RNA–Protein interactions for RNA: ENST00000493648.1

TOP3A-207, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 2

Gene TOP3A, Length 503 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-207ENST00000493648 RPS19P39019 145 aaKnown RBP5.52□□□□□ -1.53
TOP3A-207ENST00000493648 ZNF260Q3ZCT1 412 aa5.52□□□□□ -1.53
TOP3A-207ENST00000493648 HIST2H2BDQ6DRA6 164 aa5.52□□□□□ -1.53
TOP3A-207ENST00000493648 LIN54Q6MZP7 749 aa5.52□□□□□ -1.53
TOP3A-207ENST00000493648 CNIH2Q6PI25 160 aa5.52□□□□□ -1.53
TOP3A-207ENST00000493648 STPG2Q8N412 459 aa5.52□□□□□ -1.53
TOP3A-207ENST00000493648 FAM71E2Q8N5Q1 922 aa5.52□□□□□ -1.53
TOP3A-207ENST00000493648 COMMD1Q8N668 190 aa5.52□□□□□ -1.53
TOP3A-207ENST00000493648 ZNF436-AS1Q8NC38 126 aaPredicted RBP5.52□□□□□ -1.53
TOP3A-207ENST00000493648 NPBQ8NG41 125 aa5.52□□□□□ -1.53
TOP3A-207ENST00000493648 OR5H6Q8NGV6 325 aa5.52□□□□□ -1.53
TOP3A-207ENST00000493648 OR8U1Q8NH10 309 aa5.52□□□□□ -1.53
TOP3A-207ENST00000493648 MAFIPQ8WZ33 124 aa5.52□□□□□ -1.53
TOP3A-207ENST00000493648 R3HDM4Q96D70 268 aa5.52□□□□□ -1.53
TOP3A-207ENST00000493648 RITA1Q96K30 269 aa5.52□□□□□ -1.53
TOP3A-207ENST00000493648 NOL4LQ96MY1 436 aaPredicted RBP5.52□□□□□ -1.53
TOP3A-207ENST00000493648 RNF5Q99942 180 aa5.52□□□□□ -1.53
TOP3A-207ENST00000493648 CABLES2Q9BTV7 478 aa5.52□□□□□ -1.53
TOP3A-207ENST00000493648 FUNDC2Q9BWH2 189 aa5.52□□□□□ -1.53
TOP3A-207ENST00000493648 PARP12Q9H0J9 701 aaKnown RBP5.52□□□□□ -1.53
TOP3A-207ENST00000493648 ELF5Q9UKW6 265 aaPredicted RBP5.52□□□□□ -1.53
TOP3A-207ENST00000493648 WASHC3Q9Y3C0 194 aa5.52□□□□□ -1.53
TOP3A-207ENST00000493648 A0A1W2PRX2 142 aa5.51□□□□□ -1.53
TOP3A-207ENST00000493648 TMEM235A6NFC5 223 aa5.51□□□□□ -1.53
TOP3A-207ENST00000493648 LINC01548A6NM66 108 aa5.51□□□□□ -1.53
TOP3A-207ENST00000493648 H0YJW9 148 aa5.51□□□□□ -1.53
TOP3A-207ENST00000493648 M0R1X1 148 aa5.51□□□□□ -1.53
TOP3A-207ENST00000493648 APOA2P02652 100 aa5.51□□□□□ -1.53
TOP3A-207ENST00000493648 TFAP2AP05549 437 aa5.51□□□□□ -1.53
TOP3A-207ENST00000493648 PF4V1P10720 104 aa5.51□□□□□ -1.53
TOP3A-207ENST00000493648 VDAC1P21796 283 aa5.51□□□□□ -1.53
TOP3A-207ENST00000493648 TGFBR1P36897 503 aa5.51□□□□□ -1.53
TOP3A-207ENST00000493648 RPS16P62249 146 aaKnown RBP5.51□□□□□ -1.53
TOP3A-207ENST00000493648 TAGLNQ01995 201 aaKnown RBP5.51□□□□□ -1.53
TOP3A-207ENST00000493648 CBX3Q13185 183 aa5.51□□□□□ -1.53
TOP3A-207ENST00000493648 PLGLAQ15195 96 aa5.51□□□□□ -1.53
TOP3A-207ENST00000493648 C5orf64Q2M2E5 130 aa5.51□□□□□ -1.53
TOP3A-207ENST00000493648 TCTEX1D4Q5JR98 221 aa5.51□□□□□ -1.53
TOP3A-207ENST00000493648 KHDC1LQ5JSQ8 128 aa5.51□□□□□ -1.53
TOP3A-207ENST00000493648 UBE2NLQ5JXB2 153 aa5.51□□□□□ -1.53
TOP3A-207ENST00000493648 TEX38Q6PEX7 206 aa5.51□□□□□ -1.53
TOP3A-207ENST00000493648 FAM131AQ6UXB0 335 aa5.51□□□□□ -1.53
TOP3A-207ENST00000493648 GLDNQ6ZMI3 551 aaPredicted RBP5.51□□□□□ -1.53
TOP3A-207ENST00000493648 ZNF329Q86UD4 541 aa5.51□□□□□ -1.53
TOP3A-207ENST00000493648 H1FOOQ8IZA3 346 aaPredicted RBP5.51□□□□□ -1.53
TOP3A-207ENST00000493648 DRAXINQ8NBI3 349 aaPredicted RBP5.51□□□□□ -1.53
TOP3A-207ENST00000493648 OR5AN1Q8NGI8 311 aa5.51□□□□□ -1.53
TOP3A-207ENST00000493648 OR13F1Q8NGS4 319 aa5.51□□□□□ -1.53
TOP3A-207ENST00000493648 NUDCD2Q8WVJ2 157 aa5.51□□□□□ -1.53
TOP3A-207ENST00000493648 SLC25A46Q96AG3 418 aa5.51□□□□□ -1.53
TOP3A-207ENST00000493648 OR2D2Q9H210 308 aa5.51□□□□□ -1.53
TOP3A-207ENST00000493648 ZFP57Q9NU63 452 aa5.51□□□□□ -1.53
TOP3A-207ENST00000493648 ZNF107Q9UII5 783 aaPredicted RBP5.51□□□□□ -1.53
TOP3A-207ENST00000493648 LINC00527Q9UJ94 153 aa5.51□□□□□ -1.53
TOP3A-207ENST00000493648 IGKV1D-8A0A087WSZ0 117 aa5.5□□□□□ -1.53
TOP3A-207ENST00000493648 SMIM31A0A1B0GVY4 71 aa5.5□□□□□ -1.53
TOP3A-207ENST00000493648 ADARB2-AS1A8MUL3 147 aa5.5□□□□□ -1.53
TOP3A-207ENST00000493648 RRHO14718 337 aa5.5□□□□□ -1.53
TOP3A-207ENST00000493648 WIPF1O43516 503 aa5.5□□□□□ -1.53
TOP3A-207ENST00000493648 XRCC3O43542 346 aa5.5□□□□□ -1.53
TOP3A-207ENST00000493648 SSX5O60225 188 aa5.5□□□□□ -1.53
TOP3A-207ENST00000493648 PROP1O75360 226 aa5.5□□□□□ -1.53
TOP3A-207ENST00000493648 SLC22A5O76082 557 aa5.5□□□□□ -1.53
TOP3A-207ENST00000493648 NDUFA3O95167 84 aa5.5□□□□□ -1.53
TOP3A-207ENST00000493648 HLA-DRB1P01911 266 aa5.5□□□□□ -1.53
TOP3A-207ENST00000493648 IGF1P05019 195 aa5.5□□□□□ -1.53
TOP3A-207ENST00000493648 OR5H8P0DN80 308 aa5.5□□□□□ -1.53
TOP3A-207ENST00000493648 RRASP10301 218 aa5.5□□□□□ -1.53
TOP3A-207ENST00000493648 CNTFRP26992 372 aa5.5□□□□□ -1.53
TOP3A-207ENST00000493648 CBX5P45973 191 aa5.5□□□□□ -1.53
TOP3A-207ENST00000493648 LGALS7P47929 136 aa5.5□□□□□ -1.53
TOP3A-207ENST00000493648 THBS3P49746 956 aa5.5□□□□□ -1.53
TOP3A-207ENST00000493648 RORCP51449 518 aa5.5□□□□□ -1.53
TOP3A-207ENST00000493648 LUMP51884 338 aaPredicted RBP5.5□□□□□ -1.53
TOP3A-207ENST00000493648 ARPC4P59998 168 aa5.5□□□□□ -1.53
TOP3A-207ENST00000493648 VBP1P61758 197 aa5.5□□□□□ -1.53
TOP3A-207ENST00000493648 NCS1P62166 190 aa5.5□□□□□ -1.53
TOP3A-207ENST00000493648 ZNF660Q6AZW8 331 aaPredicted RBP5.5□□□□□ -1.53
TOP3A-207ENST00000493648 C10orf99Q6UWK7 81 aa5.5□□□□□ -1.53
TOP3A-207ENST00000493648 HOGA1Q86XE5 327 aa5.5□□□□□ -1.53
TOP3A-207ENST00000493648 ANKRD13BQ86YJ7 626 aa5.5□□□□□ -1.53
TOP3A-207ENST00000493648 PDPNQ86YL7 162 aa5.5□□□□□ -1.53
TOP3A-207ENST00000493648 SAMD12Q8N8I0 201 aa5.5□□□□□ -1.53
TOP3A-207ENST00000493648 ZNF383Q8NA42 475 aa5.5□□□□□ -1.53
TOP3A-207ENST00000493648 BEST4Q8NFU0 473 aa5.5□□□□□ -1.53
TOP3A-207ENST00000493648 ACOT12Q8WYK0 555 aa5.5□□□□□ -1.53
TOP3A-207ENST00000493648 FLYWCH2Q96CP2 140 aaKnown RBP5.5□□□□□ -1.53
TOP3A-207ENST00000493648 SLC25A38Q96DW6 304 aa5.5□□□□□ -1.53
TOP3A-207ENST00000493648 RBMXL1Q96E39 390 aaKnown RBP5.5□□□□□ -1.53
TOP3A-207ENST00000493648 ADTRPQ96IZ2 230 aa5.5□□□□□ -1.53
TOP3A-207ENST00000493648 CMTM3Q96MX0 182 aa5.5□□□□□ -1.53
TOP3A-207ENST00000493648 TSNAXQ99598 290 aaKnown RBP5.5□□□□□ -1.53
TOP3A-207ENST00000493648 HSPB9Q9BQS6 159 aa5.5□□□□□ -1.53
TOP3A-207ENST00000493648 MRPS26Q9BYN8 205 aaKnown RBP5.5□□□□□ -1.53
TOP3A-207ENST00000493648 OR51J1Q9H342 316 aa5.5□□□□□ -1.53
TOP3A-207ENST00000493648 FBXL15Q9H469 300 aa5.5□□□□□ -1.53
TOP3A-207ENST00000493648 AUNIPQ9H7T9 357 aa5.5□□□□□ -1.53
TOP3A-207ENST00000493648 SLC35D1Q9NTN3 355 aa5.5□□□□□ -1.53
TOP3A-207ENST00000493648 SDHAF2Q9NX18 166 aa5.5□□□□□ -1.53
TOP3A-207ENST00000493648 ANXA10Q9UJ72 324 aa5.5□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms