RNA–Protein interactions for RNA: ENST00000544738.5

DDX55-212, Transcript of DEAD-box helicase 55, humanhuman

TSL 5

Gene DDX55, Length 956 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-212ENST00000544738 CT45A6P0DMU7 189 aa12.62□□□□□ -0.39
DDX55-212ENST00000544738 CT45A5P0DMU8 189 aa12.62□□□□□ -0.39
DDX55-212ENST00000544738 CT45A7P0DMV0 189 aa12.62□□□□□ -0.39
DDX55-212ENST00000544738 TMEM50BP56557 158 aa12.62□□□□□ -0.39
DDX55-212ENST00000544738 MRPS15P82914 257 aaKnown RBP12.62□□□□□ -0.39
DDX55-212ENST00000544738 TBCEQ15813 527 aaPredicted RBP12.62□□□□□ -0.39
DDX55-212ENST00000544738 C2orf76Q3KRA6 126 aa12.62□□□□□ -0.39
DDX55-212ENST00000544738 RPL39P5Q59GN2 51 aa12.62□□□□□ -0.39
DDX55-212ENST00000544738 C9orf66Q5T8R8 295 aa12.62□□□□□ -0.39
DDX55-212ENST00000544738 ZNF660Q6AZW8 331 aaPredicted RBP12.62□□□□□ -0.39
DDX55-212ENST00000544738 IZUMO2Q6UXV1 221 aa12.62□□□□□ -0.39
DDX55-212ENST00000544738 ADAMTSL5Q6ZMM2 481 aa12.62□□□□□ -0.39
DDX55-212ENST00000544738 ARHGAP5-AS1Q96IT6 56 aa12.62□□□□□ -0.39
DDX55-212ENST00000544738 HDHD3Q9BSH5 251 aaPredicted RBP12.62□□□□□ -0.39
DDX55-212ENST00000544738 PECRQ9BY49 303 aa12.62□□□□□ -0.39
DDX55-212ENST00000544738 C11orf54Q9H0W9 315 aaPredicted RBP12.62□□□□□ -0.39
DDX55-212ENST00000544738 RAB22AQ9UL26 194 aa12.62□□□□□ -0.39
DDX55-212ENST00000544738 VSIG4Q9Y279 399 aa12.62□□□□□ -0.39
DDX55-212ENST00000544738 WASHC3Q9Y3C0 194 aa12.62□□□□□ -0.39
DDX55-212ENST00000544738 G3V318 75 aa12.61□□□□□ -0.39
DDX55-212ENST00000544738 H7C2Y5 167 aa12.61□□□□□ -0.39
DDX55-212ENST00000544738 RRHO14718 337 aa12.61□□□□□ -0.39
DDX55-212ENST00000544738 PDCD5O14737 125 aa12.61□□□□□ -0.39
DDX55-212ENST00000544738 IGLV1-40P01703 118 aa12.61□□□□□ -0.39
DDX55-212ENST00000544738 GSTP1P09211 210 aaKnown RBP12.61□□□□□ -0.39
DDX55-212ENST00000544738 ECI1P42126 302 aa12.61□□□□□ -0.39
DDX55-212ENST00000544738 MAP2K4P45985 399 aa12.61□□□□□ -0.39
DDX55-212ENST00000544738 CLDN12P56749 244 aa12.61□□□□□ -0.39
DDX55-212ENST00000544738 RUNX1Q01196 453 aa12.61□□□□□ -0.39
DDX55-212ENST00000544738 FHL3Q13643 280 aa12.61□□□□□ -0.39
DDX55-212ENST00000544738 PLGLAQ15195 96 aa12.61□□□□□ -0.39
DDX55-212ENST00000544738 ZNF367Q7RTV3 350 aa12.61□□□□□ -0.39
DDX55-212ENST00000544738 ZNF491Q8N8L2 437 aa12.61□□□□□ -0.39
DDX55-212ENST00000544738 MINDY2Q8NBR6 621 aa12.61□□□□□ -0.39
DDX55-212ENST00000544738 OR11H1Q8NG94 326 aa12.61□□□□□ -0.39
DDX55-212ENST00000544738 OR5AN1Q8NGI8 311 aa12.61□□□□□ -0.39
DDX55-212ENST00000544738 PTX4Q96A99 478 aa12.61□□□□□ -0.39
DDX55-212ENST00000544738 ABHD14BQ96IU4 210 aa12.61□□□□□ -0.39
DDX55-212ENST00000544738 ZNF221Q9UK13 617 aa12.61□□□□□ -0.39
DDX55-212ENST00000544738 TRAV1-2A0A0B4J238 106 aa12.6□□□□□ -0.39
DDX55-212ENST00000544738 TRDCB7Z8K6 153 aa12.6□□□□□ -0.39
DDX55-212ENST00000544738 H0YJW9 148 aa12.6□□□□□ -0.39
DDX55-212ENST00000544738 SCTP09683 121 aa12.6□□□□□ -0.39
DDX55-212ENST00000544738 OR8U8P0C7N1 319 aa12.6□□□□□ -0.39
DDX55-212ENST00000544738 SERPINB10P48595 397 aa12.6□□□□□ -0.39
DDX55-212ENST00000544738 RAB9AP51151 201 aa12.6□□□□□ -0.39
DDX55-212ENST00000544738 LUMP51884 338 aaPredicted RBP12.6□□□□□ -0.39
DDX55-212ENST00000544738 CX3CL1P78423 397 aa12.6□□□□□ -0.39
DDX55-212ENST00000544738 TMEM267Q0VDI3 215 aaPredicted RBP12.6□□□□□ -0.39
DDX55-212ENST00000544738 TCTEX1D1Q8N7M0 179 aa12.6□□□□□ -0.39
DDX55-212ENST00000544738 CNBD2Q96M20 576 aa12.6□□□□□ -0.39
DDX55-212ENST00000544738 PARP12Q9H0J9 701 aaKnown RBP12.6□□□□□ -0.39
DDX55-212ENST00000544738 KLK15Q9H2R5 256 aa12.6□□□□□ -0.39
DDX55-212ENST00000544738 FBXL15Q9H469 300 aa12.6□□□□□ -0.39
DDX55-212ENST00000544738 OR1A1Q9P1Q5 309 aa12.6□□□□□ -0.39
DDX55-212ENST00000544738 RNF150Q9ULK6 438 aa12.6□□□□□ -0.39
DDX55-212ENST00000544738 I3L521 148 aa12.59□□□□□ -0.39
DDX55-212ENST00000544738 LDLRAD4O15165 306 aa12.59□□□□□ -0.39
DDX55-212ENST00000544738 CD3GP09693 182 aa12.59□□□□□ -0.39
DDX55-212ENST00000544738 GADD45AP24522 165 aa12.59□□□□□ -0.39
DDX55-212ENST00000544738 CRIP2P52943 208 aaPredicted RBP12.59□□□□□ -0.39
DDX55-212ENST00000544738 ZNF616Q08AN1 781 aa12.59□□□□□ -0.39
DDX55-212ENST00000544738 KIAA0141Q14154 515 aaPredicted RBP12.59□□□□□ -0.39
DDX55-212ENST00000544738 PLAC9Q5JTB6 97 aa12.59□□□□□ -0.39
DDX55-212ENST00000544738 HES5Q5TA89 166 aa12.59□□□□□ -0.39
DDX55-212ENST00000544738 GLDNQ6ZMI3 551 aaPredicted RBP12.59□□□□□ -0.39
DDX55-212ENST00000544738 SBSPONQ8IVN8 264 aa12.59□□□□□ -0.39
DDX55-212ENST00000544738 OR4A4PQ8NGN8 299 aa12.59□□□□□ -0.39
DDX55-212ENST00000544738 OR1N2Q8NGR9 330 aa12.59□□□□□ -0.39
DDX55-212ENST00000544738 RAB3CQ96E17 227 aa12.59□□□□□ -0.39
DDX55-212ENST00000544738 TMEM272A0A1B0GTI8 110 aa12.58□□□□□ -0.4
DDX55-212ENST00000544738 SEC14L6B5MCN3 397 aa12.58□□□□□ -0.4
DDX55-212ENST00000544738 GALP22466 123 aa12.58□□□□□ -0.4
DDX55-212ENST00000544738 MYL9P24844 172 aa12.58□□□□□ -0.4
DDX55-212ENST00000544738 INSL3P51460 131 aa12.58□□□□□ -0.4
DDX55-212ENST00000544738 SSX1Q16384 188 aa12.58□□□□□ -0.4
DDX55-212ENST00000544738 CD200R1LQ6Q8B3 271 aa12.58□□□□□ -0.4
DDX55-212ENST00000544738 ZNF436-AS1Q8NC38 126 aaPredicted RBP12.58□□□□□ -0.4
DDX55-212ENST00000544738 TSNAXQ99598 290 aaKnown RBP12.58□□□□□ -0.4
DDX55-212ENST00000544738 CENPOQ9BU64 300 aa12.58□□□□□ -0.4
DDX55-212ENST00000544738 NDUFB11Q9NX14 153 aa12.58□□□□□ -0.4
DDX55-212ENST00000544738 RDH8Q9NYR8 311 aa12.58□□□□□ -0.4
DDX55-212ENST00000544738 RAB26Q9ULW5 256 aa12.58□□□□□ -0.4
DDX55-212ENST00000544738 NUBP2Q9Y5Y2 271 aa12.58□□□□□ -0.4
DDX55-212ENST00000544738 A0A1W2PN81 502 aa12.57□□□□□ -0.4
DDX55-212ENST00000544738 IFITM5A6NNB3 132 aa12.57□□□□□ -0.4
DDX55-212ENST00000544738 MRPS14O60783 128 aaKnown RBP12.57□□□□□ -0.4
DDX55-212ENST00000544738 PROP1O75360 226 aa12.57□□□□□ -0.4
DDX55-212ENST00000544738 DIRAS3O95661 229 aa12.57□□□□□ -0.4
DDX55-212ENST00000544738 APOA2P02652 100 aa12.57□□□□□ -0.4
DDX55-212ENST00000544738 TFAP2AP05549 437 aa12.57□□□□□ -0.4
DDX55-212ENST00000544738 CHRNA7P36544 502 aa12.57□□□□□ -0.4
DDX55-212ENST00000544738 ECSCRQ19T08 205 aa12.57□□□□□ -0.4
DDX55-212ENST00000544738 C19orf54Q5BKX5 351 aa12.57□□□□□ -0.4
DDX55-212ENST00000544738 PYHIN1Q6K0P9 492 aa12.57□□□□□ -0.4
DDX55-212ENST00000544738 ZNF562Q6V9R5 426 aa12.57□□□□□ -0.4
DDX55-212ENST00000544738 PDPNQ86YL7 162 aa12.57□□□□□ -0.4
DDX55-212ENST00000544738 OR10R2Q8NGX6 335 aa12.57□□□□□ -0.4
DDX55-212ENST00000544738 ABHD5Q8WTS1 349 aa12.57□□□□□ -0.4
DDX55-212ENST00000544738 TOLLIPQ9H0E2 274 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms