RNA–Protein interactions for RNA: ENST00000508466.1

LIMCH1-207, Transcript of LIM and calponin homology domains 1, humanhuman

TSL 2

Gene LIMCH1, Length 3,051 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMCH1-207ENST00000508466 ELSPBP1Q96BH3 223 aa6.18□□□□□ -1.42
LIMCH1-207ENST00000508466 DDIT4LQ96D03 193 aa6.18□□□□□ -1.42
LIMCH1-207ENST00000508466 ZNF837Q96EG3 531 aaPredicted RBP6.18□□□□□ -1.42
LIMCH1-207ENST00000508466 THYN1Q9P016 225 aa6.18□□□□□ -1.42
LIMCH1-207ENST00000508466 TCFL5Q9UL49 500 aa6.18□□□□□ -1.42
LIMCH1-207ENST00000508466 HILPDAQ9Y5L2 63 aa6.18□□□□□ -1.42
LIMCH1-207ENST00000508466 IGKV1-12A0A0C4DH73 117 aa6.18□□□□□ -1.42
LIMCH1-207ENST00000508466 TAX1BP3O14907 124 aa6.18□□□□□ -1.42
LIMCH1-207ENST00000508466 IGKV1D-12P01611 117 aa6.18□□□□□ -1.42
LIMCH1-207ENST00000508466 CTXN2P0C2S0 81 aa6.18□□□□□ -1.42
LIMCH1-207ENST00000508466 RAC2P15153 192 aa6.18□□□□□ -1.42
LIMCH1-207ENST00000508466 CEACAM3P40198 252 aa6.18□□□□□ -1.42
LIMCH1-207ENST00000508466 CTRLP40313 264 aa6.18□□□□□ -1.42
LIMCH1-207ENST00000508466 CLRN1P58418 232 aa6.18□□□□□ -1.42
LIMCH1-207ENST00000508466 NHLH1Q02575 133 aa6.18□□□□□ -1.42
LIMCH1-207ENST00000508466 MTURNQ8N3F0 131 aa6.18□□□□□ -1.42
LIMCH1-207ENST00000508466 OR1L1Q8NH94 360 aa6.18□□□□□ -1.42
LIMCH1-207ENST00000508466 SRSF8Q9BRL6 282 aaKnown RBP6.18□□□□□ -1.42
LIMCH1-207ENST00000508466 APOOQ9BUR5 198 aa6.18□□□□□ -1.42
LIMCH1-207ENST00000508466 SSBP4Q9BWG4 385 aaPredicted RBP6.18□□□□□ -1.42
LIMCH1-207ENST00000508466 SSBP3Q9BWW4 388 aaPredicted RBP6.18□□□□□ -1.42
LIMCH1-207ENST00000508466 WDR61Q9GZS3 305 aaKnown RBP6.18□□□□□ -1.42
LIMCH1-207ENST00000508466 DEC1Q9P2X7 70 aa6.18□□□□□ -1.42
LIMCH1-207ENST00000508466 HSPB7Q9UBY9 170 aa6.18□□□□□ -1.42
LIMCH1-207ENST00000508466 SH3BGRL2Q9UJC5 107 aa6.18□□□□□ -1.42
LIMCH1-207ENST00000508466 TPRP12270 2363 aaKnown RBP6.18□□□□□ -1.42
LIMCH1-207ENST00000508466 RP1L1Q8IWN7 2480 aaPredicted RBP6.18□□□□□ -1.42
LIMCH1-207ENST00000508466 SPAARA0A1B0GVQ0 90 aa6.17□□□□□ -1.42
LIMCH1-207ENST00000508466 SCO2A0A1W2PP80 73 aa6.17□□□□□ -1.42
LIMCH1-207ENST00000508466 C19orf67A6NJJ6 358 aa6.17□□□□□ -1.42
LIMCH1-207ENST00000508466 TMEM150CB9EJG8 249 aa6.17□□□□□ -1.42
LIMCH1-207ENST00000508466 HS3ST1O14792 307 aa6.17□□□□□ -1.42
LIMCH1-207ENST00000508466 NPIPB7O75200 414 aa6.17□□□□□ -1.42
LIMCH1-207ENST00000508466 ZNF10P21506 573 aaPredicted RBP6.17□□□□□ -1.42
LIMCH1-207ENST00000508466 ARR3P36575 388 aa6.17□□□□□ -1.42
LIMCH1-207ENST00000508466 DEFB103AP81534 67 aa6.17□□□□□ -1.42
LIMCH1-207ENST00000508466 HTD2P86397 168 aa6.17□□□□□ -1.42
LIMCH1-207ENST00000508466 TM4SF20Q53R12 229 aa6.17□□□□□ -1.42
LIMCH1-207ENST00000508466 ADAMTSL4Q6UY14 1074 aa6.17□□□□□ -1.42
LIMCH1-207ENST00000508466 CORO2AQ92828 525 aa6.17□□□□□ -1.42
LIMCH1-207ENST00000508466 TM4SF19Q96DZ7 209 aa6.17□□□□□ -1.42
LIMCH1-207ENST00000508466 KLHDC7BQ96G42 594 aa6.17□□□□□ -1.42
LIMCH1-207ENST00000508466 RNASE7Q9H1E1 156 aaKnown RBP6.17□□□□□ -1.42
LIMCH1-207ENST00000508466 WDR54Q9H977 334 aa6.17□□□□□ -1.42
LIMCH1-207ENST00000508466 PRR14LQ5THK1 2151 aa6.17□□□□□ -1.42
LIMCH1-207ENST00000508466 A0A0U1RQV5 110 aa6.17□□□□□ -1.42
LIMCH1-207ENST00000508466 SERPINE3A8MV23 424 aa6.17□□□□□ -1.42
LIMCH1-207ENST00000508466 MMP23AO75900 390 aa6.17□□□□□ -1.42
LIMCH1-207ENST00000508466 PPBPP02775 128 aa6.17□□□□□ -1.42
LIMCH1-207ENST00000508466 CCNOP22674 350 aa6.17□□□□□ -1.42
LIMCH1-207ENST00000508466 RANP62826 216 aaKnown RBP6.17□□□□□ -1.42
LIMCH1-207ENST00000508466 HOXA4Q00056 320 aaPredicted RBP6.17□□□□□ -1.42
LIMCH1-207ENST00000508466 KIAA0895LQ68EN5 471 aa6.17□□□□□ -1.42
LIMCH1-207ENST00000508466 DOLPP1Q86YN1 238 aa6.17□□□□□ -1.42
LIMCH1-207ENST00000508466 FAM89BQ8N5H3 189 aa6.17□□□□□ -1.42
LIMCH1-207ENST00000508466 ZNF525Q8N782 197 aa6.17□□□□□ -1.42
LIMCH1-207ENST00000508466 SLC24A4Q8NFF2 622 aa6.17□□□□□ -1.42
LIMCH1-207ENST00000508466 OR4B1Q8NGF8 309 aa6.17□□□□□ -1.42
LIMCH1-207ENST00000508466 SVIPQ8NHG7 77 aa6.17□□□□□ -1.42
LIMCH1-207ENST00000508466 SFRP2Q96HF1 295 aa6.17□□□□□ -1.42
LIMCH1-207ENST00000508466 ZNF488Q96MN9 340 aa6.17□□□□□ -1.42
LIMCH1-207ENST00000508466 COLQQ9Y215 455 aaPredicted RBP6.17□□□□□ -1.42
LIMCH1-207ENST00000508466 MDFIC2A0A1B0GVS7 189 aa6.17□□□□□ -1.42
LIMCH1-207ENST00000508466 OR5B21A6NL26 309 aa6.17□□□□□ -1.42
LIMCH1-207ENST00000508466 WDR1O75083 606 aa6.17□□□□□ -1.42
LIMCH1-207ENST00000508466 TOMM40O96008 361 aa6.17□□□□□ -1.42
LIMCH1-207ENST00000508466 CA2P00918 260 aa6.17□□□□□ -1.42
LIMCH1-207ENST00000508466 KRASP01116 189 aa6.17□□□□□ -1.42
LIMCH1-207ENST00000508466 IFNA1P01562 189 aa6.17□□□□□ -1.42
LIMCH1-207ENST00000508466 CD1BP29016 333 aa6.17□□□□□ -1.42
LIMCH1-207ENST00000508466 ID3Q02535 119 aa6.17□□□□□ -1.42
LIMCH1-207ENST00000508466 PSG7Q13046 419 aa6.17□□□□□ -1.42
LIMCH1-207ENST00000508466 PIGCQ92535 297 aa6.17□□□□□ -1.42
LIMCH1-207ENST00000508466 BORCS7Q96B45 105 aa6.17□□□□□ -1.42
LIMCH1-207ENST00000508466 TMEM186Q96B77 213 aa6.17□□□□□ -1.42
LIMCH1-207ENST00000508466 SGK494Q96LW2 274 aa6.17□□□□□ -1.42
LIMCH1-207ENST00000508466 RAB11FIP5Q9BXF6 653 aa6.17□□□□□ -1.42
LIMCH1-207ENST00000508466 C11orf1Q9H5F2 150 aa6.17□□□□□ -1.42
LIMCH1-207ENST00000508466 PILRBQ9UKJ0 227 aa6.17□□□□□ -1.42
LIMCH1-207ENST00000508466 BOD1L1Q8NFC6 3051 aa6.16□□□□□ -1.42
LIMCH1-207ENST00000508466 CORTO00230 105 aa6.16□□□□□ -1.42
LIMCH1-207ENST00000508466 OR7C2O60412 319 aa6.16□□□□□ -1.42
LIMCH1-207ENST00000508466 DXOO77932 396 aaKnown RBP6.16□□□□□ -1.42
LIMCH1-207ENST00000508466 APOA2P02652 100 aa6.16□□□□□ -1.42
LIMCH1-207ENST00000508466 S100GP29377 79 aa6.16□□□□□ -1.42
LIMCH1-207ENST00000508466 GABRA2P47869 451 aa6.16□□□□□ -1.42
LIMCH1-207ENST00000508466 FABP6P51161 128 aa6.16□□□□□ -1.42
LIMCH1-207ENST00000508466 ZNF138P52744 262 aa6.16□□□□□ -1.42
LIMCH1-207ENST00000508466 STUMQ69YW2 141 aa6.16□□□□□ -1.42
LIMCH1-207ENST00000508466 RNASEKQ6P5S7 137 aaKnown RBP6.16□□□□□ -1.42
LIMCH1-207ENST00000508466 C17orf99Q6UX52 265 aa6.16□□□□□ -1.42
LIMCH1-207ENST00000508466 AGBL5Q8NDL9 886 aa6.16□□□□□ -1.42
LIMCH1-207ENST00000508466 OR1B1Q8NGR6 318 aa6.16□□□□□ -1.42
LIMCH1-207ENST00000508466 FLVCR1-AS1Q8TAF5 88 aa6.16□□□□□ -1.42
LIMCH1-207ENST00000508466 CT55Q8WUE5 264 aa6.16□□□□□ -1.42
LIMCH1-207ENST00000508466 ASB10Q8WXI3 467 aa6.16□□□□□ -1.42
LIMCH1-207ENST00000508466 RDH5Q92781 318 aa6.16□□□□□ -1.42
LIMCH1-207ENST00000508466 ZDHHC16Q969W1 377 aa6.16□□□□□ -1.42
LIMCH1-207ENST00000508466 APOBEC3DQ96AK3 386 aaPredicted RBP6.16□□□□□ -1.42
LIMCH1-207ENST00000508466 NEIL1Q96FI4 390 aaPredicted RBP6.16□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 112.8 ms