RNA–Protein interactions for RNA: ENST00000506537.1

PDLIM7-216, Transcript of PDZ and LIM domain 7, humanhuman

TSL 2

Gene PDLIM7, Length 636 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-216ENST00000506537 BEST4Q8NFU0 473 aa14.47□□□□□ -0.09
PDLIM7-216ENST00000506537 OR8U1Q8NH10 309 aa14.47□□□□□ -0.09
PDLIM7-216ENST00000506537 SNAPC3Q92966 411 aa14.47□□□□□ -0.09
PDLIM7-216ENST00000506537 CMTM3Q96MX0 182 aa14.47□□□□□ -0.09
PDLIM7-216ENST00000506537 OR2D2Q9H210 308 aa14.47□□□□□ -0.09
PDLIM7-216ENST00000506537 ZNF221Q9UK13 617 aa14.47□□□□□ -0.09
PDLIM7-216ENST00000506537 NCBP2LA6PVI3 153 aaKnown RBP14.46□□□□□ -0.09
PDLIM7-216ENST00000506537 H0YJW9 148 aa14.46□□□□□ -0.09
PDLIM7-216ENST00000506537 FCER2P06734 321 aa14.46□□□□□ -0.09
PDLIM7-216ENST00000506537 CNTFRP26992 372 aa14.46□□□□□ -0.09
PDLIM7-216ENST00000506537 FAM71E2Q8N5Q1 922 aa14.46□□□□□ -0.09
PDLIM7-216ENST00000506537 DRAXINQ8NBI3 349 aaPredicted RBP14.46□□□□□ -0.09
PDLIM7-216ENST00000506537 BCL7BQ9BQE9 202 aa14.46□□□□□ -0.09
PDLIM7-216ENST00000506537 SCOCQ9UIL1 159 aa14.46□□□□□ -0.09
PDLIM7-216ENST00000506537 OR5H14A6NHG9 310 aa14.45□□□□□ -0.1
PDLIM7-216ENST00000506537 HLA-DQB1P01920 261 aa14.45□□□□□ -0.1
PDLIM7-216ENST00000506537 CTXN2P0C2S0 81 aa14.45□□□□□ -0.1
PDLIM7-216ENST00000506537 NFYAP23511 347 aaPredicted RBP14.45□□□□□ -0.1
PDLIM7-216ENST00000506537 ACTBP60709 375 aa14.45□□□□□ -0.1
PDLIM7-216ENST00000506537 C11orf44Q8N8P7 122 aa14.45□□□□□ -0.1
PDLIM7-216ENST00000506537 ZNF383Q8NA42 475 aa14.45□□□□□ -0.1
PDLIM7-216ENST00000506537 ZNF436-AS1Q8NC38 126 aaPredicted RBP14.45□□□□□ -0.1
PDLIM7-216ENST00000506537 OR5AN1Q8NGI8 311 aa14.45□□□□□ -0.1
PDLIM7-216ENST00000506537 AP3S1Q92572 193 aa14.45□□□□□ -0.1
PDLIM7-216ENST00000506537 ISOC1Q96CN7 298 aa14.45□□□□□ -0.1
PDLIM7-216ENST00000506537 SDHAF2Q9NX18 166 aa14.45□□□□□ -0.1
PDLIM7-216ENST00000506537 ANAPC10Q9UM13 185 aa14.45□□□□□ -0.1
PDLIM7-216ENST00000506537 H3BMQ9 156 aa14.44□□□□□ -0.1
PDLIM7-216ENST00000506537 CBX5P45973 191 aa14.44□□□□□ -0.1
PDLIM7-216ENST00000506537 MMDQ15546 238 aa14.44□□□□□ -0.1
PDLIM7-216ENST00000506537 MZT2AQ6P582 158 aa14.44□□□□□ -0.1
PDLIM7-216ENST00000506537 OR8H1Q8NGG4 311 aa14.44□□□□□ -0.1
PDLIM7-216ENST00000506537 SGMS2Q8NHU3 365 aa14.44□□□□□ -0.1
PDLIM7-216ENST00000506537 DYNC2LI1Q8TCX1 351 aa14.44□□□□□ -0.1
PDLIM7-216ENST00000506537 LIN7CQ9NUP9 197 aaKnown RBP14.44□□□□□ -0.1
PDLIM7-216ENST00000506537 GAB2Q9UQC2 676 aa14.44□□□□□ -0.1
PDLIM7-216ENST00000506537 CEPT1Q9Y6K0 416 aa14.44□□□□□ -0.1
PDLIM7-216ENST00000506537 IGKV1D-13A0A0B4J2D9 117 aa14.43□□□□□ -0.1
PDLIM7-216ENST00000506537 LINC01548A6NM66 108 aa14.43□□□□□ -0.1
PDLIM7-216ENST00000506537 J3QRK9 145 aa14.43□□□□□ -0.1
PDLIM7-216ENST00000506537 M0R1X1 148 aa14.43□□□□□ -0.1
PDLIM7-216ENST00000506537 TUSC2O75896 110 aa14.43□□□□□ -0.1
PDLIM7-216ENST00000506537 IGHG2P01859 326 aa14.43□□□□□ -0.1
PDLIM7-216ENST00000506537 IGKV1-13P0DP09 117 aa14.43□□□□□ -0.1
PDLIM7-216ENST00000506537 CD28P10747 220 aa14.43□□□□□ -0.1
PDLIM7-216ENST00000506537 C10orf99Q6UWK7 81 aa14.43□□□□□ -0.1
PDLIM7-216ENST00000506537 MIXL1Q9H2W2 232 aa14.43□□□□□ -0.1
PDLIM7-216ENST00000506537 OR2W1Q9Y3N9 320 aa14.43□□□□□ -0.1
PDLIM7-216ENST00000506537 PEX14O75381 377 aa14.42□□□□□ -0.1
PDLIM7-216ENST00000506537 PRSS3P35030 304 aa14.42□□□□□ -0.1
PDLIM7-216ENST00000506537 ARPC4P59998 168 aa14.42□□□□□ -0.1
PDLIM7-216ENST00000506537 PRR31Q5SQ13 230 aa14.42□□□□□ -0.1
PDLIM7-216ENST00000506537 NOL4LQ96MY1 436 aaPredicted RBP14.42□□□□□ -0.1
PDLIM7-216ENST00000506537 HSPB9Q9BQS6 159 aa14.42□□□□□ -0.1
PDLIM7-216ENST00000506537 IFT46Q9NQC8 304 aa14.42□□□□□ -0.1
PDLIM7-216ENST00000506537 CCDC59Q9P031 241 aaKnown RBP14.42□□□□□ -0.1
PDLIM7-216ENST00000506537 MRPS7Q9Y2R9 242 aaKnown RBP14.42□□□□□ -0.1
PDLIM7-216ENST00000506537 WASHC3Q9Y3C0 194 aa14.42□□□□□ -0.1
PDLIM7-216ENST00000506537 RBM7Q9Y580 266 aaKnown RBP14.42□□□□□ -0.1
PDLIM7-216ENST00000506537 TET2Q6N021 2002 aaPredicted RBP14.42□□□□□ -0.1
PDLIM7-216ENST00000506537 FAM25AB3EWG3 89 aa14.41□□□□□ -0.1
PDLIM7-216ENST00000506537 FAM25CB3EWG5 89 aa14.41□□□□□ -0.1
PDLIM7-216ENST00000506537 FAM25GB3EWG6 89 aa14.41□□□□□ -0.1
PDLIM7-216ENST00000506537 NBR2O15453 112 aa14.41□□□□□ -0.1
PDLIM7-216ENST00000506537 FBXO24O75426 580 aa14.41□□□□□ -0.1
PDLIM7-216ENST00000506537 NDUFA3O95167 84 aa14.41□□□□□ -0.1
PDLIM7-216ENST00000506537 IGLV2-14P01704 120 aa14.41□□□□□ -0.1
PDLIM7-216ENST00000506537 IGKV1-16P04430 117 aa14.41□□□□□ -0.1
PDLIM7-216ENST00000506537 MC5RP33032 325 aa14.41□□□□□ -0.1
PDLIM7-216ENST00000506537 SOX6P35712 828 aa14.41□□□□□ -0.1
PDLIM7-216ENST00000506537 SLC35E3Q7Z769 313 aa14.41□□□□□ -0.1
PDLIM7-216ENST00000506537 SNX29P2Q8IUI4 249 aa14.41□□□□□ -0.1
PDLIM7-216ENST00000506537 NPBQ8NG41 125 aa14.41□□□□□ -0.1
PDLIM7-216ENST00000506537 GPX8Q8TED1 209 aa14.41□□□□□ -0.1
PDLIM7-216ENST00000506537 RASL11BQ9BPW5 248 aa14.41□□□□□ -0.1
PDLIM7-216ENST00000506537 RBM38Q9H0Z9 239 aaKnown RBP14.41□□□□□ -0.1
PDLIM7-216ENST00000506537 MGAM2Q2M2H8 2515 aa14.41□□□□□ -0.1
PDLIM7-216ENST00000506537 SMIM31A0A1B0GVY4 71 aa14.4□□□□□ -0.1
PDLIM7-216ENST00000506537 H7C2Y5 167 aa14.4□□□□□ -0.1
PDLIM7-216ENST00000506537 CTDSP2O14595 271 aa14.4□□□□□ -0.1
PDLIM7-216ENST00000506537 NOL3O60936 208 aaKnown RBP14.4□□□□□ -0.1
PDLIM7-216ENST00000506537 NAT1P18440 290 aa14.4□□□□□ -0.1
PDLIM7-216ENST00000506537 LUMP51884 338 aaPredicted RBP14.4□□□□□ -0.1
PDLIM7-216ENST00000506537 TCTEX1D4Q5JR98 221 aa14.4□□□□□ -0.1
PDLIM7-216ENST00000506537 LAX1Q8IWV1 398 aa14.4□□□□□ -0.1
PDLIM7-216ENST00000506537 ZNF645Q8N7E2 425 aa14.4□□□□□ -0.1
PDLIM7-216ENST00000506537 OR5AU1Q8NGC0 362 aa14.4□□□□□ -0.1
PDLIM7-216ENST00000506537 OR5AP2Q8NGF4 316 aa14.4□□□□□ -0.1
PDLIM7-216ENST00000506537 NECAP2Q9NVZ3 263 aa14.4□□□□□ -0.1
PDLIM7-216ENST00000506537 ZNF107Q9UII5 783 aaPredicted RBP14.4□□□□□ -0.1
PDLIM7-216ENST00000506537 LINC00527Q9UJ94 153 aa14.4□□□□□ -0.1
PDLIM7-216ENST00000506537 LINC00473A8K010 186 aa14.39□□□□□ -0.11
PDLIM7-216ENST00000506537 TSPAN15O95858 294 aa14.39□□□□□ -0.11
PDLIM7-216ENST00000506537 APOA2P02652 100 aa14.39□□□□□ -0.11
PDLIM7-216ENST00000506537 OR5H8P0DN80 308 aa14.39□□□□□ -0.11
PDLIM7-216ENST00000506537 AADACP22760 399 aa14.39□□□□□ -0.11
PDLIM7-216ENST00000506537 FCGR2CP31995 323 aa14.39□□□□□ -0.11
PDLIM7-216ENST00000506537 DUTP33316 252 aaKnown RBP14.39□□□□□ -0.11
PDLIM7-216ENST00000506537 CDK10Q15131 360 aa14.39□□□□□ -0.11
PDLIM7-216ENST00000506537 C5orf64Q2M2E5 130 aa14.39□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 102 ms