RNA–Protein interactions for RNA: ENST00000542286.5

DDX55-209, Transcript of DEAD-box helicase 55, humanhuman

TSL 2

Gene DDX55, Length 2,767 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-209ENST00000542286 FAM90A14PP0C7W9 464 aa12.46□□□□□ -0.41
DDX55-209ENST00000542286 FAM90A24PP0C7X0 464 aa12.46□□□□□ -0.41
DDX55-209ENST00000542286 PGA5P0DJD9 388 aa12.46□□□□□ -0.41
DDX55-209ENST00000542286 GZMBP10144 247 aa12.46□□□□□ -0.41
DDX55-209ENST00000542286 FGF7P21781 194 aa12.46□□□□□ -0.41
DDX55-209ENST00000542286 JOSD1Q15040 202 aaPredicted RBP12.46□□□□□ -0.41
DDX55-209ENST00000542286 TESK1Q15569 626 aa12.46□□□□□ -0.41
DDX55-209ENST00000542286 DEFB109BQ30KR1 87 aa12.46□□□□□ -0.41
DDX55-209ENST00000542286 OR2G3Q8NGZ4 309 aa12.46□□□□□ -0.41
DDX55-209ENST00000542286 APC2O95996 2303 aa12.46□□□□□ -0.42
DDX55-209ENST00000542286 OR5B21A6NL26 309 aa12.46□□□□□ -0.42
DDX55-209ENST00000542286 J3QT63 122 aa12.46□□□□□ -0.42
DDX55-209ENST00000542286 MLNRO43193 412 aa12.46□□□□□ -0.42
DDX55-209ENST00000542286 F2RP25116 425 aa12.46□□□□□ -0.42
DDX55-209ENST00000542286 UCP1P25874 307 aa12.46□□□□□ -0.42
DDX55-209ENST00000542286 G0S2P27469 103 aa12.46□□□□□ -0.42
DDX55-209ENST00000542286 VAMP2P63027 116 aa12.46□□□□□ -0.42
DDX55-209ENST00000542286 Q6ZR03 302 aa12.46□□□□□ -0.42
DDX55-209ENST00000542286 CMTM1Q8IZ96 169 aa12.46□□□□□ -0.42
DDX55-209ENST00000542286 ZNF295-AS1Q8N0V1 137 aa12.46□□□□□ -0.42
DDX55-209ENST00000542286 ZNF318Q5VUA4 2279 aa12.45□□□□□ -0.42
DDX55-209ENST00000542286 PAX9P55771 341 aa12.45□□□□□ -0.42
DDX55-209ENST00000542286 TLE1Q04724 770 aa12.45□□□□□ -0.42
DDX55-209ENST00000542286 AESQ08117 197 aa12.45□□□□□ -0.42
DDX55-209ENST00000542286 FAM180AQ6UWF9 173 aa12.45□□□□□ -0.42
DDX55-209ENST00000542286 ZNF808Q8N4W9 903 aaPredicted RBP12.45□□□□□ -0.42
DDX55-209ENST00000542286 OR1L1Q8NH94 360 aa12.45□□□□□ -0.42
DDX55-209ENST00000542286 KLF14Q8TD94 323 aaPredicted RBP12.45□□□□□ -0.42
DDX55-209ENST00000542286 NOL4LQ96MY1 436 aaPredicted RBP12.45□□□□□ -0.42
DDX55-209ENST00000542286 DCTN5Q9BTE1 182 aa12.45□□□□□ -0.42
DDX55-209ENST00000542286 WSB1Q9Y6I7 421 aa12.45□□□□□ -0.42
DDX55-209ENST00000542286 IGHV3-13P01766 116 aa12.45□□□□□ -0.42
DDX55-209ENST00000542286 IGHV3-7P01780 117 aa12.45□□□□□ -0.42
DDX55-209ENST00000542286 GABRA6Q16445 453 aa12.45□□□□□ -0.42
DDX55-209ENST00000542286 LTC4SQ16873 150 aa12.45□□□□□ -0.42
DDX55-209ENST00000542286 H1FOOQ8IZA3 346 aaPredicted RBP12.45□□□□□ -0.42
DDX55-209ENST00000542286 RPRMLQ8N4K4 120 aa12.45□□□□□ -0.42
DDX55-209ENST00000542286 NANOS1Q8WY41 292 aaKnown RBP12.45□□□□□ -0.42
DDX55-209ENST00000542286 GMPPAQ96IJ6 420 aaPredicted RBP12.45□□□□□ -0.42
DDX55-209ENST00000542286 RTL8AQ9BWD3 113 aa12.45□□□□□ -0.42
DDX55-209ENST00000542286 OPN3Q9H1Y3 402 aaPredicted RBP12.45□□□□□ -0.42
DDX55-209ENST00000542286 IGHV3-43A0A0B4J1X8 118 aa12.44□□□□□ -0.42
DDX55-209ENST00000542286 EREGO14944 169 aa12.44□□□□□ -0.42
DDX55-209ENST00000542286 SERPINE2P07093 398 aa12.44□□□□□ -0.42
DDX55-209ENST00000542286 IGHV3-43DP0DP04 118 aa12.44□□□□□ -0.42
DDX55-209ENST00000542286 VDAC1P21796 283 aa12.44□□□□□ -0.42
DDX55-209ENST00000542286 KIR2DL2P43627 348 aaPredicted RBP12.44□□□□□ -0.42
DDX55-209ENST00000542286 ICAM4Q14773 271 aa12.44□□□□□ -0.42
DDX55-209ENST00000542286 FAM214BQ7L5A3 538 aa12.44□□□□□ -0.42
DDX55-209ENST00000542286 RFESDQ8TAC1 157 aa12.44□□□□□ -0.42
DDX55-209ENST00000542286 PPP1R14DQ9NXH3 145 aa12.44□□□□□ -0.42
DDX55-209ENST00000542286 KIAA1456Q9P272 454 aa12.44□□□□□ -0.42
DDX55-209ENST00000542286 CLCF1Q9UBD9 225 aa12.44□□□□□ -0.42
DDX55-209ENST00000542286 CACNG5Q9UF02 275 aa12.44□□□□□ -0.42
DDX55-209ENST00000542286 PKDREJQ9NTG1 2253 aa12.44□□□□□ -0.42
DDX55-209ENST00000542286 SCAF4O95104 1147 aaKnown RBP12.44□□□□□ -0.42
DDX55-209ENST00000542286 TNFRSF9Q07011 255 aa12.44□□□□□ -0.42
DDX55-209ENST00000542286 Q6ZS49 121 aa12.44□□□□□ -0.42
DDX55-209ENST00000542286 C1orf87Q8N0U7 546 aa12.44□□□□□ -0.42
DDX55-209ENST00000542286 BEND2Q8NDZ0 799 aa12.44□□□□□ -0.42
DDX55-209ENST00000542286 OR10V1Q8NGI7 309 aa12.44□□□□□ -0.42
DDX55-209ENST00000542286 LYRM2Q9NU23 88 aaPredicted RBP12.44□□□□□ -0.42
DDX55-209ENST00000542286 PITPNC1Q9UKF7 332 aa12.44□□□□□ -0.42
DDX55-209ENST00000542286 POLEQ07864 2286 aa12.43□□□□□ -0.42
DDX55-209ENST00000542286 DEFB108AA8MXU0 73 aa12.43□□□□□ -0.42
DDX55-209ENST00000542286 DVL1O14640 695 aa12.43□□□□□ -0.42
DDX55-209ENST00000542286 BTNL3Q6UXE8 466 aa12.43□□□□□ -0.42
DDX55-209ENST00000542286 SLC35E3Q7Z769 313 aa12.43□□□□□ -0.42
DDX55-209ENST00000542286 OR52L2PQ8NGH6 319 aa12.43□□□□□ -0.42
DDX55-209ENST00000542286 ZNF705GA8MUZ8 300 aaPredicted RBP12.43□□□□□ -0.42
DDX55-209ENST00000542286 RAMP3O60896 148 aa12.43□□□□□ -0.42
DDX55-209ENST00000542286 IGKV1-5P01602 117 aa12.43□□□□□ -0.42
DDX55-209ENST00000542286 MDKP21741 143 aaPredicted RBP12.43□□□□□ -0.42
DDX55-209ENST00000542286 TAAR6Q96RI8 345 aa12.43□□□□□ -0.42
DDX55-209ENST00000542286 ASCL3Q9NQ33 180 aa12.43□□□□□ -0.42
DDX55-209ENST00000542286 RNF115Q9Y4L5 304 aa12.43□□□□□ -0.42
DDX55-209ENST00000542286 TACC2O95359 2948 aa12.43□□□□□ -0.42
DDX55-209ENST00000542286 H0Y980 276 aa12.42□□□□□ -0.42
DDX55-209ENST00000542286 HSPB1P04792 205 aaKnown RBP12.42□□□□□ -0.42
DDX55-209ENST00000542286 OR3A1P47881 315 aa12.42□□□□□ -0.42
DDX55-209ENST00000542286 ID3Q02535 119 aa12.42□□□□□ -0.42
DDX55-209ENST00000542286 ARL16Q0P5N6 197 aa12.42□□□□□ -0.42
DDX55-209ENST00000542286 FAM185AQ8N0U4 392 aa12.42□□□□□ -0.42
DDX55-209ENST00000542286 METTL15P1P0C7V9 234 aa12.42□□□□□ -0.42
DDX55-209ENST00000542286 ERVK11-1P61568 191 aa12.42□□□□□ -0.42
DDX55-209ENST00000542286 SPRNQ5BIV9 151 aa12.42□□□□□ -0.42
DDX55-209ENST00000542286 SPINK9Q5DT21 86 aa12.42□□□□□ -0.42
DDX55-209ENST00000542286 ZNF497Q6ZNH5 498 aa12.42□□□□□ -0.42
DDX55-209ENST00000542286 WDR31Q8NA23 367 aa12.42□□□□□ -0.42
DDX55-209ENST00000542286 C5orf30Q96GV9 206 aa12.42□□□□□ -0.42
DDX55-209ENST00000542286 RCC1LQ96I51 464 aaKnown RBP12.42□□□□□ -0.42
DDX55-209ENST00000542286 RSG1Q9BU20 258 aa12.42□□□□□ -0.42
DDX55-209ENST00000542286 PKIBQ9C010 78 aa12.42□□□□□ -0.42
DDX55-209ENST00000542286 PLEKHF2Q9H8W4 249 aa12.42□□□□□ -0.42
DDX55-209ENST00000542286 LRP5LA4QPB2 252 aa12.41□□□□□ -0.42
DDX55-209ENST00000542286 AMBPP02760 352 aa12.41□□□□□ -0.42
DDX55-209ENST00000542286 ZNF585BQ52M93 769 aa12.41□□□□□ -0.42
DDX55-209ENST00000542286 ZNF880Q6PDB4 577 aa12.41□□□□□ -0.42
DDX55-209ENST00000542286 TMEM183AQ8IXX5 376 aa12.41□□□□□ -0.42
DDX55-209ENST00000542286 MRGPRDQ8TDS7 321 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms