RNA–Protein interactions for RNA: ENST00000540805.5

PROM1-220, Transcript of prominin 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PROM1, Length 3,908 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-220ENST00000540805 OPN1MW3P0DN78 364 aa4.5□□□□□ -1.69
PROM1-220ENST00000540805 ZNF17P17021 662 aa4.5□□□□□ -1.69
PROM1-220ENST00000540805 BRS3P32247 399 aa4.5□□□□□ -1.69
PROM1-220ENST00000540805 PTTG1IPP53801 180 aa4.5□□□□□ -1.69
PROM1-220ENST00000540805 RAB11AP62491 216 aa4.5□□□□□ -1.69
PROM1-220ENST00000540805 GRB2P62993 217 aaKnown RBP4.5□□□□□ -1.69
PROM1-220ENST00000540805 RTP5Q14D33 572 aa4.5□□□□□ -1.69
PROM1-220ENST00000540805 PRAMEF5Q5TYX0 476 aa4.5□□□□□ -1.69
PROM1-220ENST00000540805 PRAMEF6Q5VXH4 476 aa4.5□□□□□ -1.69
PROM1-220ENST00000540805 C9orf40Q8IXQ3 194 aa4.5□□□□□ -1.69
PROM1-220ENST00000540805 OR1P1Q8NH06 330 aa4.5□□□□□ -1.69
PROM1-220ENST00000540805 MSI2Q96DH6 328 aaKnown RBP4.5□□□□□ -1.69
PROM1-220ENST00000540805 LIN37Q96GY3 246 aaPredicted RBP4.5□□□□□ -1.69
PROM1-220ENST00000540805 UCN2Q96RP3 112 aa4.5□□□□□ -1.69
PROM1-220ENST00000540805 ACTR3CQ9C0K3 210 aaPredicted RBP4.5□□□□□ -1.69
PROM1-220ENST00000540805 PLEKHF2Q9H8W4 249 aa4.5□□□□□ -1.69
PROM1-220ENST00000540805 PCSK5Q92824 1860 aa4.49□□□□□ -1.69
PROM1-220ENST00000540805 TRBV24-1A0A075B6N3 115 aa4.49□□□□□ -1.69
PROM1-220ENST00000540805 DEFB108AA8MXU0 73 aa4.49□□□□□ -1.69
PROM1-220ENST00000540805 PROB1E7EW31 1015 aa4.49□□□□□ -1.69
PROM1-220ENST00000540805 FAM87AP0C7U9 286 aa4.49□□□□□ -1.69
PROM1-220ENST00000540805 ARR3P36575 388 aa4.49□□□□□ -1.69
PROM1-220ENST00000540805 GPM6AP51674 278 aa4.49□□□□□ -1.69
PROM1-220ENST00000540805 MRPS34P82930 218 aaKnown RBP4.49□□□□□ -1.69
PROM1-220ENST00000540805 MMDQ15546 238 aa4.49□□□□□ -1.69
PROM1-220ENST00000540805 FBXW9Q5XUX1 488 aa4.49□□□□□ -1.69
PROM1-220ENST00000540805 TMEM108Q6UXF1 575 aa4.49□□□□□ -1.69
PROM1-220ENST00000540805 MOB3BQ86TA1 216 aa4.49□□□□□ -1.69
PROM1-220ENST00000540805 MYPOPQ86VE0 399 aaPredicted RBP4.49□□□□□ -1.69
PROM1-220ENST00000540805 TUSC5Q8IXB3 177 aa4.49□□□□□ -1.69
PROM1-220ENST00000540805 MRPL41Q8IXM3 137 aaKnown RBP4.49□□□□□ -1.69
PROM1-220ENST00000540805 TMEM123Q8N131 208 aa4.49□□□□□ -1.69
PROM1-220ENST00000540805 RBMXL3Q8N7X1 1067 aaKnown RBP4.49□□□□□ -1.69
PROM1-220ENST00000540805 NOXO1Q8NFA2 376 aa4.49□□□□□ -1.69
PROM1-220ENST00000540805 OR10G4Q8NGN3 311 aa4.49□□□□□ -1.69
PROM1-220ENST00000540805 OR4X1Q8NH49 305 aa4.49□□□□□ -1.69
PROM1-220ENST00000540805 R3HDM4Q96D70 268 aa4.49□□□□□ -1.69
PROM1-220ENST00000540805 CABLES2Q9BTV7 478 aa4.49□□□□□ -1.69
PROM1-220ENST00000540805 CHRNA10Q9GZZ6 450 aa4.49□□□□□ -1.69
PROM1-220ENST00000540805 LIME1Q9H400 295 aa4.49□□□□□ -1.69
PROM1-220ENST00000540805 TMEM242Q9NWH2 141 aa4.49□□□□□ -1.69
PROM1-220ENST00000540805 PAM16Q9Y3D7 125 aa4.49□□□□□ -1.69
PROM1-220ENST00000540805 RNF115Q9Y4L5 304 aa4.49□□□□□ -1.69
PROM1-220ENST00000540805 ADAMTS9Q9P2N4 1935 aa4.49□□□□□ -1.69
PROM1-220ENST00000540805 IGKV3-7A0A075B6H7 116 aa4.49□□□□□ -1.69
PROM1-220ENST00000540805 A0A1B0GU03 582 aa4.49□□□□□ -1.69
PROM1-220ENST00000540805 CDS2O95674 445 aa4.49□□□□□ -1.69
PROM1-220ENST00000540805 ONECUT2O95948 504 aa4.49□□□□□ -1.69
PROM1-220ENST00000540805 MT-CO2P00403 227 aa4.49□□□□□ -1.69
PROM1-220ENST00000540805 GCGP01275 180 aa4.49□□□□□ -1.69
PROM1-220ENST00000540805 DTYMKP23919 212 aa4.49□□□□□ -1.69
PROM1-220ENST00000540805 TESK1Q15569 626 aa4.49□□□□□ -1.69
PROM1-220ENST00000540805 DPPA3Q6W0C5 159 aa4.49□□□□□ -1.69
PROM1-220ENST00000540805 OR10A7Q8NGE5 316 aa4.49□□□□□ -1.69
PROM1-220ENST00000540805 OR5C1Q8NGR4 320 aa4.49□□□□□ -1.69
PROM1-220ENST00000540805 AKIRIN1Q9H9L7 192 aaPredicted RBP4.49□□□□□ -1.69
PROM1-220ENST00000540805 GNG13Q9P2W3 67 aa4.49□□□□□ -1.69
PROM1-220ENST00000540805 ONECUT1Q9UBC0 465 aa4.49□□□□□ -1.69
PROM1-220ENST00000540805 GAB2Q9UQC2 676 aa4.49□□□□□ -1.69
PROM1-220ENST00000540805 ST3GAL6Q9Y274 331 aa4.49□□□□□ -1.69
PROM1-220ENST00000540805 POLDIP2Q9Y2S7 368 aa4.49□□□□□ -1.69
PROM1-220ENST00000540805 C19orf67A6NJJ6 358 aa4.49□□□□□ -1.69
PROM1-220ENST00000540805 SSSCA1O60232 199 aa4.49□□□□□ -1.69
PROM1-220ENST00000540805 FGF5P12034 268 aa4.49□□□□□ -1.69
PROM1-220ENST00000540805 ANOS1P23352 680 aa4.49□□□□□ -1.69
PROM1-220ENST00000540805 FKBP2P26885 142 aaKnown RBP4.49□□□□□ -1.69
PROM1-220ENST00000540805 CD82P27701 267 aa4.49□□□□□ -1.69
PROM1-220ENST00000540805 DYNLT3P51808 116 aa4.49□□□□□ -1.69
PROM1-220ENST00000540805 ERVS71-1P61550 626 aa4.49□□□□□ -1.69
PROM1-220ENST00000540805 SRPXP78539 464 aa4.49□□□□□ -1.69
PROM1-220ENST00000540805 RUNX1Q01196 453 aa4.49□□□□□ -1.69
PROM1-220ENST00000540805 FAM90A2PQ658T7 463 aa4.49□□□□□ -1.69
PROM1-220ENST00000540805 TMEM252Q8N6L7 170 aa4.49□□□□□ -1.69
PROM1-220ENST00000540805 OR10V1Q8NGI7 309 aa4.49□□□□□ -1.69
PROM1-220ENST00000540805 TMEM171Q8WVE6 324 aa4.49□□□□□ -1.69
PROM1-220ENST00000540805 DNASE2BQ8WZ79 361 aa4.49□□□□□ -1.69
PROM1-220ENST00000540805 IL22RA2Q969J5 263 aa4.49□□□□□ -1.69
PROM1-220ENST00000540805 Q96M66 194 aa4.49□□□□□ -1.69
PROM1-220ENST00000540805 SCNM1Q9BWG6 230 aa4.49□□□□□ -1.69
PROM1-220ENST00000540805 C11orf1Q9H5F2 150 aa4.49□□□□□ -1.69
PROM1-220ENST00000540805 LYRM2Q9NU23 88 aaPredicted RBP4.49□□□□□ -1.69
PROM1-220ENST00000540805 SSUH2Q9Y2M2 353 aa4.49□□□□□ -1.69
PROM1-220ENST00000540805 USP9YO00507 2555 aaPredicted RBP4.49□□□□□ -1.69
PROM1-220ENST00000540805 SMG1Q96Q15 3661 aaKnown RBP4.49□□□□□ -1.69
PROM1-220ENST00000540805 ANKHD1Q8IWZ3 2542 aaKnown RBP4.48□□□□□ -1.69
PROM1-220ENST00000540805 XKRY2A2RUG3 117 aa4.48□□□□□ -1.69
PROM1-220ENST00000540805 NKX2-6A6NCS4 301 aa4.48□□□□□ -1.69
PROM1-220ENST00000540805 ANKUB1A6NFN9 424 aa4.48□□□□□ -1.69
PROM1-220ENST00000540805 ZNF705FA8MVS1 300 aaPredicted RBP4.48□□□□□ -1.69
PROM1-220ENST00000540805 TRDCB7Z8K6 153 aa4.48□□□□□ -1.69
PROM1-220ENST00000540805 H3BP45 60 aa4.48□□□□□ -1.69
PROM1-220ENST00000540805 MSTNO14793 375 aa4.48□□□□□ -1.69
PROM1-220ENST00000540805 SH2D1BO14796 132 aa4.48□□□□□ -1.69
PROM1-220ENST00000540805 NDUFB8O95169 186 aa4.48□□□□□ -1.69
PROM1-220ENST00000540805 APOA2P02652 100 aa4.48□□□□□ -1.69
PROM1-220ENST00000540805 ZNF705DP0CH99 300 aaPredicted RBP4.48□□□□□ -1.69
PROM1-220ENST00000540805 ZNF705BP0CI00 300 aaPredicted RBP4.48□□□□□ -1.69
PROM1-220ENST00000540805 IL3RAP26951 378 aa4.48□□□□□ -1.69
PROM1-220ENST00000540805 CRIP3Q6Q6R5 217 aa4.48□□□□□ -1.69
PROM1-220ENST00000540805 TMEM256Q8N2U0 113 aa4.48□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms