RNA–Protein interactions for RNA: ENST00000540090.5

LPCAT3-210, Transcript of lysophosphatidylcholine acyltransferase 3, humanhuman

TSL 1 (best)

Gene LPCAT3, Length 974 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT3-210ENST00000540090 UQCC2Q9BRT2 126 aa15.19■□□□□ 0.02
LPCAT3-210ENST00000540090 FAAP24Q9BTP7 215 aa15.19■□□□□ 0.02
LPCAT3-210ENST00000540090 ZNF355PQ9NSJ1 428 aa15.19■□□□□ 0.02
LPCAT3-210ENST00000540090 SIGLEC8Q9NYZ4 499 aa15.19■□□□□ 0.02
LPCAT3-210ENST00000540090 DIMT1Q9UNQ2 313 aaKnown RBP15.19■□□□□ 0.02
LPCAT3-210ENST00000540090 ANKRD34BA5PLL1 514 aa15.18■□□□□ 0.02
LPCAT3-210ENST00000540090 MYL12AP19105 171 aa15.18■□□□□ 0.02
LPCAT3-210ENST00000540090 SYNJ2BPP57105 145 aa15.18■□□□□ 0.02
LPCAT3-210ENST00000540090 FXYD3Q14802 87 aa15.18■□□□□ 0.02
LPCAT3-210ENST00000540090 ZFP1Q6P2D0 407 aa15.18■□□□□ 0.02
LPCAT3-210ENST00000540090 ZNF880Q6PDB4 577 aa15.18■□□□□ 0.02
LPCAT3-210ENST00000540090 SVOPQ8N4V2 548 aa15.18■□□□□ 0.02
LPCAT3-210ENST00000540090 ZFP41Q8N8Y5 198 aa15.18■□□□□ 0.02
LPCAT3-210ENST00000540090 ZNF485Q8NCK3 441 aa15.18■□□□□ 0.02
LPCAT3-210ENST00000540090 OR5T1Q8NG75 326 aa15.18■□□□□ 0.02
LPCAT3-210ENST00000540090 DERL3Q96Q80 235 aa15.18■□□□□ 0.02
LPCAT3-210ENST00000540090 TSNAXQ99598 290 aaKnown RBP15.18■□□□□ 0.02
LPCAT3-210ENST00000540090 C9orf16Q9BUW7 83 aa15.18■□□□□ 0.02
LPCAT3-210ENST00000540090 PARP12Q9H0J9 701 aaKnown RBP15.18■□□□□ 0.02
LPCAT3-210ENST00000540090 HIPK2Q9H2X6 1198 aa15.18■□□□□ 0.02
LPCAT3-210ENST00000540090 EXOSC1Q9Y3B2 195 aaKnown RBP15.18■□□□□ 0.02
LPCAT3-210ENST00000540090 IRGMA1A4Y4 181 aa15.17■□□□□ 0.02
LPCAT3-210ENST00000540090 PROP1O75360 226 aa15.17■□□□□ 0.02
LPCAT3-210ENST00000540090 SPDEFO95238 335 aa15.17■□□□□ 0.02
LPCAT3-210ENST00000540090 CSN3P07498 182 aa15.17■□□□□ 0.02
LPCAT3-210ENST00000540090 LCN12Q6JVE5 192 aa15.17■□□□□ 0.02
LPCAT3-210ENST00000540090 Q8N402 240 aa15.17■□□□□ 0.02
LPCAT3-210ENST00000540090 NKAIN3Q8N8D7 197 aa15.17■□□□□ 0.02
LPCAT3-210ENST00000540090 GRPEL2Q8TAA5 225 aa15.17■□□□□ 0.02
LPCAT3-210ENST00000540090 BRI3O95415 125 aa15.16■□□□□ 0.02
LPCAT3-210ENST00000540090 NAPSAO96009 420 aa15.16■□□□□ 0.02
LPCAT3-210ENST00000540090 IGKV1-16P04430 117 aa15.16■□□□□ 0.02
LPCAT3-210ENST00000540090 CPEP16870 476 aa15.16■□□□□ 0.02
LPCAT3-210ENST00000540090 MECP2P51608 486 aaKnown RBP15.16■□□□□ 0.02
LPCAT3-210ENST00000540090 RPS16P62249 146 aaKnown RBP15.16■□□□□ 0.02
LPCAT3-210ENST00000540090 C6orf201Q7Z4U5 140 aa15.16■□□□□ 0.02
LPCAT3-210ENST00000540090 KRTAP17-1Q9BYP8 105 aa15.16■□□□□ 0.02
LPCAT3-210ENST00000540090 C11orf54Q9H0W9 315 aaPredicted RBP15.16■□□□□ 0.02
LPCAT3-210ENST00000540090 RETNQ9HD89 108 aa15.16■□□□□ 0.02
LPCAT3-210ENST00000540090 IZUMO1RA6ND01 250 aa15.15■□□□□ 0.02
LPCAT3-210ENST00000540090 SSBP2P81877 361 aaPredicted RBP15.15■□□□□ 0.02
LPCAT3-210ENST00000540090 TATDN3Q17R31 274 aa15.15■□□□□ 0.02
LPCAT3-210ENST00000540090 ZNF343Q6P1L6 599 aa15.15■□□□□ 0.02
LPCAT3-210ENST00000540090 DRAXINQ8NBI3 349 aaPredicted RBP15.15■□□□□ 0.02
LPCAT3-210ENST00000540090 TMEM80Q96HE8 168 aa15.15■□□□□ 0.02
LPCAT3-210ENST00000540090 TMEM68Q96MH6 324 aa15.15■□□□□ 0.02
LPCAT3-210ENST00000540090 PEF1Q9UBV8 284 aaKnown RBP15.15■□□□□ 0.02
LPCAT3-210ENST00000540090 ADAM30Q9UKF2 790 aa15.15■□□□□ 0.02
LPCAT3-210ENST00000540090 CEPT1Q9Y6K0 416 aa15.15■□□□□ 0.02
LPCAT3-210ENST00000540090 SHISA3A0PJX4 238 aa15.14■□□□□ 0.01
LPCAT3-210ENST00000540090 UBBP0CG47 229 aa15.14■□□□□ 0.01
LPCAT3-210ENST00000540090 AADACP22760 399 aa15.14■□□□□ 0.01
LPCAT3-210ENST00000540090 CEACAM6P40199 344 aa15.14■□□□□ 0.01
LPCAT3-210ENST00000540090 LINC00205P59089 165 aa15.14■□□□□ 0.01
LPCAT3-210ENST00000540090 RPS27AP62979 156 aaKnown RBP15.14■□□□□ 0.01
LPCAT3-210ENST00000540090 OR10K2Q6IF99 312 aa15.14■□□□□ 0.01
LPCAT3-210ENST00000540090 ZNF383Q8NA42 475 aa15.14■□□□□ 0.01
LPCAT3-210ENST00000540090 EDARADDQ8WWZ3 215 aa15.14■□□□□ 0.01
LPCAT3-210ENST00000540090 SLC25A17O43808 307 aa15.13■□□□□ 0.01
LPCAT3-210ENST00000540090 CNIH1O95406 144 aa15.13■□□□□ 0.01
LPCAT3-210ENST00000540090 TRBV12-3P01733 135 aa15.13■□□□□ 0.01
LPCAT3-210ENST00000540090 HTR2CP28335 458 aa15.13■□□□□ 0.01
LPCAT3-210ENST00000540090 MED21Q13503 144 aa15.13■□□□□ 0.01
LPCAT3-210ENST00000540090 MOB1BQ7L9L4 216 aa15.13■□□□□ 0.01
LPCAT3-210ENST00000540090 PDPNQ86YL7 162 aa15.13■□□□□ 0.01
LPCAT3-210ENST00000540090 PTX4Q96A99 478 aa15.13■□□□□ 0.01
LPCAT3-210ENST00000540090 FAM110AQ9BQ89 295 aa15.13■□□□□ 0.01
LPCAT3-210ENST00000540090 TINAGL1Q9GZM7 467 aaPredicted RBP15.13■□□□□ 0.01
LPCAT3-210ENST00000540090 CHMP1AQ9HD42 196 aaPredicted RBP15.13■□□□□ 0.01
LPCAT3-210ENST00000540090 TRBV6-6A0A0A6YYG2 114 aa15.12■□□□□ 0.01
LPCAT3-210ENST00000540090 PNMA8CA0A1B0GUJ8 204 aa15.12■□□□□ 0.01
LPCAT3-210ENST00000540090 CD1AP06126 327 aa15.12■□□□□ 0.01
LPCAT3-210ENST00000540090 ZBTB25P24278 435 aa15.12■□□□□ 0.01
LPCAT3-210ENST00000540090 TAS2R43P59537 309 aa15.12■□□□□ 0.01
LPCAT3-210ENST00000540090 OR2K2Q8NGT1 345 aa15.12■□□□□ 0.01
LPCAT3-210ENST00000540090 SETD6Q8TBK2 473 aa15.12■□□□□ 0.01
LPCAT3-210ENST00000540090 USMG5Q96IX5 58 aa15.12■□□□□ 0.01
LPCAT3-210ENST00000540090 TM2D1Q9BX74 207 aa15.12■□□□□ 0.01
LPCAT3-210ENST00000540090 RIMS4Q9H426 269 aaPredicted RBP15.12■□□□□ 0.01
LPCAT3-210ENST00000540090 OR1A1Q9P1Q5 309 aa15.12■□□□□ 0.01
LPCAT3-210ENST00000540090 DYNC1I1O14576 645 aa15.11■□□□□ 0.01
LPCAT3-210ENST00000540090 OR2A4O95047 310 aa15.11■□□□□ 0.01
LPCAT3-210ENST00000540090 CRYGBP07316 175 aa15.11■□□□□ 0.01
LPCAT3-210ENST00000540090 PJVKQ0ZLH3 352 aa15.11■□□□□ 0.01
LPCAT3-210ENST00000540090 DYRK1AQ13627 763 aa15.11■□□□□ 0.01
LPCAT3-210ENST00000540090 ZNF555Q8NEP9 628 aa15.11■□□□□ 0.01
LPCAT3-210ENST00000540090 TMEM59Q9BXS4 323 aa15.11■□□□□ 0.01
LPCAT3-210ENST00000540090 PLEKHA3Q9HB20 300 aa15.11■□□□□ 0.01
LPCAT3-210ENST00000540090 IGLV2-23P01705 113 aa15.1■□□□□ 0.01
LPCAT3-210ENST00000540090 CELP19835 753 aa15.1■□□□□ 0.01
LPCAT3-210ENST00000540090 CD81P60033 236 aa15.1■□□□□ 0.01
LPCAT3-210ENST00000540090 RPEL1Q2QD12 228 aa15.1■□□□□ 0.01
LPCAT3-210ENST00000540090 C1orf100Q5SVJ3 147 aa15.1■□□□□ 0.01
LPCAT3-210ENST00000540090 BVESQ8NE79 360 aa15.1■□□□□ 0.01
LPCAT3-210ENST00000540090 KCNG3Q8TAE7 436 aa15.1■□□□□ 0.01
LPCAT3-210ENST00000540090 THRSPQ92748 146 aa15.1■□□□□ 0.01
LPCAT3-210ENST00000540090 NICN1Q9BSH3 213 aa15.1■□□□□ 0.01
LPCAT3-210ENST00000540090 PLEKHJ1Q9NW61 149 aa15.1■□□□□ 0.01
LPCAT3-210ENST00000540090 ZNF221Q9UK13 617 aa15.1■□□□□ 0.01
LPCAT3-210ENST00000540090 RBMY1BA6NDE4 496 aaKnown RBP15.09■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 106.5 ms