RNA–Protein interactions for RNA: ENST00000523636.5

PABPC1-223, Transcript of poly(A) binding protein cytoplasmic 1, human

TSL 5

Gene PABPC1, Length 818 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PABPC1-223	ENST00000523636	TMEM42	Q69YG0	159 aa		4.15	□□□□□ -1.75
PABPC1-223	ENST00000523636	C12orf73	Q69YU5	71 aa		4.15	□□□□□ -1.75
PABPC1-223	ENST00000523636	STEAP1B	Q6NZ63	245 aa		4.15	□□□□□ -1.75
PABPC1-223	ENST00000523636	KCTD18	Q6PI47	426 aa	Predicted RBP	4.15	□□□□□ -1.75
PABPC1-223	ENST00000523636	DHRS11	Q6UWP2	260 aa		4.15	□□□□□ -1.75
PABPC1-223	ENST00000523636		Q6ZRG5	221 aa		4.15	□□□□□ -1.75
PABPC1-223	ENST00000523636	VN1R4	Q7Z5H5	301 aa		4.15	□□□□□ -1.75
PABPC1-223	ENST00000523636	MUC15	Q8N387	334 aa		4.15	□□□□□ -1.75
PABPC1-223	ENST00000523636	MTURN	Q8N3F0	131 aa		4.15	□□□□□ -1.75
PABPC1-223	ENST00000523636	LRRC18	Q8N456	261 aa		4.15	□□□□□ -1.75
PABPC1-223	ENST00000523636	BPIFB2	Q8N4F0	458 aa		4.15	□□□□□ -1.75
PABPC1-223	ENST00000523636	CLDN22	Q8N7P3	220 aa		4.15	□□□□□ -1.75
PABPC1-223	ENST00000523636	TPRX1	Q8N7U7	411 aa		4.15	□□□□□ -1.75
PABPC1-223	ENST00000523636	TCEANC	Q8N8B7	351 aa		4.15	□□□□□ -1.75
PABPC1-223	ENST00000523636	OR52H1	Q8NGJ2	320 aa		4.15	□□□□□ -1.75
PABPC1-223	ENST00000523636	OR51F2	Q8NH61	342 aa		4.15	□□□□□ -1.75
PABPC1-223	ENST00000523636	RNF138	Q8WVD3	245 aa		4.15	□□□□□ -1.75
PABPC1-223	ENST00000523636	RAB8B	Q92930	207 aa		4.15	□□□□□ -1.75
PABPC1-223	ENST00000523636	UCN3	Q969E3	161 aa		4.15	□□□□□ -1.75
PABPC1-223	ENST00000523636	EXOSC8	Q96B26	276 aa	Known RBP	4.15	□□□□□ -1.75
PABPC1-223	ENST00000523636	SFRP2	Q96HF1	295 aa		4.15	□□□□□ -1.75
PABPC1-223	ENST00000523636	PFDN5	Q99471	154 aa		4.15	□□□□□ -1.75
PABPC1-223	ENST00000523636	POLR2J2	Q9GZM3	115 aa	Known RBP	4.15	□□□□□ -1.75
PABPC1-223	ENST00000523636	COMMD4	Q9H0A8	199 aa		4.15	□□□□□ -1.75
PABPC1-223	ENST00000523636	AAMDC	Q9H7C9	122 aa		4.15	□□□□□ -1.75
PABPC1-223	ENST00000523636	AMBN	Q9NP70	447 aa		4.15	□□□□□ -1.75
PABPC1-223	ENST00000523636	EXOSC4	Q9NPD3	245 aa	Known RBP	4.15	□□□□□ -1.75
PABPC1-223	ENST00000523636	TVP23B	Q9NYZ1	205 aa		4.15	□□□□□ -1.75
PABPC1-223	ENST00000523636	OR52A1	Q9UKL2	312 aa		4.15	□□□□□ -1.75
PABPC1-223	ENST00000523636	STUB1	Q9UNE7	303 aa		4.15	□□□□□ -1.75
PABPC1-223	ENST00000523636	TRAPPC4	Q9Y296	219 aa		4.15	□□□□□ -1.75
PABPC1-223	ENST00000523636	EXOSC1	Q9Y3B2	195 aa	Known RBP	4.15	□□□□□ -1.75
PABPC1-223	ENST00000523636	SOX21	Q9Y651	276 aa	Predicted RBP	4.15	□□□□□ -1.75
PABPC1-223	ENST00000523636	CHCHD2	Q9Y6H1	151 aa	Predicted RBP	4.15	□□□□□ -1.75
PABPC1-223	ENST00000523636	DSPP	Q9NZW4	1301 aa		4.15	□□□□□ -1.75
PABPC1-223	ENST00000523636	CLPSL1	A2RUU4	121 aa		4.14	□□□□□ -1.75
PABPC1-223	ENST00000523636	SMIM9	A6NGZ8	99 aa		4.14	□□□□□ -1.75
PABPC1-223	ENST00000523636	ZNF860	A6NHJ4	632 aa		4.14	□□□□□ -1.75
PABPC1-223	ENST00000523636	GJE1	A6NN92	205 aa		4.14	□□□□□ -1.75
PABPC1-223	ENST00000523636	OR11H12	B2RN74	326 aa		4.14	□□□□□ -1.75
PABPC1-223	ENST00000523636	SEC14L6	B5MCN3	397 aa		4.14	□□□□□ -1.75
PABPC1-223	ENST00000523636	TRDC	B7Z8K6	153 aa		4.14	□□□□□ -1.75
PABPC1-223	ENST00000523636	RGS5	O15539	181 aa		4.14	□□□□□ -1.75
PABPC1-223	ENST00000523636	REM1	O75628	298 aa		4.14	□□□□□ -1.75
PABPC1-223	ENST00000523636	PTH	P01270	115 aa		4.14	□□□□□ -1.75
PABPC1-223	ENST00000523636	TYMS	P04818	313 aa		4.14	□□□□□ -1.75
PABPC1-223	ENST00000523636	OR12D1	P0DN82	309 aa		4.14	□□□□□ -1.75
PABPC1-223	ENST00000523636	HIST1H1E	P10412	219 aa	Known RBP	4.14	□□□□□ -1.75
PABPC1-223	ENST00000523636	TNFRSF1B	P20333	461 aa		4.14	□□□□□ -1.75
PABPC1-223	ENST00000523636	PAX6	P26367	422 aa		4.14	□□□□□ -1.75
PABPC1-223	ENST00000523636	PMEL	P40967	661 aa		4.14	□□□□□ -1.75
PABPC1-223	ENST00000523636	LHX2	P50458	406 aa		4.14	□□□□□ -1.75
PABPC1-223	ENST00000523636	TAS2R41	P59536	307 aa		4.14	□□□□□ -1.75
PABPC1-223	ENST00000523636	RGS1	Q08116	209 aa		4.14	□□□□□ -1.75
PABPC1-223	ENST00000523636	PUDP	Q08623	228 aa		4.14	□□□□□ -1.75
PABPC1-223	ENST00000523636	GINS1	Q14691	196 aa		4.14	□□□□□ -1.75
PABPC1-223	ENST00000523636	DEFB121	Q5J5C9	76 aa		4.14	□□□□□ -1.75
PABPC1-223	ENST00000523636	TNFAIP8L2	Q6P589	184 aa	Predicted RBP	4.14	□□□□□ -1.75
PABPC1-223	ENST00000523636		Q6ZT83	130 aa		4.14	□□□□□ -1.75
PABPC1-223	ENST00000523636	OR2L13	Q8N349	312 aa		4.14	□□□□□ -1.75
PABPC1-223	ENST00000523636	EIF4E3	Q8N5X7	224 aa	Known RBP	4.14	□□□□□ -1.75
PABPC1-223	ENST00000523636	IQCF1	Q8N6M8	205 aa		4.14	□□□□□ -1.75
PABPC1-223	ENST00000523636	GDPD1	Q8N9F7	314 aa		4.14	□□□□□ -1.75
PABPC1-223	ENST00000523636	ZSCAN4	Q8NAM6	433 aa	Predicted RBP	4.14	□□□□□ -1.75
PABPC1-223	ENST00000523636	ZNF740	Q8NDX6	193 aa		4.14	□□□□□ -1.75
PABPC1-223	ENST00000523636	OR11H1	Q8NG94	326 aa		4.14	□□□□□ -1.75
PABPC1-223	ENST00000523636	OR4F17	Q8NGA8	305 aa		4.14	□□□□□ -1.75
PABPC1-223	ENST00000523636	OR1S2	Q8NGQ3	325 aa		4.14	□□□□□ -1.75
PABPC1-223	ENST00000523636	OR9A2	Q8NGT5	310 aa		4.14	□□□□□ -1.75
PABPC1-223	ENST00000523636	OR10K1	Q8NGX5	313 aa		4.14	□□□□□ -1.75
PABPC1-223	ENST00000523636	OR11H2	Q8NH07	326 aa		4.14	□□□□□ -1.75
PABPC1-223	ENST00000523636	OR4F5	Q8NH21	305 aa		4.14	□□□□□ -1.75
PABPC1-223	ENST00000523636	OR4K15	Q8NH41	348 aa		4.14	□□□□□ -1.75
PABPC1-223	ENST00000523636	SYNPR	Q8TBG9	265 aa		4.14	□□□□□ -1.75
PABPC1-223	ENST00000523636	RERG	Q96A58	199 aa	Predicted RBP	4.14	□□□□□ -1.75
PABPC1-223	ENST00000523636	TMEM18	Q96B42	140 aa		4.14	□□□□□ -1.75
PABPC1-223	ENST00000523636	SMIM19	Q96E16	107 aa		4.14	□□□□□ -1.75
PABPC1-223	ENST00000523636	ZNF488	Q96MN9	340 aa		4.14	□□□□□ -1.75
PABPC1-223	ENST00000523636	KCTD7	Q96MP8	289 aa		4.14	□□□□□ -1.75
PABPC1-223	ENST00000523636	OR4F4	Q96R69	305 aa		4.14	□□□□□ -1.75
PABPC1-223	ENST00000523636	NIPSNAP3B	Q9BS92	247 aa		4.14	□□□□□ -1.75
PABPC1-223	ENST00000523636	PDCD10	Q9BUL8	212 aa		4.14	□□□□□ -1.75
PABPC1-223	ENST00000523636	OR51E2	Q9H255	320 aa		4.14	□□□□□ -1.75
PABPC1-223	ENST00000523636	OR51I1	Q9H343	314 aa		4.14	□□□□□ -1.75
PABPC1-223	ENST00000523636	GLIPR2	Q9H4G4	154 aa		4.14	□□□□□ -1.75
PABPC1-223	ENST00000523636	PNRC2	Q9NPJ4	139 aa	Known RBP	4.14	□□□□□ -1.75
PABPC1-223	ENST00000523636	ELF5	Q9UKW6	265 aa	Predicted RBP	4.14	□□□□□ -1.75
PABPC1-223	ENST00000523636	BOK	Q9UMX3	212 aa	Predicted RBP	4.14	□□□□□ -1.75
PABPC1-223	ENST00000523636	TRBV4-1	A0A0J9YWV2	114 aa		4.13	□□□□□ -1.75
PABPC1-223	ENST00000523636	TINCR	A0A1B0GVN0	87 aa		4.13	□□□□□ -1.75
PABPC1-223	ENST00000523636	FAM231B	A6NCW3	169 aa		4.13	□□□□□ -1.75
PABPC1-223	ENST00000523636	GAGE12J	A6NER3	117 aa		4.13	□□□□□ -1.75
PABPC1-223	ENST00000523636	LEUTX	A8MZ59	168 aa		4.13	□□□□□ -1.75
PABPC1-223	ENST00000523636	ZNF670-ZNF695	F2Z2N8	137 aa		4.13	□□□□□ -1.75
PABPC1-223	ENST00000523636	TSTD3	H0UI37	97 aa		4.13	□□□□□ -1.75
PABPC1-223	ENST00000523636	ERI3	O43414	337 aa	Known RBP	4.13	□□□□□ -1.75
PABPC1-223	ENST00000523636	SSNA1	O43805	119 aa		4.13	□□□□□ -1.75
PABPC1-223	ENST00000523636	RP2	O75695	350 aa		4.13	□□□□□ -1.75
PABPC1-223	ENST00000523636	TRAPPC6A	O75865	159 aa		4.13	□□□□□ -1.75
PABPC1-223	ENST00000523636	ZFAND5	O76080	213 aa		4.13	□□□□□ -1.75

Retrieved 100 of 20,778 RNA–protein pairs in 78.2 ms