RNA–Protein interactions for RNA: ENST00000599833.1

SHKBP1-221, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 761 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-221ENST00000599833 OR2T6Q8NHC8 308 aa15.47■□□□□ 0.07
SHKBP1-221ENST00000599833 WNK1Q9H4A3 2382 aa15.47■□□□□ 0.07
SHKBP1-221ENST00000599833 MEIS3P1A6NDR6 274 aa15.46■□□□□ 0.07
SHKBP1-221ENST00000599833 H0YJW9 148 aa15.46■□□□□ 0.07
SHKBP1-221ENST00000599833 IGLV2-14P01704 120 aa15.46■□□□□ 0.07
SHKBP1-221ENST00000599833 OR8U9P0C7N5 309 aa15.46■□□□□ 0.07
SHKBP1-221ENST00000599833 HIST2H2BDQ6DRA6 164 aa15.46■□□□□ 0.07
SHKBP1-221ENST00000599833 GLDNQ6ZMI3 551 aaPredicted RBP15.46■□□□□ 0.07
SHKBP1-221ENST00000599833 KLHDC1Q8N7A1 406 aa15.46■□□□□ 0.07
SHKBP1-221ENST00000599833 ZNF383Q8NA42 475 aa15.46■□□□□ 0.07
SHKBP1-221ENST00000599833 BEST4Q8NFU0 473 aa15.46■□□□□ 0.07
SHKBP1-221ENST00000599833 OR8U1Q8NH10 309 aa15.46■□□□□ 0.07
SHKBP1-221ENST00000599833 AKR1E2Q96JD6 320 aa15.46■□□□□ 0.07
SHKBP1-221ENST00000599833 SLIRPQ9GZT3 109 aaKnown RBP15.46■□□□□ 0.07
SHKBP1-221ENST00000599833 SDHAF2Q9NX18 166 aa15.46■□□□□ 0.07
SHKBP1-221ENST00000599833 CCDC59Q9P031 241 aaKnown RBP15.46■□□□□ 0.07
SHKBP1-221ENST00000599833 MGAM2Q2M2H8 2515 aa15.45■□□□□ 0.06
SHKBP1-221ENST00000599833 IGKV1D-13A0A0B4J2D9 117 aa15.45■□□□□ 0.06
SHKBP1-221ENST00000599833 HAX1O00165 279 aa15.45■□□□□ 0.06
SHKBP1-221ENST00000599833 PLXNB1O43157 2135 aa15.45■□□□□ 0.06
SHKBP1-221ENST00000599833 LPLP06858 475 aa15.45■□□□□ 0.06
SHKBP1-221ENST00000599833 IGKV1-13P0DP09 117 aa15.45■□□□□ 0.06
SHKBP1-221ENST00000599833 NFYAP23511 347 aaPredicted RBP15.45■□□□□ 0.06
SHKBP1-221ENST00000599833 CNTFRP26992 372 aa15.45■□□□□ 0.06
SHKBP1-221ENST00000599833 ZNF436-AS1Q8NC38 126 aaPredicted RBP15.45■□□□□ 0.06
SHKBP1-221ENST00000599833 GPX8Q8TED1 209 aa15.45■□□□□ 0.06
SHKBP1-221ENST00000599833 S1PR3Q99500 378 aa15.45■□□□□ 0.06
SHKBP1-221ENST00000599833 OR2D2Q9H210 308 aa15.45■□□□□ 0.06
SHKBP1-221ENST00000599833 LINC01548A6NM66 108 aa15.44■□□□□ 0.06
SHKBP1-221ENST00000599833 M0QZK8 103 aa15.44■□□□□ 0.06
SHKBP1-221ENST00000599833 CTDSP2O14595 271 aa15.44■□□□□ 0.06
SHKBP1-221ENST00000599833 FCER2P06734 321 aa15.44■□□□□ 0.06
SHKBP1-221ENST00000599833 CTXN2P0C2S0 81 aa15.44■□□□□ 0.06
SHKBP1-221ENST00000599833 EIF4EBP1Q13541 118 aaPredicted RBP15.44■□□□□ 0.06
SHKBP1-221ENST00000599833 FAM131AQ6UXB0 335 aa15.44■□□□□ 0.06
SHKBP1-221ENST00000599833 DRAXINQ8NBI3 349 aaPredicted RBP15.44■□□□□ 0.06
SHKBP1-221ENST00000599833 AP3S1Q92572 193 aa15.44■□□□□ 0.06
SHKBP1-221ENST00000599833 GINS4Q9BRT9 223 aa15.44■□□□□ 0.06
SHKBP1-221ENST00000599833 NXF2Q9GZY0 626 aaKnown RBP15.44■□□□□ 0.06
SHKBP1-221ENST00000599833 ADAM30Q9UKF2 790 aa15.44■□□□□ 0.06
SHKBP1-221ENST00000599833 NDUFA3O95167 84 aa15.43■□□□□ 0.06
SHKBP1-221ENST00000599833 IGHG2P01859 326 aa15.43■□□□□ 0.06
SHKBP1-221ENST00000599833 CBX5P45973 191 aa15.43■□□□□ 0.06
SHKBP1-221ENST00000599833 GPR12P47775 334 aa15.43■□□□□ 0.06
SHKBP1-221ENST00000599833 ACTBP60709 375 aa15.43■□□□□ 0.06
SHKBP1-221ENST00000599833 ZNF660Q6AZW8 331 aaPredicted RBP15.43■□□□□ 0.06
SHKBP1-221ENST00000599833 LYSMD2Q8IV50 215 aa15.43■□□□□ 0.06
SHKBP1-221ENST00000599833 LAX1Q8IWV1 398 aa15.43■□□□□ 0.06
SHKBP1-221ENST00000599833 NPBQ8NG41 125 aa15.43■□□□□ 0.06
SHKBP1-221ENST00000599833 DDB2Q92466 427 aa15.43■□□□□ 0.06
SHKBP1-221ENST00000599833 OR2W1Q9Y3N9 320 aa15.43■□□□□ 0.06
SHKBP1-221ENST00000599833 OR5H14A6NHG9 310 aa15.42■□□□□ 0.06
SHKBP1-221ENST00000599833 IGKV1-16P04430 117 aa15.42■□□□□ 0.06
SHKBP1-221ENST00000599833 VDAC2P45880 294 aaPredicted RBP15.42■□□□□ 0.06
SHKBP1-221ENST00000599833 MZT2AQ6P582 158 aa15.42■□□□□ 0.06
SHKBP1-221ENST00000599833 OR5AP2Q8NGF4 316 aa15.42■□□□□ 0.06
SHKBP1-221ENST00000599833 OR8H1Q8NGG4 311 aa15.42■□□□□ 0.06
SHKBP1-221ENST00000599833 ABHD1Q96SE0 405 aa15.42■□□□□ 0.06
SHKBP1-221ENST00000599833 HSPB9Q9BQS6 159 aa15.42■□□□□ 0.06
SHKBP1-221ENST00000599833 LIN7CQ9NUP9 197 aaKnown RBP15.42■□□□□ 0.06
SHKBP1-221ENST00000599833 ZNF221Q9UK13 617 aa15.42■□□□□ 0.06
SHKBP1-221ENST00000599833 LINC00473A8K010 186 aa15.41■□□□□ 0.06
SHKBP1-221ENST00000599833 M0R1X1 148 aa15.41■□□□□ 0.06
SHKBP1-221ENST00000599833 PRSS3P35030 304 aa15.41■□□□□ 0.06
SHKBP1-221ENST00000599833 TCTEX1D4Q5JR98 221 aa15.41■□□□□ 0.06
SHKBP1-221ENST00000599833 C10orf99Q6UWK7 81 aa15.41■□□□□ 0.06
SHKBP1-221ENST00000599833 ZNF107Q9UII5 783 aaPredicted RBP15.41■□□□□ 0.06
SHKBP1-221ENST00000599833 TET2Q6N021 2002 aaPredicted RBP15.41■□□□□ 0.06
SHKBP1-221ENST00000599833 VSIG10L2P0DP72 767 aa15.4■□□□□ 0.06
SHKBP1-221ENST00000599833 AADACP22760 399 aa15.4■□□□□ 0.06
SHKBP1-221ENST00000599833 DUTP33316 252 aaKnown RBP15.4■□□□□ 0.06
SHKBP1-221ENST00000599833 OVCH2Q7RTZ1 564 aa15.4■□□□□ 0.06
SHKBP1-221ENST00000599833 SNX29P2Q8IUI4 249 aa15.4■□□□□ 0.06
SHKBP1-221ENST00000599833 ZNF645Q8N7E2 425 aa15.4■□□□□ 0.06
SHKBP1-221ENST00000599833 SCPEP1Q9HB40 452 aa15.4■□□□□ 0.06
SHKBP1-221ENST00000599833 EXTL2Q9UBQ6 330 aa15.4■□□□□ 0.06
SHKBP1-221ENST00000599833 MRPS7Q9Y2R9 242 aaKnown RBP15.4■□□□□ 0.06
SHKBP1-221ENST00000599833 WASHC3Q9Y3C0 194 aa15.4■□□□□ 0.06
SHKBP1-221ENST00000599833 NCBP2LA6PVI3 153 aaKnown RBP15.39■□□□□ 0.05
SHKBP1-221ENST00000599833 ADARB2-AS1A8MUL3 147 aa15.39■□□□□ 0.05
SHKBP1-221ENST00000599833 TPPPO94811 219 aa15.39■□□□□ 0.05
SHKBP1-221ENST00000599833 CD28P10747 220 aa15.39■□□□□ 0.05
SHKBP1-221ENST00000599833 MC5RP33032 325 aa15.39■□□□□ 0.05
SHKBP1-221ENST00000599833 SOX6P35712 828 aa15.39■□□□□ 0.05
SHKBP1-221ENST00000599833 ARPC4P59998 168 aa15.39■□□□□ 0.05
SHKBP1-221ENST00000599833 NECAP2Q9NVZ3 263 aa15.39■□□□□ 0.05
SHKBP1-221ENST00000599833 FAM25AB3EWG3 89 aa15.38■□□□□ 0.05
SHKBP1-221ENST00000599833 FAM25CB3EWG5 89 aa15.38■□□□□ 0.05
SHKBP1-221ENST00000599833 FAM25GB3EWG6 89 aa15.38■□□□□ 0.05
SHKBP1-221ENST00000599833 J3QRK9 145 aa15.38■□□□□ 0.05
SHKBP1-221ENST00000599833 ZNF701M0R085 212 aaPredicted RBP15.38■□□□□ 0.05
SHKBP1-221ENST00000599833 SULT1C2O00338 296 aa15.38■□□□□ 0.05
SHKBP1-221ENST00000599833 NBR2O15453 112 aa15.38■□□□□ 0.05
SHKBP1-221ENST00000599833 PPYP01298 95 aa15.38■□□□□ 0.05
SHKBP1-221ENST00000599833 OR5H8P0DN80 308 aa15.38■□□□□ 0.05
SHKBP1-221ENST00000599833 FCGR2CP31995 323 aa15.38■□□□□ 0.05
SHKBP1-221ENST00000599833 LUMP51884 338 aaPredicted RBP15.38■□□□□ 0.05
SHKBP1-221ENST00000599833 BRWD1-AS2P59051 145 aa15.38■□□□□ 0.05
SHKBP1-221ENST00000599833 RPL30P62888 115 aaKnown RBP15.38■□□□□ 0.05
SHKBP1-221ENST00000599833 CDK10Q15131 360 aa15.38■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 79.6 ms