RNA–Protein interactions for RNA: ENST00000544052.6

SCFD1-207, Transcript of sec1 family domain containing 1, humanhuman

TSL 2 BASIC

Gene SCFD1, Length 2,058 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-207ENST00000544052 TMEM14AQ9Y6G1 99 aa2.27□□□□□ -2.05
SCFD1-207ENST00000544052 CUBNO60494 3623 aa2.27□□□□□ -2.05
SCFD1-207ENST00000544052 CR1P17927 2039 aa2.27□□□□□ -2.05
SCFD1-207ENST00000544052 FLNAP21333 2647 aaKnown RBP2.27□□□□□ -2.05
SCFD1-207ENST00000544052 TRAV8-7A0A075B6U6 113 aa2.27□□□□□ -2.05
SCFD1-207ENST00000544052 TRAV17A0A0B4J275 112 aa2.27□□□□□ -2.05
SCFD1-207ENST00000544052 ZNF705GA8MUZ8 300 aaPredicted RBP2.27□□□□□ -2.05
SCFD1-207ENST00000544052 LINC01619G3V211 115 aa2.27□□□□□ -2.05
SCFD1-207ENST00000544052 CHST10O43529 356 aa2.27□□□□□ -2.05
SCFD1-207ENST00000544052 ATP5HO75947 161 aa2.27□□□□□ -2.05
SCFD1-207ENST00000544052 GLSO94925 669 aaPredicted RBP2.27□□□□□ -2.05
SCFD1-207ENST00000544052 GNRHRP30968 328 aa2.27□□□□□ -2.05
SCFD1-207ENST00000544052 RPA3P35244 121 aaPredicted RBP2.27□□□□□ -2.05
SCFD1-207ENST00000544052 HCCSP53701 268 aa2.27□□□□□ -2.05
SCFD1-207ENST00000544052 TAS2R39P59534 338 aa2.27□□□□□ -2.05
SCFD1-207ENST00000544052 KRTAP12-2P59991 146 aa2.27□□□□□ -2.05
SCFD1-207ENST00000544052 MRPS25P82663 173 aaKnown RBP2.27□□□□□ -2.05
SCFD1-207ENST00000544052 REEP5Q00765 189 aa2.27□□□□□ -2.05
SCFD1-207ENST00000544052 IFFO1Q0D2I5 559 aa2.27□□□□□ -2.05
SCFD1-207ENST00000544052 BCL2A1Q16548 175 aa2.27□□□□□ -2.05
SCFD1-207ENST00000544052 ACTL10Q5JWF8 245 aa2.27□□□□□ -2.05
SCFD1-207ENST00000544052 TMEM236Q5W0B7 351 aa2.27□□□□□ -2.05
SCFD1-207ENST00000544052 OPN5Q6U736 354 aa2.27□□□□□ -2.05
SCFD1-207ENST00000544052 DGAT2L6Q6ZPD8 337 aa2.27□□□□□ -2.05
SCFD1-207ENST00000544052 RTL4Q6ZR62 310 aa2.27□□□□□ -2.05
SCFD1-207ENST00000544052 DOLPP1Q86YN1 238 aa2.27□□□□□ -2.05
SCFD1-207ENST00000544052 CA13Q8N1Q1 262 aa2.27□□□□□ -2.05
SCFD1-207ENST00000544052 SLC35F6Q8N357 371 aa2.27□□□□□ -2.05
SCFD1-207ENST00000544052 UBAC2Q8NBM4 344 aa2.27□□□□□ -2.05
SCFD1-207ENST00000544052 PLPP5Q8NEB5 264 aa2.27□□□□□ -2.05
SCFD1-207ENST00000544052 CIRBP-AS1Q8TBR5 109 aa2.27□□□□□ -2.05
SCFD1-207ENST00000544052 RNASEH2CQ8TDP1 164 aaKnown RBP2.27□□□□□ -2.05
SCFD1-207ENST00000544052 KCNS1Q96KK3 526 aa2.27□□□□□ -2.05
SCFD1-207ENST00000544052 PPP1R36Q96LQ0 422 aa2.27□□□□□ -2.05
SCFD1-207ENST00000544052 SYT4Q9H2B2 425 aa2.27□□□□□ -2.05
SCFD1-207ENST00000544052 TRIM45Q9H8W5 580 aaPredicted RBP2.27□□□□□ -2.05
SCFD1-207ENST00000544052 IFT46Q9NQC8 304 aa2.27□□□□□ -2.05
SCFD1-207ENST00000544052 NAV3Q8IVL0 2385 aa2.27□□□□□ -2.05
SCFD1-207ENST00000544052 FREM1Q5H8C1 2179 aa2.27□□□□□ -2.05
SCFD1-207ENST00000544052 YLPM1P49750 1951 aaKnown RBP2.27□□□□□ -2.05
SCFD1-207ENST00000544052 ANKHD1Q8IWZ3 2542 aaKnown RBP2.26□□□□□ -2.05
SCFD1-207ENST00000544052 ABCA2Q9BZC7 2435 aa2.26□□□□□ -2.05
SCFD1-207ENST00000544052 A0A0A6YYD5 115 aa2.26□□□□□ -2.05
SCFD1-207ENST00000544052 TNFRSF11BO00300 401 aa2.26□□□□□ -2.05
SCFD1-207ENST00000544052 SULT1C2O00338 296 aa2.26□□□□□ -2.05
SCFD1-207ENST00000544052 BPY2O14599 106 aa2.26□□□□□ -2.05
SCFD1-207ENST00000544052 RBFOX2O43251 390 aaKnown RBP eCLIP2.26□□□□□ -2.05
SCFD1-207ENST00000544052 ZNF189O75820 626 aaPredicted RBP2.26□□□□□ -2.05
SCFD1-207ENST00000544052 FADS2O95864 444 aaKnown RBP2.26□□□□□ -2.05
SCFD1-207ENST00000544052 TRBV12-3P01733 135 aa2.26□□□□□ -2.05
SCFD1-207ENST00000544052 MLNP12872 115 aa2.26□□□□□ -2.05
SCFD1-207ENST00000544052 IGFBP3P17936 291 aaPredicted RBP2.26□□□□□ -2.05
SCFD1-207ENST00000544052 HLA-DMAP28067 261 aa2.26□□□□□ -2.05
SCFD1-207ENST00000544052 EVI2BP34910 448 aa2.26□□□□□ -2.05
SCFD1-207ENST00000544052 RAB8AP61006 207 aa2.26□□□□□ -2.05
SCFD1-207ENST00000544052 RPL31P62899 125 aaKnown RBP2.26□□□□□ -2.05
SCFD1-207ENST00000544052 DYNC1I2Q13409 638 aaKnown RBP2.26□□□□□ -2.05
SCFD1-207ENST00000544052 EBI3Q14213 229 aa2.26□□□□□ -2.05
SCFD1-207ENST00000544052 DEFB134Q4QY38 66 aa2.26□□□□□ -2.05
SCFD1-207ENST00000544052 CPTPQ5TA50 214 aa2.26□□□□□ -2.05
SCFD1-207ENST00000544052 KHDRBS2Q5VWX1 349 aaKnown RBP2.26□□□□□ -2.05
SCFD1-207ENST00000544052 STEAP4Q687X5 459 aa2.26□□□□□ -2.05
SCFD1-207ENST00000544052 DUPD1Q68J44 220 aa2.26□□□□□ -2.05
SCFD1-207ENST00000544052 NANOGP8Q6NSW7 305 aa2.26□□□□□ -2.05
SCFD1-207ENST00000544052 TMEM256Q8N2U0 113 aa2.26□□□□□ -2.05
SCFD1-207ENST00000544052 UBALD1Q8TB05 177 aa2.26□□□□□ -2.05
SCFD1-207ENST00000544052 NT5CQ8TCD5 201 aa2.26□□□□□ -2.05
SCFD1-207ENST00000544052 DOK4Q8TEW6 326 aa2.26□□□□□ -2.05
SCFD1-207ENST00000544052 TMEM234Q8WY98 164 aa2.26□□□□□ -2.05
SCFD1-207ENST00000544052 OR5P2Q8WZ92 322 aa2.26□□□□□ -2.05
SCFD1-207ENST00000544052 CDS1Q92903 461 aa2.26□□□□□ -2.05
SCFD1-207ENST00000544052 NARS2Q96I59 477 aaKnown RBP2.26□□□□□ -2.05
SCFD1-207ENST00000544052 CAPZA3Q96KX2 299 aa2.26□□□□□ -2.05
SCFD1-207ENST00000544052 RDH12Q96NR8 316 aa2.26□□□□□ -2.05
SCFD1-207ENST00000544052 SLC38A1Q9H2H9 487 aa2.26□□□□□ -2.05
SCFD1-207ENST00000544052 OR51B5Q9H339 312 aa2.26□□□□□ -2.05
SCFD1-207ENST00000544052 PROK2Q9HC23 129 aa2.26□□□□□ -2.05
SCFD1-207ENST00000544052 NKIRAS1Q9NYS0 192 aa2.26□□□□□ -2.05
SCFD1-207ENST00000544052 VAX2Q9UIW0 290 aa2.26□□□□□ -2.05
SCFD1-207ENST00000544052 NAGKQ9UJ70 344 aa2.26□□□□□ -2.05
SCFD1-207ENST00000544052 FAM215AQ9Y5M1 114 aa2.26□□□□□ -2.05
SCFD1-207ENST00000544052 SLC22A7Q9Y694 548 aa2.26□□□□□ -2.05
SCFD1-207ENST00000544052 FN1P02751 2386 aaKnown RBP2.26□□□□□ -2.05
SCFD1-207ENST00000544052 OR5H1A6NKK0 313 aa2.26□□□□□ -2.05
SCFD1-207ENST00000544052 E5RI56 91 aa2.26□□□□□ -2.05
SCFD1-207ENST00000544052 SGCEO43556 437 aa2.26□□□□□ -2.05
SCFD1-207ENST00000544052 CLPSP04118 112 aa2.26□□□□□ -2.05
SCFD1-207ENST00000544052 PSKH1P11801 424 aa2.26□□□□□ -2.05
SCFD1-207ENST00000544052 GALR1P47211 349 aa2.26□□□□□ -2.05
SCFD1-207ENST00000544052 SLC35A1P78382 337 aa2.26□□□□□ -2.05
SCFD1-207ENST00000544052 BNIP2Q12982 314 aa2.26□□□□□ -2.05
SCFD1-207ENST00000544052 TSNQ15631 228 aaKnown RBP2.26□□□□□ -2.05
SCFD1-207ENST00000544052 C6orf99Q4VX62 202 aa2.26□□□□□ -2.05
SCFD1-207ENST00000544052 Q5W150 140 aa2.26□□□□□ -2.05
SCFD1-207ENST00000544052 FAM19A1Q7Z5A9 133 aa2.26□□□□□ -2.05
SCFD1-207ENST00000544052 DRAM1Q8N682 238 aa2.26□□□□□ -2.05
SCFD1-207ENST00000544052 ZFP62Q8NB50 900 aaPredicted RBP2.26□□□□□ -2.05
SCFD1-207ENST00000544052 OR6N2Q8NGY6 317 aa2.26□□□□□ -2.05
SCFD1-207ENST00000544052 MAGOHBQ96A72 148 aaKnown RBP2.26□□□□□ -2.05
SCFD1-207ENST00000544052 LRRC45Q96CN5 670 aa2.26□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 79.2 ms