RNA–Protein interactions for RNA: ENST00000502802.1

HMGB1P3-201, Transcript of high mobility group box 1 pseudogene 3, humanhuman

BASIC

Gene HMGB1P3, Length 616 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P3-201ENST00000502802 GATD1Q8NB37 220 aa3.1□□□□□ -1.91
HMGB1P3-201ENST00000502802 LFNGQ8NES3 379 aa3.1□□□□□ -1.91
HMGB1P3-201ENST00000502802 IMP3Q9NV31 184 aaKnown RBP3.1□□□□□ -1.91
HMGB1P3-201ENST00000502802 TMEM38BQ9NVV0 291 aa3.1□□□□□ -1.91
HMGB1P3-201ENST00000502802 EPG5Q9HCE0 2579 aa3.1□□□□□ -1.91
HMGB1P3-201ENST00000502802 ACACBO00763 2458 aa3.1□□□□□ -1.91
HMGB1P3-201ENST00000502802 PCNX2A6NKB5 2137 aa3.1□□□□□ -1.91
HMGB1P3-201ENST00000502802 PLXNB3Q9ULL4 1909 aa3.09□□□□□ -1.91
HMGB1P3-201ENST00000502802 IGHV2-26A0A0B4J1V2 119 aa3.09□□□□□ -1.91
HMGB1P3-201ENST00000502802 GMNCA6NCL1 334 aa3.09□□□□□ -1.91
HMGB1P3-201ENST00000502802 RPL36A-HNRNPH2H7BZ11 118 aa3.09□□□□□ -1.91
HMGB1P3-201ENST00000502802 K7EPK0 472 aa3.09□□□□□ -1.91
HMGB1P3-201ENST00000502802 GPR171O14626 319 aa3.09□□□□□ -1.91
HMGB1P3-201ENST00000502802 PHYHO14832 338 aa3.09□□□□□ -1.91
HMGB1P3-201ENST00000502802 ORM1P02763 201 aa3.09□□□□□ -1.91
HMGB1P3-201ENST00000502802 OR5AC1P0C628 307 aa3.09□□□□□ -1.91
HMGB1P3-201ENST00000502802 AKR1C4P17516 323 aa3.09□□□□□ -1.91
HMGB1P3-201ENST00000502802 AZU1P20160 251 aa3.09□□□□□ -1.91
HMGB1P3-201ENST00000502802 IDH2P48735 452 aaKnown RBP3.09□□□□□ -1.91
HMGB1P3-201ENST00000502802 TMEM241Q24JQ0 296 aa3.09□□□□□ -1.91
HMGB1P3-201ENST00000502802 GOLGA7BQ2TAP0 167 aa3.09□□□□□ -1.91
HMGB1P3-201ENST00000502802 NXNL2Q5VZ03 156 aa3.09□□□□□ -1.91
HMGB1P3-201ENST00000502802 C8orf74Q6P047 294 aa3.09□□□□□ -1.91
HMGB1P3-201ENST00000502802 PLCZ1Q86YW0 608 aa3.09□□□□□ -1.91
HMGB1P3-201ENST00000502802 DDI1Q8WTU0 396 aa3.09□□□□□ -1.91
HMGB1P3-201ENST00000502802 ITLN2Q8WWU7 325 aaPredicted RBP3.09□□□□□ -1.91
HMGB1P3-201ENST00000502802 FGF13Q92913 245 aa3.09□□□□□ -1.91
HMGB1P3-201ENST00000502802 FXYD5Q96DB9 178 aa3.09□□□□□ -1.91
HMGB1P3-201ENST00000502802 OLFM3Q96PB7 478 aa3.09□□□□□ -1.91
HMGB1P3-201ENST00000502802 PEBP4Q96S96 227 aa3.09□□□□□ -1.91
HMGB1P3-201ENST00000502802 ZNF426Q9BUY5 554 aa3.09□□□□□ -1.91
HMGB1P3-201ENST00000502802 UGT2B28Q9BY64 529 aa3.09□□□□□ -1.91
HMGB1P3-201ENST00000502802 ULBP1Q9BZM6 244 aa3.09□□□□□ -1.91
HMGB1P3-201ENST00000502802 FBXL15Q9H469 300 aa3.09□□□□□ -1.91
HMGB1P3-201ENST00000502802 PARVGQ9HBI0 331 aa3.09□□□□□ -1.91
HMGB1P3-201ENST00000502802 HMGXB4Q9UGU5 601 aa3.09□□□□□ -1.91
HMGB1P3-201ENST00000502802 SLC22A7Q9Y694 548 aa3.09□□□□□ -1.91
HMGB1P3-201ENST00000502802 ASCC3Q8N3C0 2202 aaKnown RBP3.09□□□□□ -1.91
HMGB1P3-201ENST00000502802 FREM2Q5SZK8 3169 aa3.09□□□□□ -1.92
HMGB1P3-201ENST00000502802 CHD6Q8TD26 2715 aa3.09□□□□□ -1.92
HMGB1P3-201ENST00000502802 ASPMQ8IZT6 3477 aa3.09□□□□□ -1.92
HMGB1P3-201ENST00000502802 TNRC6BQ9UPQ9 1833 aaKnown RBP3.08□□□□□ -1.92
HMGB1P3-201ENST00000502802 IZUMO1RA6ND01 250 aa3.08□□□□□ -1.92
HMGB1P3-201ENST00000502802 KLRC4-KLRK1H3BQV0 150 aa3.08□□□□□ -1.92
HMGB1P3-201ENST00000502802 MFNGO00587 321 aa3.08□□□□□ -1.92
HMGB1P3-201ENST00000502802 LIN7AO14910 233 aaPredicted RBP3.08□□□□□ -1.92
HMGB1P3-201ENST00000502802 CDRT1O95170 752 aa3.08□□□□□ -1.92
HMGB1P3-201ENST00000502802 NRASP01111 189 aa3.08□□□□□ -1.92
HMGB1P3-201ENST00000502802 HRASP01112 189 aa3.08□□□□□ -1.92
HMGB1P3-201ENST00000502802 KRASP01116 189 aa3.08□□□□□ -1.92
HMGB1P3-201ENST00000502802 KCNE1P15382 129 aa3.08□□□□□ -1.92
HMGB1P3-201ENST00000502802 PYCR1P32322 319 aa3.08□□□□□ -1.92
HMGB1P3-201ENST00000502802 CCR2P41597 374 aa3.08□□□□□ -1.92
HMGB1P3-201ENST00000502802 PSMD7P51665 324 aa3.08□□□□□ -1.92
HMGB1P3-201ENST00000502802 BLVRAP53004 296 aa3.08□□□□□ -1.92
HMGB1P3-201ENST00000502802 FAM45BPQ6NSW5 357 aa3.08□□□□□ -1.92
HMGB1P3-201ENST00000502802 SLC25A45Q8N413 288 aa3.08□□□□□ -1.92
HMGB1P3-201ENST00000502802 OR2M3Q8NG83 312 aa3.08□□□□□ -1.92
HMGB1P3-201ENST00000502802 ERMNQ8TAM6 284 aa3.08□□□□□ -1.92
HMGB1P3-201ENST00000502802 KLF14Q8TD94 323 aaPredicted RBP3.08□□□□□ -1.92
HMGB1P3-201ENST00000502802 TCEAL4Q96EI5 215 aa3.08□□□□□ -1.92
HMGB1P3-201ENST00000502802 ARL5BQ96KC2 179 aa3.08□□□□□ -1.92
HMGB1P3-201ENST00000502802 SLC19A3Q9BZV2 496 aa3.08□□□□□ -1.92
HMGB1P3-201ENST00000502802 OR51E2Q9H255 320 aa3.08□□□□□ -1.92
HMGB1P3-201ENST00000502802 VCX3BQ9H321 246 aa3.08□□□□□ -1.92
HMGB1P3-201ENST00000502802 METTL17Q9H7H0 456 aaPredicted RBP3.08□□□□□ -1.92
HMGB1P3-201ENST00000502802 FAM60AQ9NP50 221 aa3.08□□□□□ -1.92
HMGB1P3-201ENST00000502802 PLXND1Q9Y4D7 1925 aa3.08□□□□□ -1.92
HMGB1P3-201ENST00000502802 CEP295Q9C0D2 2601 aa3.08□□□□□ -1.92
HMGB1P3-201ENST00000502802 USP24Q9UPU5 2620 aa3.08□□□□□ -1.92
HMGB1P3-201ENST00000502802 KNL1Q8NG31 2342 aa3.08□□□□□ -1.92
HMGB1P3-201ENST00000502802 LOC400499M0QZD8 3231 aa3.07□□□□□ -1.92
HMGB1P3-201ENST00000502802 ZNF98A6NK75 572 aa3.07□□□□□ -1.92
HMGB1P3-201ENST00000502802 A8MUU9 505 aa3.07□□□□□ -1.92
HMGB1P3-201ENST00000502802 C8orf87E5RJ46 101 aa3.07□□□□□ -1.92
HMGB1P3-201ENST00000502802 FTCDNL1E5RQL4 147 aa3.07□□□□□ -1.92
HMGB1P3-201ENST00000502802 F5H5K5 113 aa3.07□□□□□ -1.92
HMGB1P3-201ENST00000502802 SLC16A4O15374 487 aa3.07□□□□□ -1.92
HMGB1P3-201ENST00000502802 SLC31A1O15431 190 aa3.07□□□□□ -1.92
HMGB1P3-201ENST00000502802 FGF16O43320 207 aa3.07□□□□□ -1.92
HMGB1P3-201ENST00000502802 TRAPPC3O43617 180 aa3.07□□□□□ -1.92
HMGB1P3-201ENST00000502802 TCF21O43680 179 aa3.07□□□□□ -1.92
HMGB1P3-201ENST00000502802 ADAP1O75689 374 aa3.07□□□□□ -1.92
HMGB1P3-201ENST00000502802 RBBP9O75884 186 aa3.07□□□□□ -1.92
HMGB1P3-201ENST00000502802 ARPP19P56211 112 aa3.07□□□□□ -1.92
HMGB1P3-201ENST00000502802 EXOC3L4Q17RC7 722 aa3.07□□□□□ -1.92
HMGB1P3-201ENST00000502802 MRPL2Q5T653 305 aaKnown RBP3.07□□□□□ -1.92
HMGB1P3-201ENST00000502802 SDHAF4Q5VUM1 108 aa3.07□□□□□ -1.92
HMGB1P3-201ENST00000502802 TMEM215Q68D42 235 aa3.07□□□□□ -1.92
HMGB1P3-201ENST00000502802 TBPL2Q6SJ96 375 aa3.07□□□□□ -1.92
HMGB1P3-201ENST00000502802 CLEC20AQ6ZU45 233 aa3.07□□□□□ -1.92
HMGB1P3-201ENST00000502802 OLIG3Q7RTU3 272 aa3.07□□□□□ -1.92
HMGB1P3-201ENST00000502802 DAZ4Q86SG3 579 aaKnown RBP3.07□□□□□ -1.92
HMGB1P3-201ENST00000502802 ZNF615Q8N8J6 731 aa3.07□□□□□ -1.92
HMGB1P3-201ENST00000502802 ZIC4Q8N9L1 334 aa3.07□□□□□ -1.92
HMGB1P3-201ENST00000502802 TMEM161BQ8NDZ6 487 aa3.07□□□□□ -1.92
HMGB1P3-201ENST00000502802 OR2K2Q8NGT1 345 aa3.07□□□□□ -1.92
HMGB1P3-201ENST00000502802 DTD1Q8TEA8 209 aa3.07□□□□□ -1.92
HMGB1P3-201ENST00000502802 CLDN23Q96B33 292 aa3.07□□□□□ -1.92
HMGB1P3-201ENST00000502802 EBPLQ9BY08 206 aa3.07□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms