RNA–Protein interactions for RNA: ENST00000565662.5

USB1-211, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 719 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-211ENST00000565662 C22orf42Q6IC83 251 aa13.15□□□□□ -0.3
USB1-211ENST00000565662 ZNF773Q6PK81 442 aa13.15□□□□□ -0.3
USB1-211ENST00000565662 C10orf99Q6UWK7 81 aa13.15□□□□□ -0.3
USB1-211ENST00000565662 FAM131AQ6UXB0 335 aa13.15□□□□□ -0.3
USB1-211ENST00000565662 MRPL41Q8IXM3 137 aaKnown RBP13.15□□□□□ -0.3
USB1-211ENST00000565662 OR5M8Q8NGP6 311 aa13.15□□□□□ -0.3
USB1-211ENST00000565662 MRAPQ8TCY5 172 aa13.15□□□□□ -0.3
USB1-211ENST00000565662 KCTD7Q96MP8 289 aa13.15□□□□□ -0.3
USB1-211ENST00000565662 P2RX4Q99571 388 aa13.15□□□□□ -0.3
USB1-211ENST00000565662 VCX3AQ9NNX9 186 aa13.15□□□□□ -0.3
USB1-211ENST00000565662 NOTCH3Q9UM47 2321 aa13.14□□□□□ -0.31
USB1-211ENST00000565662 SLC22A5O76082 557 aa13.14□□□□□ -0.31
USB1-211ENST00000565662 RRASP10301 218 aa13.14□□□□□ -0.31
USB1-211ENST00000565662 SLC2A2P11168 524 aaPredicted RBP13.14□□□□□ -0.31
USB1-211ENST00000565662 IGLL1P15814 213 aa13.14□□□□□ -0.31
USB1-211ENST00000565662 OR3A3P47888 321 aa13.14□□□□□ -0.31
USB1-211ENST00000565662 ARFRP1Q13795 201 aa13.14□□□□□ -0.31
USB1-211ENST00000565662 KCTD21Q4G0X4 260 aa13.14□□□□□ -0.31
USB1-211ENST00000565662 PLAC9Q5JTB6 97 aa13.14□□□□□ -0.31
USB1-211ENST00000565662 FOXB2Q5VYV0 432 aa13.14□□□□□ -0.31
USB1-211ENST00000565662 FAM53AQ6NSI3 398 aaPredicted RBP13.14□□□□□ -0.31
USB1-211ENST00000565662 C8orf86Q6ZUL3 223 aa13.14□□□□□ -0.31
USB1-211ENST00000565662 ADTRPQ96IZ2 230 aa13.14□□□□□ -0.31
USB1-211ENST00000565662 UBE2E2Q96LR5 201 aa13.14□□□□□ -0.31
USB1-211ENST00000565662 HSPB9Q9BQS6 159 aa13.14□□□□□ -0.31
USB1-211ENST00000565662 C11orf54Q9H0W9 315 aaPredicted RBP13.14□□□□□ -0.31
USB1-211ENST00000565662 RDH8Q9NYR8 311 aa13.14□□□□□ -0.31
USB1-211ENST00000565662 LINC00527Q9UJ94 153 aa13.14□□□□□ -0.31
USB1-211ENST00000565662 TRAV41A0A0B4J266 112 aa13.13□□□□□ -0.31
USB1-211ENST00000565662 CCL24O00175 119 aa13.13□□□□□ -0.31
USB1-211ENST00000565662 RAB27BO00194 218 aa13.13□□□□□ -0.31
USB1-211ENST00000565662 ARPC1BO15143 372 aaKnown RBP13.13□□□□□ -0.31
USB1-211ENST00000565662 RAMP3O60896 148 aa13.13□□□□□ -0.31
USB1-211ENST00000565662 SCTP09683 121 aa13.13□□□□□ -0.31
USB1-211ENST00000565662 CT45A6P0DMU7 189 aa13.13□□□□□ -0.31
USB1-211ENST00000565662 CT45A5P0DMU8 189 aa13.13□□□□□ -0.31
USB1-211ENST00000565662 CT45A7P0DMV0 189 aa13.13□□□□□ -0.31
USB1-211ENST00000565662 RUNX1Q01196 453 aa13.13□□□□□ -0.31
USB1-211ENST00000565662 EGFEM1PQ0D2K5 195 aa13.13□□□□□ -0.31
USB1-211ENST00000565662 HIST2H2BDQ6DRA6 164 aa13.13□□□□□ -0.31
USB1-211ENST00000565662 ETV3LQ6ZN32 361 aa13.13□□□□□ -0.31
USB1-211ENST00000565662 GINS4Q9BRT9 223 aa13.13□□□□□ -0.31
USB1-211ENST00000565662 HDHD3Q9BSH5 251 aaPredicted RBP13.13□□□□□ -0.31
USB1-211ENST00000565662 DCSTAMPQ9H295 470 aa13.13□□□□□ -0.31
USB1-211ENST00000565662 PARP11Q9NR21 331 aa13.13□□□□□ -0.31
USB1-211ENST00000565662 AURKAIP1Q9NWT8 199 aaPredicted RBP13.13□□□□□ -0.31
USB1-211ENST00000565662 TXNL4BQ9NX01 149 aaKnown RBP13.13□□□□□ -0.31
USB1-211ENST00000565662 ETV7Q9Y603 341 aa13.13□□□□□ -0.31
USB1-211ENST00000565662 TRBV6-7A0A0A0MS04 114 aa13.12□□□□□ -0.31
USB1-211ENST00000565662 A0A0A6YYH2 397 aa13.12□□□□□ -0.31
USB1-211ENST00000565662 IGHV7-81A0A0B4J1V7 117 aa13.12□□□□□ -0.31
USB1-211ENST00000565662 A6NJ64 397 aa13.12□□□□□ -0.31
USB1-211ENST00000565662 CREBL2O60519 120 aaPredicted RBP13.12□□□□□ -0.31
USB1-211ENST00000565662 RPLP1P05386 114 aaKnown RBP13.12□□□□□ -0.31
USB1-211ENST00000565662 OR8U8P0C7N1 319 aa13.12□□□□□ -0.31
USB1-211ENST00000565662 LGALS7P47929 136 aa13.12□□□□□ -0.31
USB1-211ENST00000565662 INSL3P51460 131 aa13.12□□□□□ -0.31
USB1-211ENST00000565662 RTL8BQ17RB0 113 aa13.12□□□□□ -0.31
USB1-211ENST00000565662 CROCCP3Q8IVE0 287 aa13.12□□□□□ -0.31
USB1-211ENST00000565662 MYOZ3Q8TDC0 251 aa13.12□□□□□ -0.31
USB1-211ENST00000565662 FLYWCH2Q96CP2 140 aaKnown RBP13.12□□□□□ -0.31
USB1-211ENST00000565662 ABHD14BQ96IU4 210 aa13.12□□□□□ -0.31
USB1-211ENST00000565662 TMEM68Q96MH6 324 aa13.12□□□□□ -0.31
USB1-211ENST00000565662 ATG5Q9H1Y0 275 aa13.12□□□□□ -0.31
USB1-211ENST00000565662 OR1A1Q9P1Q5 309 aa13.12□□□□□ -0.31
USB1-211ENST00000565662 VSIG4Q9Y279 399 aa13.12□□□□□ -0.31
USB1-211ENST00000565662 RBM7Q9Y580 266 aaKnown RBP13.12□□□□□ -0.31
USB1-211ENST00000565662 ATP6V0E1O15342 81 aa13.11□□□□□ -0.31
USB1-211ENST00000565662 PPIFP30405 207 aaKnown RBP13.11□□□□□ -0.31
USB1-211ENST00000565662 OR10A3P58181 314 aa13.11□□□□□ -0.31
USB1-211ENST00000565662 AKIRIN2Q53H80 203 aa13.11□□□□□ -0.31
USB1-211ENST00000565662 RPL39P5Q59GN2 51 aa13.11□□□□□ -0.31
USB1-211ENST00000565662 C9orf66Q5T8R8 295 aa13.11□□□□□ -0.31
USB1-211ENST00000565662 SFXN4Q6P4A7 337 aa13.11□□□□□ -0.31
USB1-211ENST00000565662 Q6ZPA2 131 aa13.11□□□□□ -0.31
USB1-211ENST00000565662 SLA2Q9H6Q3 261 aa13.11□□□□□ -0.31
USB1-211ENST00000565662 FOXA2Q9Y261 457 aaPredicted RBP13.11□□□□□ -0.31
USB1-211ENST00000565662 H3BUA1 57 aa13.1□□□□□ -0.31
USB1-211ENST00000565662 BET1O15155 118 aa13.1□□□□□ -0.31
USB1-211ENST00000565662 IGLV1-40P01703 118 aa13.1□□□□□ -0.31
USB1-211ENST00000565662 GNB3P16520 340 aa13.1□□□□□ -0.31
USB1-211ENST00000565662 ZNF562Q6V9R5 426 aa13.1□□□□□ -0.31
USB1-211ENST00000565662 MINDY2Q8NBR6 621 aa13.1□□□□□ -0.31
USB1-211ENST00000565662 OR2D2Q9H210 308 aa13.1□□□□□ -0.31
USB1-211ENST00000565662 SLC35D1Q9NTN3 355 aa13.1□□□□□ -0.31
USB1-211ENST00000565662 METTL1Q9UBP6 276 aaKnown RBP13.1□□□□□ -0.31
USB1-211ENST00000565662 KCNK7Q9Y2U2 307 aa13.1□□□□□ -0.31
USB1-211ENST00000565662 LINC01548A6NM66 108 aa13.09□□□□□ -0.31
USB1-211ENST00000565662 RPS16P62249 146 aaKnown RBP13.09□□□□□ -0.31
USB1-211ENST00000565662 FHL3Q13643 280 aa13.09□□□□□ -0.31
USB1-211ENST00000565662 HACD4Q5VWC8 232 aa13.09□□□□□ -0.31
USB1-211ENST00000565662 LCNL1Q6ZST4 164 aa13.09□□□□□ -0.31
USB1-211ENST00000565662 ABHD5Q8WTS1 349 aa13.09□□□□□ -0.31
USB1-211ENST00000565662 RAX2Q96IS3 184 aa13.09□□□□□ -0.31
USB1-211ENST00000565662 A0A075B6Q4 140 aa13.08□□□□□ -0.32
USB1-211ENST00000565662 IGKV1-6A0A0C4DH72 117 aa13.08□□□□□ -0.32
USB1-211ENST00000565662 SHISA3A0PJX4 238 aa13.08□□□□□ -0.32
USB1-211ENST00000565662 M0R1X1 148 aa13.08□□□□□ -0.32
USB1-211ENST00000565662 CD36P16671 472 aa13.08□□□□□ -0.32
USB1-211ENST00000565662 GNG2P59768 71 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms