RNA–Protein interactions for RNA: ENST00000508685.1

SH3RF1-203, Transcript of SH3 domain containing ring finger 1, humanhuman

TSL 1 (best)

Gene SH3RF1, Length 2,020 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF1-203ENST00000508685 C5orf24Q7Z6I8 188 aa9.28□□□□□ -0.92
SH3RF1-203ENST00000508685 THNSL2Q86YJ6 484 aa9.28□□□□□ -0.92
SH3RF1-203ENST00000508685 CISD2Q8N5K1 135 aaKnown RBP9.28□□□□□ -0.92
SH3RF1-203ENST00000508685 ERRFI1Q9UJM3 462 aaPredicted RBP9.28□□□□□ -0.92
SH3RF1-203ENST00000508685 MMP24Q9Y5R2 645 aa9.28□□□□□ -0.92
SH3RF1-203ENST00000508685 SPTA1P02549 2419 aa9.28□□□□□ -0.92
SH3RF1-203ENST00000508685 FAM208BQ5VWN6 2430 aa9.28□□□□□ -0.92
SH3RF1-203ENST00000508685 ELOA3CA0A087WX78 387 aaPredicted RBP9.27□□□□□ -0.92
SH3RF1-203ENST00000508685 J3QT63 122 aa9.27□□□□□ -0.92
SH3RF1-203ENST00000508685 IGLV1-44P01699 117 aa9.27□□□□□ -0.92
SH3RF1-203ENST00000508685 S100A2P29034 98 aa9.27□□□□□ -0.92
SH3RF1-203ENST00000508685 DNLZQ5SXM8 178 aa9.27□□□□□ -0.92
SH3RF1-203ENST00000508685 CYB561D1Q8N8Q1 229 aa9.27□□□□□ -0.92
SH3RF1-203ENST00000508685 ZBTB34Q8NCN2 500 aa9.27□□□□□ -0.92
SH3RF1-203ENST00000508685 FAM57AQ8TBR7 257 aa9.27□□□□□ -0.92
SH3RF1-203ENST00000508685 S100PBPQ96BU1 408 aa9.27□□□□□ -0.92
SH3RF1-203ENST00000508685 RTL8AQ9BWD3 113 aa9.27□□□□□ -0.92
SH3RF1-203ENST00000508685 CTDSP1Q9GZU7 261 aa9.27□□□□□ -0.92
SH3RF1-203ENST00000508685 CADP27708 2225 aa9.27□□□□□ -0.93
SH3RF1-203ENST00000508685 TRAV24A0A0B4J272 114 aa9.27□□□□□ -0.93
SH3RF1-203ENST00000508685 IQCF6A8MYZ5 107 aa9.27□□□□□ -0.93
SH3RF1-203ENST00000508685 SEC14L6B5MCN3 397 aa9.27□□□□□ -0.93
SH3RF1-203ENST00000508685 PPIHO43447 177 aaKnown RBP9.27□□□□□ -0.93
SH3RF1-203ENST00000508685 FAM87AP0C7U9 286 aa9.27□□□□□ -0.93
SH3RF1-203ENST00000508685 EPHA1P21709 976 aa9.27□□□□□ -0.93
SH3RF1-203ENST00000508685 TDGF1P3P51864 188 aa9.27□□□□□ -0.93
SH3RF1-203ENST00000508685 KRTCAP3Q53RY4 240 aa9.27□□□□□ -0.93
SH3RF1-203ENST00000508685 SCCPDHQ8NBX0 429 aa9.27□□□□□ -0.93
SH3RF1-203ENST00000508685 PSENENQ9NZ42 101 aa9.27□□□□□ -0.93
SH3RF1-203ENST00000508685 TINAGQ9UJW2 476 aa9.27□□□□□ -0.93
SH3RF1-203ENST00000508685 POLDIP2Q9Y2S7 368 aa9.27□□□□□ -0.93
SH3RF1-203ENST00000508685 TIMM9Q9Y5J7 89 aa9.27□□□□□ -0.93
SH3RF1-203ENST00000508685 SLC25A15Q9Y619 301 aa9.27□□□□□ -0.93
SH3RF1-203ENST00000508685 IGHV2OR16-5A0A0B4J2B6 119 aa9.26□□□□□ -0.93
SH3RF1-203ENST00000508685 CDIPTO14735 213 aa9.26□□□□□ -0.93
SH3RF1-203ENST00000508685 HS3ST1O14792 307 aa9.26□□□□□ -0.93
SH3RF1-203ENST00000508685 MLNRO43193 412 aa9.26□□□□□ -0.93
SH3RF1-203ENST00000508685 TNFSF12O43508 249 aa9.26□□□□□ -0.93
SH3RF1-203ENST00000508685 BCL2P10415 239 aa9.26□□□□□ -0.93
SH3RF1-203ENST00000508685 PSG2P11465 335 aa9.26□□□□□ -0.93
SH3RF1-203ENST00000508685 BMP5P22003 454 aa9.26□□□□□ -0.93
SH3RF1-203ENST00000508685 TIMP3P35625 211 aa9.26□□□□□ -0.93
SH3RF1-203ENST00000508685 FABP6P51161 128 aa9.26□□□□□ -0.93
SH3RF1-203ENST00000508685 HOXA4Q00056 320 aaPredicted RBP9.26□□□□□ -0.93
SH3RF1-203ENST00000508685 RUNX1Q01196 453 aa9.26□□□□□ -0.93
SH3RF1-203ENST00000508685 ATP6V1FQ16864 119 aa9.26□□□□□ -0.93
SH3RF1-203ENST00000508685 ZNF674Q2M3X9 581 aa9.26□□□□□ -0.93
SH3RF1-203ENST00000508685 LRRC75BQ2VPJ9 315 aa9.26□□□□□ -0.93
SH3RF1-203ENST00000508685 PRR30Q53SZ7 412 aaPredicted RBP9.26□□□□□ -0.93
SH3RF1-203ENST00000508685 ZNF787Q6DD87 383 aa9.26□□□□□ -0.93
SH3RF1-203ENST00000508685 MRGPRGQ86SM5 289 aa9.26□□□□□ -0.93
SH3RF1-203ENST00000508685 GAR1Q9NY12 217 aaKnown RBP9.26□□□□□ -0.93
SH3RF1-203ENST00000508685 ZMAT5Q9UDW3 170 aaKnown RBP9.26□□□□□ -0.93
SH3RF1-203ENST00000508685 MIOXQ9UGB7 285 aa9.26□□□□□ -0.93
SH3RF1-203ENST00000508685 DMRT1Q9Y5R6 373 aa9.26□□□□□ -0.93
SH3RF1-203ENST00000508685 IGSF10Q6WRI0 2623 aa9.26□□□□□ -0.93
SH3RF1-203ENST00000508685 CLDN34H7C241 214 aa9.26□□□□□ -0.93
SH3RF1-203ENST00000508685 GRPP07492 148 aa9.26□□□□□ -0.93
SH3RF1-203ENST00000508685 ZNF83P51522 516 aa9.26□□□□□ -0.93
SH3RF1-203ENST00000508685 RND2P52198 227 aa9.26□□□□□ -0.93
SH3RF1-203ENST00000508685 TMEM41BQ5BJD5 291 aa9.26□□□□□ -0.93
SH3RF1-203ENST00000508685 Q6P435 159 aa9.26□□□□□ -0.93
SH3RF1-203ENST00000508685 C20orf204Q6ZNR8 217 aa9.26□□□□□ -0.93
SH3RF1-203ENST00000508685 C1orf87Q8N0U7 546 aa9.26□□□□□ -0.93
SH3RF1-203ENST00000508685 ZNF525Q8N782 197 aa9.26□□□□□ -0.93
SH3RF1-203ENST00000508685 RDH5Q92781 318 aa9.26□□□□□ -0.93
SH3RF1-203ENST00000508685 OBP2BQ9NPH6 170 aa9.26□□□□□ -0.93
SH3RF1-203ENST00000508685 CACNG5Q9UF02 275 aa9.26□□□□□ -0.93
SH3RF1-203ENST00000508685 VAX2Q9UIW0 290 aa9.26□□□□□ -0.93
SH3RF1-203ENST00000508685 SH3BGRL2Q9UJC5 107 aa9.26□□□□□ -0.93
SH3RF1-203ENST00000508685 ZGRF1Q86YA3 2104 aa9.25□□□□□ -0.93
SH3RF1-203ENST00000508685 ATRXP46100 2492 aa9.25□□□□□ -0.93
SH3RF1-203ENST00000508685 CYB5R3P00387 301 aaPredicted RBP9.25□□□□□ -0.93
SH3RF1-203ENST00000508685 FBP1P09467 338 aa9.25□□□□□ -0.93
SH3RF1-203ENST00000508685 CEBPGP53567 150 aa9.25□□□□□ -0.93
SH3RF1-203ENST00000508685 MSMO1Q15800 293 aa9.25□□□□□ -0.93
SH3RF1-203ENST00000508685 C22orf34Q6ZV56 151 aa9.25□□□□□ -0.93
SH3RF1-203ENST00000508685 DOLPP1Q86YN1 238 aa9.25□□□□□ -0.93
SH3RF1-203ENST00000508685 TCTEX1D1Q8N7M0 179 aa9.25□□□□□ -0.93
SH3RF1-203ENST00000508685 OR51H1Q8NH63 302 aa9.25□□□□□ -0.93
SH3RF1-203ENST00000508685 Q8WTZ3 238 aa9.25□□□□□ -0.93
SH3RF1-203ENST00000508685 MSL2Q9HCI7 577 aa9.25□□□□□ -0.93
SH3RF1-203ENST00000508685 RPRMQ9NS64 109 aa9.25□□□□□ -0.93
SH3RF1-203ENST00000508685 GNG13Q9P2W3 67 aa9.25□□□□□ -0.93
SH3RF1-203ENST00000508685 WIPI2Q9Y4P8 454 aa9.25□□□□□ -0.93
SH3RF1-203ENST00000508685 RFNGQ9Y644 331 aa9.25□□□□□ -0.93
SH3RF1-203ENST00000508685 A0A0G2JRQ6 117 aa9.24□□□□□ -0.93
SH3RF1-203ENST00000508685 ZNF727A8MUV8 499 aa9.24□□□□□ -0.93
SH3RF1-203ENST00000508685 LINC00587B1AMM8 73 aa9.24□□□□□ -0.93
SH3RF1-203ENST00000508685 SH2D1BO14796 132 aa9.24□□□□□ -0.93
SH3RF1-203ENST00000508685 TIMM8AO60220 97 aaPredicted RBP9.24□□□□□ -0.93
SH3RF1-203ENST00000508685 IGHV2-70P01814 119 aa9.24□□□□□ -0.93
SH3RF1-203ENST00000508685 MBP02144 154 aa9.24□□□□□ -0.93
SH3RF1-203ENST00000508685 OPN1MWP04001 364 aa9.24□□□□□ -0.93
SH3RF1-203ENST00000508685 OPN1MW2P0DN77 364 aa9.24□□□□□ -0.93
SH3RF1-203ENST00000508685 OPN1MW3P0DN78 364 aa9.24□□□□□ -0.93
SH3RF1-203ENST00000508685 CEACAM8P31997 349 aaPredicted RBP9.24□□□□□ -0.93
SH3RF1-203ENST00000508685 NDUFA6P56556 154 aa9.24□□□□□ -0.93
SH3RF1-203ENST00000508685 FIP1L1Q6UN15 594 aaKnown RBP9.24□□□□□ -0.93
SH3RF1-203ENST00000508685 ZNF497Q6ZNH5 498 aa9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms