RNA–Protein interactions for RNA: ENST00000600517.1

ARHGEF1-222, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 3

Gene ARHGEF1, Length 428 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-222ENST00000600517 ZNF221Q9UK13 617 aa10.62□□□□□ -0.71
ARHGEF1-222ENST00000600517 A0A0A6YYH2 397 aa10.61□□□□□ -0.71
ARHGEF1-222ENST00000600517 A6NJ64 397 aa10.61□□□□□ -0.71
ARHGEF1-222ENST00000600517 H0YJW9 148 aa10.61□□□□□ -0.71
ARHGEF1-222ENST00000600517 NBR2O15453 112 aa10.61□□□□□ -0.71
ARHGEF1-222ENST00000600517 SSX5O60225 188 aa10.61□□□□□ -0.71
ARHGEF1-222ENST00000600517 OR8U9P0C7N5 309 aa10.61□□□□□ -0.71
ARHGEF1-222ENST00000600517 CNTFRP26992 372 aa10.61□□□□□ -0.71
ARHGEF1-222ENST00000600517 SLC35B1P78383 322 aa10.61□□□□□ -0.71
ARHGEF1-222ENST00000600517 FAM131AQ6UXB0 335 aa10.61□□□□□ -0.71
ARHGEF1-222ENST00000600517 GLDNQ6ZMI3 551 aaPredicted RBP10.61□□□□□ -0.71
ARHGEF1-222ENST00000600517 COMMD1Q8N668 190 aa10.61□□□□□ -0.71
ARHGEF1-222ENST00000600517 ZNF436-AS1Q8NC38 126 aaPredicted RBP10.61□□□□□ -0.71
ARHGEF1-222ENST00000600517 OR8U1Q8NH10 309 aa10.61□□□□□ -0.71
ARHGEF1-222ENST00000600517 RNF5Q99942 180 aa10.61□□□□□ -0.71
ARHGEF1-222ENST00000600517 HSPB9Q9BQS6 159 aa10.61□□□□□ -0.71
ARHGEF1-222ENST00000600517 ST6GALNAC5Q9BVH7 336 aa10.61□□□□□ -0.71
ARHGEF1-222ENST00000600517 GON7Q9BXV9 100 aa10.61□□□□□ -0.71
ARHGEF1-222ENST00000600517 ZNF580Q9UK33 172 aa10.61□□□□□ -0.71
ARHGEF1-222ENST00000600517 SPATA2Q9UM82 520 aa10.61□□□□□ -0.71
ARHGEF1-222ENST00000600517 TRAV18A0A075B6X5 111 aa10.6□□□□□ -0.71
ARHGEF1-222ENST00000600517 A0A1W2PRX2 142 aa10.6□□□□□ -0.71
ARHGEF1-222ENST00000600517 TMEM235A6NFC5 223 aa10.6□□□□□ -0.71
ARHGEF1-222ENST00000600517 RBBP9O75884 186 aa10.6□□□□□ -0.71
ARHGEF1-222ENST00000600517 NDUFA3O95167 84 aa10.6□□□□□ -0.71
ARHGEF1-222ENST00000600517 IGF1P05019 195 aa10.6□□□□□ -0.71
ARHGEF1-222ENST00000600517 TFAP2AP05549 437 aa10.6□□□□□ -0.71
ARHGEF1-222ENST00000600517 CTXN2P0C2S0 81 aa10.6□□□□□ -0.71
ARHGEF1-222ENST00000600517 LSM3P62310 102 aaKnown RBP10.6□□□□□ -0.71
ARHGEF1-222ENST00000600517 C5orf64Q2M2E5 130 aa10.6□□□□□ -0.71
ARHGEF1-222ENST00000600517 LIN54Q6MZP7 749 aa10.6□□□□□ -0.71
ARHGEF1-222ENST00000600517 H1FOOQ8IZA3 346 aaPredicted RBP10.6□□□□□ -0.71
ARHGEF1-222ENST00000600517 DRAXINQ8NBI3 349 aaPredicted RBP10.6□□□□□ -0.71
ARHGEF1-222ENST00000600517 WFDC9Q8NEX5 89 aa10.6□□□□□ -0.71
ARHGEF1-222ENST00000600517 OR13F1Q8NGS4 319 aa10.6□□□□□ -0.71
ARHGEF1-222ENST00000600517 NUDCD2Q8WVJ2 157 aa10.6□□□□□ -0.71
ARHGEF1-222ENST00000600517 GINS4Q9BRT9 223 aa10.6□□□□□ -0.71
ARHGEF1-222ENST00000600517 FUNDC2Q9BWH2 189 aa10.6□□□□□ -0.71
ARHGEF1-222ENST00000600517 ZFP57Q9NU63 452 aa10.6□□□□□ -0.71
ARHGEF1-222ENST00000600517 ZNF107Q9UII5 783 aaPredicted RBP10.6□□□□□ -0.71
ARHGEF1-222ENST00000600517 WASHC3Q9Y3C0 194 aa10.6□□□□□ -0.71
ARHGEF1-222ENST00000600517 H7C2Y5 167 aa10.59□□□□□ -0.71
ARHGEF1-222ENST00000600517 HLA-DRB1P01911 266 aa10.59□□□□□ -0.71
ARHGEF1-222ENST00000600517 LINC00205P59089 165 aa10.59□□□□□ -0.71
ARHGEF1-222ENST00000600517 GNG2P59768 71 aa10.59□□□□□ -0.71
ARHGEF1-222ENST00000600517 DEFA6Q01524 100 aa10.59□□□□□ -0.71
ARHGEF1-222ENST00000600517 TEX38Q6PEX7 206 aa10.59□□□□□ -0.71
ARHGEF1-222ENST00000600517 ZNF383Q8NA42 475 aa10.59□□□□□ -0.71
ARHGEF1-222ENST00000600517 AUNIPQ9H7T9 357 aa10.59□□□□□ -0.71
ARHGEF1-222ENST00000600517 DIABLOQ9NR28 239 aa10.59□□□□□ -0.71
ARHGEF1-222ENST00000600517 SDHAF2Q9NX18 166 aa10.59□□□□□ -0.71
ARHGEF1-222ENST00000600517 M0R1X1 148 aa10.58□□□□□ -0.72
ARHGEF1-222ENST00000600517 RRHO14718 337 aa10.58□□□□□ -0.72
ARHGEF1-222ENST00000600517 CFHR3Q02985 330 aa10.58□□□□□ -0.72
ARHGEF1-222ENST00000600517 CNIH2Q6PI25 160 aa10.58□□□□□ -0.72
ARHGEF1-222ENST00000600517 RNF152Q8N8N0 203 aa10.58□□□□□ -0.72
ARHGEF1-222ENST00000600517 SLC25A46Q96AG3 418 aa10.58□□□□□ -0.72
ARHGEF1-222ENST00000600517 S100A16Q96FQ6 103 aaKnown RBP10.58□□□□□ -0.72
ARHGEF1-222ENST00000600517 OR2D2Q9H210 308 aa10.58□□□□□ -0.72
ARHGEF1-222ENST00000600517 OR51J1Q9H342 316 aa10.58□□□□□ -0.72
ARHGEF1-222ENST00000600517 KIAA1456Q9P272 454 aa10.58□□□□□ -0.72
ARHGEF1-222ENST00000600517 ANXA10Q9UJ72 324 aa10.58□□□□□ -0.72
ARHGEF1-222ENST00000600517 IGHV7-81A0A0B4J1V7 117 aa10.57□□□□□ -0.72
ARHGEF1-222ENST00000600517 XRCC3O43542 346 aa10.57□□□□□ -0.72
ARHGEF1-222ENST00000600517 IGHG4P01861 327 aa10.57□□□□□ -0.72
ARHGEF1-222ENST00000600517 IGKV1-16P04430 117 aa10.57□□□□□ -0.72
ARHGEF1-222ENST00000600517 ELANEP08246 267 aa10.57□□□□□ -0.72
ARHGEF1-222ENST00000600517 SMIM18P0DKX4 95 aa10.57□□□□□ -0.72
ARHGEF1-222ENST00000600517 OR5H8P0DN80 308 aa10.57□□□□□ -0.72
ARHGEF1-222ENST00000600517 PF4V1P10720 104 aa10.57□□□□□ -0.72
ARHGEF1-222ENST00000600517 SLC6A1P30531 599 aa10.57□□□□□ -0.72
ARHGEF1-222ENST00000600517 RPL23AP62750 156 aaKnown RBP10.57□□□□□ -0.72
ARHGEF1-222ENST00000600517 TAGLNQ01995 201 aaKnown RBP10.57□□□□□ -0.72
ARHGEF1-222ENST00000600517 FOXE3Q13461 319 aa10.57□□□□□ -0.72
ARHGEF1-222ENST00000600517 PDPNQ86YL7 162 aa10.57□□□□□ -0.72
ARHGEF1-222ENST00000600517 FLYWCH2Q96CP2 140 aaKnown RBP10.57□□□□□ -0.72
ARHGEF1-222ENST00000600517 KCTD12Q96CX2 325 aaKnown RBP10.57□□□□□ -0.72
ARHGEF1-222ENST00000600517 C5orf30Q96GV9 206 aa10.57□□□□□ -0.72
ARHGEF1-222ENST00000600517 FBXL15Q9H469 300 aa10.57□□□□□ -0.72
ARHGEF1-222ENST00000600517 OR2W1Q9Y3N9 320 aa10.57□□□□□ -0.72
ARHGEF1-222ENST00000600517 RBM7Q9Y580 266 aaKnown RBP10.57□□□□□ -0.72
ARHGEF1-222ENST00000600517 NOTCH3Q9UM47 2321 aa10.57□□□□□ -0.72
ARHGEF1-222ENST00000600517 FCN1O00602 326 aa10.56□□□□□ -0.72
ARHGEF1-222ENST00000600517 HLA-DQB1P01920 261 aa10.56□□□□□ -0.72
ARHGEF1-222ENST00000600517 APOA2P02652 100 aa10.56□□□□□ -0.72
ARHGEF1-222ENST00000600517 VDAC1P21796 283 aa10.56□□□□□ -0.72
ARHGEF1-222ENST00000600517 PPIFP30405 207 aaKnown RBP10.56□□□□□ -0.72
ARHGEF1-222ENST00000600517 VBP1P61758 197 aa10.56□□□□□ -0.72
ARHGEF1-222ENST00000600517 NCS1P62166 190 aa10.56□□□□□ -0.72
ARHGEF1-222ENST00000600517 RPS16P62249 146 aaKnown RBP10.56□□□□□ -0.72
ARHGEF1-222ENST00000600517 CX3CL1P78423 397 aa10.56□□□□□ -0.72
ARHGEF1-222ENST00000600517 PSG5Q15238 335 aa10.56□□□□□ -0.72
ARHGEF1-222ENST00000600517 KHDC1LQ5JSQ8 128 aa10.56□□□□□ -0.72
ARHGEF1-222ENST00000600517 UBE2NLQ5JXB2 153 aa10.56□□□□□ -0.72
ARHGEF1-222ENST00000600517 SAMD5Q5TGI4 173 aa10.56□□□□□ -0.72
ARHGEF1-222ENST00000600517 ZNF660Q6AZW8 331 aaPredicted RBP10.56□□□□□ -0.72
ARHGEF1-222ENST00000600517 HOGA1Q86XE5 327 aa10.56□□□□□ -0.72
ARHGEF1-222ENST00000600517 SAMD12Q8N8I0 201 aa10.56□□□□□ -0.72
ARHGEF1-222ENST00000600517 TSNAXQ99598 290 aaKnown RBP10.56□□□□□ -0.72
ARHGEF1-222ENST00000600517 G3V4G9 280 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms