQ01995 201 aaKnown RBP13.71□□□□□ -0.21
SHKBP1-227ENST00000602011 RPL39P5Q59GN2 51 aa13.71□□□□□ -0.21
SHKBP1-227ENST00000602011 LRRTM1Q86UE6 522 aa13.71□□□□□ -0.21
SHKBP1-227ENST00000602011 PDPNQ86YL7 162 aa13.71□□□□□ -0.21
SHKBP1-227ENST00000602011 LFNGQ8NES3 379 aa13.71□□□□□ -0.21
SHKBP1-227ENST00000602011 FBLIM1Q8WUP2 373 aa13.71□□□□□ -0.21
SHKBP1-227ENST00000602011 TM2D3Q9BRN9 247 aa13.71□□□□□ -0.21
SHKBP1-227ENST00000602011 MND1Q9BWT6 205 aa13.71□□□□□ -0.21
SHKBP1-227ENST00000602011 C11orf54Q9H0W9 315 aaPredicted RBP13.71□□□□□ -0.21
SHKBP1-227ENST00000602011 H0Y980 276 aa13.7□□□□□ -0.22
SHKBP1-227ENST00000602011 IGLV1-51P01701 117 aa13.7□□□□□ -0.22
SHKBP1-227ENST00000602011 APOA2P02652 100 aa13.7□□□□□ -0.22
SHKBP1-227ENST00000602011 TRGV3P03979 118 aa13.7□□□□□ -0.22
SHKBP1-227ENST00000602011 SERPINB10P48595 397 aa13.7□□□□□ -0.22
SHKBP1-227ENST00000602011 RPS16P62249 146 aaKnown RBP13.7□□□□□ -0.22
SHKBP1-227ENST00000602011 TATDN3Q17R31 274 aa13.7□□□□□ -0.22
SHKBP1-227ENST00000602011 HSD17B12Q53GQ0 312 aa13.7□□□□□ -0.22
SHKBP1-227ENST00000602011 RBM48Q5RL73 367 aaKnown RBP13.7□□□□□ -0.22
SHKBP1-227ENST00000602011 OR10K2Q6IF99 312 aa13.7□□□□□ -0.22
SHKBP1-227ENST00000602011 AHSA2Q719I0 299 aa13.7□□□□□ -0.22
SHKBP1-227ENST00000602011 C5orf24Q7Z6I8 188 aa13.7□□□□□ -0.22
SHKBP1-227ENST00000602011 FAM89BQ8N5H3 189 aa13.7□□□□□ -0.22
SHKBP1-227ENST00000602011 ZNF436-AS1Q8NC38 126 aaPredicted RBP13.7□□□□□ -0.22
SHKBP1-227ENST00000602011 SETD6Q8TBK2 473 aa13.7□□□□□ -0.22
SHKBP1-227ENST00000602011 ABHD14BQ96IU4 210 aa13.7□□□□□ -0.22
SHKBP1-227ENST00000602011 CENPOQ9BU64 300 aa13.7□□□□□ -0.22
SHKBP1-227ENST00000602011 FKBP14Q9NWM8 211 aa13.7□□□□□ -0.22
SHKBP1-227ENST00000602011 GAB2Q9UQC2 676 aa13.7□□□□□ -0.22
SHKBP1-227ENST00000602011 C13orf42A0A1B0GVH6 325 aa13.69□□□□□ -0.22
SHKBP1-227ENST00000602011 TRIM64CA6NLI5 447 aa13.69□□□□□ -0.22
SHKBP1-227ENST00000602011 AADACP22760 399 aa13.69□□□□□ -0.22
SHKBP1-227ENST00000602011 HLA-DRB3P79483 266 aa13.69□□□□□ -0.22
SHKBP1-227ENST00000602011 QRFPP83859 136 aa13.69□□□□□ -0.22
SHKBP1-227ENST00000602011 FXYD3Q14802 87 aa13.69□□□□□ -0.22
SHKBP1-227ENST00000602011 ZFAND6Q6FIF0 208 aa13.69□□□□□ -0.22
SHKBP1-227ENST00000602011 BPIFB6Q8NFQ5 453 aa13.69□□□□□ -0.22
SHKBP1-227ENST00000602011 MS4A10Q96PG2 267 aa13.69□□□□□ -0.22
SHKBP1-227ENST00000602011 C19orf73Q9NVV2 129 aa13.69□□□□□ -0.22
SHKBP1-227ENST00000602011 STARD9Q9P2P6 4700 aa13.68□□□□□ -0.22
SHKBP1-227ENST00000602011 CA2P00918 260 aa13.68□□□□□ -0.22
SHKBP1-227ENST00000602011 IGHV3-11P01762 117 aa13.68□□□□□ -0.22
SHKBP1-227ENST00000602011 ARSBP15848 533 aa13.68□□□□□ -0.22
SHKBP1-227ENST00000602011 UNC119Q13432 240 aa13.68□□□□□ -0.22
SHKBP1-227ENST00000602011 SPHARQ15513 63 aa13.68□□□□□ -0.22
SHKBP1-227ENST00000602011 TRAM1Q15629 374 aa13.68□□□□□ -0.22
SHKBP1-227ENST00000602011 GLDNQ6ZMI3 551 aaPredicted RBP13.68□□□□□ -0.22
SHKBP1-227ENST00000602011 CEACAM19Q7Z692 300 aa13.68□□□□□ -0.22
SHKBP1-227ENST00000602011 Q8N1Y9 231 aa13.68□□□□□ -0.22
SHKBP1-227ENST00000602011 POC5Q8NA72 575 aa13.68□□□□□ -0.22
SHKBP1-227ENST00000602011 ISOC1Q96CN7 298 aa13.68□□□□□ -0.22
SHKBP1-227ENST00000602011 Q9N2K0 584 aa13.68□□□□□ -0.22
SHKBP1-227ENST00000602011 C12orf4Q9NQ89 552 aa13.68□□□□□ -0.22
SHKBP1-227ENST00000602011 CNIH1O95406 144 aa13.67□□□□□ -0.22
SHKBP1-227ENST00000602011 UCHL1P09936 223 aa13.67□□□□□ -0.22
SHKBP1-227ENST00000602011 IGHV4-30-4P0DP06 118 aa13.67□□□□□ -0.22
SHKBP1-227ENST00000602011 VEGFCP49767 419 aa13.67□□□□□ -0.22
SHKBP1-227ENST00000602011 PSMD7P51665 324 aa13.67□□□□□ -0.22
SHKBP1-227ENST00000602011 KLF5Q13887 457 aaPredicted RBP13.67□□□□□ -0.22
SHKBP1-227ENST00000602011 RCN1Q15293 331 aa13.67□□□□□ -0.22
SHKBP1-227ENST00000602011 LAIR2Q6ISS4 152 aa13.67□□□□□ -0.22
SHKBP1-227ENST00000602011 USMG5Q96IX5 58 aa13.67□□□□□ -0.22
SHKBP1-227ENST00000602011 CLCC1Q96S66 551 aa13.67□□□□□ -0.22
SHKBP1-227ENST00000602011 NICN1Q9BSH3 213 aa13.67□□□□□ -0.22
SHKBP1-227ENST00000602011 FAM103A1Q9BTL3 118 aaKnown RBP13.67□□□□□ -0.22
SHKBP1-227ENST00000602011 LPAR5Q9H1C0 372 aa13.67□□□□□ -0.22
SHKBP1-227ENST00000602011 ZNF355PQ9NSJ1 428 aa13.67□□□□□ -0.22
SHKBP1-227ENST00000602011 SIGLEC8Q9NYZ4 499 aa13.67□□□□□ -0.22
SHKBP1-227ENST00000602011 AK3Q9UIJ7 227 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms