RNA–Protein interactions for RNA: ENST00000543710.5

VPS13D-211, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 1 (best)

Gene VPS13D, Length 5,676 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-211ENST00000543710 FMC1Q96HJ9 113 aa6.76□□□□□ -1.33
VPS13D-211ENST00000543710 ASCL3Q9NQ33 180 aa6.76□□□□□ -1.33
VPS13D-211ENST00000543710 FBLN5Q9UBX5 448 aa6.76□□□□□ -1.33
VPS13D-211ENST00000543710 A0A1B0GUS0 222 aa6.75□□□□□ -1.33
VPS13D-211ENST00000543710 APOBEC3AP31941 199 aaPredicted RBP6.75□□□□□ -1.33
VPS13D-211ENST00000543710 HIKESHIQ53FT3 197 aa6.75□□□□□ -1.33
VPS13D-211ENST00000543710 SLC35E4Q6ICL7 350 aa6.75□□□□□ -1.33
VPS13D-211ENST00000543710 ZNF547Q8IVP9 402 aa6.75□□□□□ -1.33
VPS13D-211ENST00000543710 ZNF383Q8NA42 475 aa6.75□□□□□ -1.33
VPS13D-211ENST00000543710 GALNT14Q96FL9 552 aa6.75□□□□□ -1.33
VPS13D-211ENST00000543710 RASL10BQ96S79 203 aa6.75□□□□□ -1.33
VPS13D-211ENST00000543710 ZNF430Q9H8G1 570 aaPredicted RBP6.75□□□□□ -1.33
VPS13D-211ENST00000543710 KLF2Q9Y5W3 355 aaPredicted RBP6.75□□□□□ -1.33
VPS13D-211ENST00000543710 A0A1B0GTL3 188 aa6.75□□□□□ -1.33
VPS13D-211ENST00000543710 K7ERU9 68 aa6.75□□□□□ -1.33
VPS13D-211ENST00000543710 OR2A4O95047 310 aa6.75□□□□□ -1.33
VPS13D-211ENST00000543710 FDCSPQ8NFU4 85 aa6.75□□□□□ -1.33
VPS13D-211ENST00000543710 OR2A7Q96R45 310 aa6.75□□□□□ -1.33
VPS13D-211ENST00000543710 TTTY12Q9BZ98 90 aa6.75□□□□□ -1.33
VPS13D-211ENST00000543710 SPTA1P02549 2419 aa6.75□□□□□ -1.33
VPS13D-211ENST00000543710 HYPMO75409 117 aa6.75□□□□□ -1.33
VPS13D-211ENST00000543710 SCO1O75880 301 aa6.75□□□□□ -1.33
VPS13D-211ENST00000543710 CST7O76096 145 aa6.75□□□□□ -1.33
VPS13D-211ENST00000543710 MELTFP08582 738 aa6.75□□□□□ -1.33
VPS13D-211ENST00000543710 CT62P0C5K7 136 aa6.75□□□□□ -1.33
VPS13D-211ENST00000543710 GLIPR1P48060 266 aa6.75□□□□□ -1.33
VPS13D-211ENST00000543710 RPL24P83731 157 aaKnown RBP6.75□□□□□ -1.33
VPS13D-211ENST00000543710 RELQ04864 619 aaPredicted RBP6.75□□□□□ -1.33
VPS13D-211ENST00000543710 NHLRC3Q5JS37 347 aa6.75□□□□□ -1.33
VPS13D-211ENST00000543710 SIRT4Q9Y6E7 314 aaPredicted RBP6.75□□□□□ -1.33
VPS13D-211ENST00000543710 TMEM189A5PLL7 270 aa6.75□□□□□ -1.33
VPS13D-211ENST00000543710 COX6CP09669 75 aa6.75□□□□□ -1.33
VPS13D-211ENST00000543710 FAM106CPP0CH98 169 aa6.75□□□□□ -1.33
VPS13D-211ENST00000543710 LYZP61626 148 aa6.75□□□□□ -1.33
VPS13D-211ENST00000543710 PSG5Q15238 335 aa6.75□□□□□ -1.33
VPS13D-211ENST00000543710 TNXAQ16473 311 aa6.75□□□□□ -1.33
VPS13D-211ENST00000543710 FAM24BQ8N5W8 94 aa6.75□□□□□ -1.33
VPS13D-211ENST00000543710 HIST1H2BAQ96A08 127 aa6.75□□□□□ -1.33
VPS13D-211ENST00000543710 TMEM186Q96B77 213 aa6.75□□□□□ -1.33
VPS13D-211ENST00000543710 PGLYRP3Q96LB9 341 aa6.75□□□□□ -1.33
VPS13D-211ENST00000543710 ZNF714Q96N38 554 aa6.75□□□□□ -1.33
VPS13D-211ENST00000543710 FAM206AQ9NX38 181 aa6.75□□□□□ -1.33
VPS13D-211ENST00000543710 CD160O95971 181 aa6.74□□□□□ -1.33
VPS13D-211ENST00000543710 IGHV4-34P06331 123 aa6.74□□□□□ -1.33
VPS13D-211ENST00000543710 COX7A1P24310 79 aa6.74□□□□□ -1.33
VPS13D-211ENST00000543710 PEBP1P30086 187 aaKnown RBP6.74□□□□□ -1.33
VPS13D-211ENST00000543710 C3AR1Q16581 482 aa6.74□□□□□ -1.33
VPS13D-211ENST00000543710 SLC16A13Q7RTY0 426 aa6.74□□□□□ -1.33
VPS13D-211ENST00000543710 TMEM183AQ8IXX5 376 aa6.74□□□□□ -1.33
VPS13D-211ENST00000543710 ZNF738Q8NE65 137 aa6.74□□□□□ -1.33
VPS13D-211ENST00000543710 ALKBH7Q9BT30 221 aaPredicted RBP6.74□□□□□ -1.33
VPS13D-211ENST00000543710 ZNF552Q9H707 407 aaPredicted RBP6.74□□□□□ -1.33
VPS13D-211ENST00000543710 TMEM74BQ9NUR3 256 aa6.74□□□□□ -1.33
VPS13D-211ENST00000543710 TDRD15B5MCY1 1934 aaKnown RBP6.74□□□□□ -1.33
VPS13D-211ENST00000543710 TMEM250H0YL14 139 aa6.74□□□□□ -1.33
VPS13D-211ENST00000543710 RHBDL1O75783 438 aa6.74□□□□□ -1.33
VPS13D-211ENST00000543710 LYZL6O75951 148 aa6.74□□□□□ -1.33
VPS13D-211ENST00000543710 PTGDSP41222 190 aa6.74□□□□□ -1.33
VPS13D-211ENST00000543710 POLR2GP62487 172 aaKnown RBP eCLIP6.74□□□□□ -1.33
VPS13D-211ENST00000543710 OR4A47Q6IF82 309 aa6.74□□□□□ -1.33
VPS13D-211ENST00000543710 PRR27Q6MZM9 219 aa6.74□□□□□ -1.33
VPS13D-211ENST00000543710 NR2C2APQ86WQ0 139 aa6.74□□□□□ -1.33
VPS13D-211ENST00000543710 C7orf69Q9H7B7 122 aa6.74□□□□□ -1.33
VPS13D-211ENST00000543710 SLC25A22Q9H936 323 aa6.74□□□□□ -1.33
VPS13D-211ENST00000543710 PLXNA1Q9UIW2 1896 aa6.74□□□□□ -1.33
VPS13D-211ENST00000543710 KNTC1P50748 2209 aa6.74□□□□□ -1.33
VPS13D-211ENST00000543710 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP6.74□□□□□ -1.33
VPS13D-211ENST00000543710 IGLV1-36A0A0B4J1U3 117 aa6.74□□□□□ -1.33
VPS13D-211ENST00000543710 A0A1W2PQF6 199 aa6.74□□□□□ -1.33
VPS13D-211ENST00000543710 FOLR2P14207 255 aa6.74□□□□□ -1.33
VPS13D-211ENST00000543710 TSPOP30536 169 aa6.74□□□□□ -1.33
VPS13D-211ENST00000543710 PPP1CCP36873 323 aaKnown RBP6.74□□□□□ -1.33
VPS13D-211ENST00000543710 CMC4P56277 68 aaPredicted RBP6.74□□□□□ -1.33
VPS13D-211ENST00000543710 FAM214BQ7L5A3 538 aa6.74□□□□□ -1.33
VPS13D-211ENST00000543710 GTSCR1Q86UQ5 136 aa6.74□□□□□ -1.33
VPS13D-211ENST00000543710 MMD2Q8IY49 270 aa6.74□□□□□ -1.33
VPS13D-211ENST00000543710 POC1AQ8NBT0 407 aa6.74□□□□□ -1.33
VPS13D-211ENST00000543710 ADAD2Q8NCV1 583 aaKnown RBP6.74□□□□□ -1.33
VPS13D-211ENST00000543710 SPSB4Q96A44 273 aa6.74□□□□□ -1.33
VPS13D-211ENST00000543710 OR2J1Q9GZK6 312 aa6.74□□□□□ -1.33
VPS13D-211ENST00000543710 SPANXA1Q9NS26 97 aa6.74□□□□□ -1.33
VPS13D-211ENST00000543710 KCNE5Q9UJ90 142 aa6.74□□□□□ -1.33
VPS13D-211ENST00000543710 AUP1Q9Y679 476 aa6.74□□□□□ -1.33
VPS13D-211ENST00000543710 BMPR1BO00238 502 aa6.74□□□□□ -1.33
VPS13D-211ENST00000543710 TTRP02766 147 aa6.74□□□□□ -1.33
VPS13D-211ENST00000543710 KIR2DL2P43627 348 aaPredicted RBP6.74□□□□□ -1.33
VPS13D-211ENST00000543710 CDX1P47902 265 aaPredicted RBP6.74□□□□□ -1.33
VPS13D-211ENST00000543710 B2MP61769 119 aa6.74□□□□□ -1.33
VPS13D-211ENST00000543710 FMODQ06828 376 aa6.74□□□□□ -1.33
VPS13D-211ENST00000543710 TGIF2LXQ8IUE1 241 aa6.74□□□□□ -1.33
VPS13D-211ENST00000543710 OR4D11Q8NGI4 311 aa6.74□□□□□ -1.33
VPS13D-211ENST00000543710 PRSS22Q9GZN4 317 aa6.74□□□□□ -1.33
VPS13D-211ENST00000543710 FOXJ2Q9P0K8 574 aa6.74□□□□□ -1.33
VPS13D-211ENST00000543710 IFITM10A6NMD0 228 aa6.74□□□□□ -1.33
VPS13D-211ENST00000543710 TMEM187Q14656 261 aa6.74□□□□□ -1.33
VPS13D-211ENST00000543710 OR2B11Q5JQS5 317 aa6.74□□□□□ -1.33
VPS13D-211ENST00000543710 WDR25Q64LD2 544 aaPredicted RBP6.74□□□□□ -1.33
VPS13D-211ENST00000543710 TCF23Q7RTU1 214 aa6.74□□□□□ -1.33
VPS13D-211ENST00000543710 C9orf40Q8IXQ3 194 aa6.74□□□□□ -1.33
VPS13D-211ENST00000543710 OR1K1Q8NGR3 316 aa6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms