RNA–Protein interactions for RNA: ENST00000489537.5

SF3A3-208, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 4

Gene SF3A3, Length 891 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-208ENST00000489537 TRBV23-1A0A0A0MS06 115 aa5.31□□□□□ -1.56
SF3A3-208ENST00000489537 IGKV1-6A0A0C4DH72 117 aa5.31□□□□□ -1.56
SF3A3-208ENST00000489537 KBTBD11-OT1A0A1B0GTJ5 212 aa5.31□□□□□ -1.56
SF3A3-208ENST00000489537 KRBOX1C9JBD0 128 aa5.31□□□□□ -1.56
SF3A3-208ENST00000489537 C12orf77C9JDV5 145 aa5.31□□□□□ -1.56
SF3A3-208ENST00000489537 PPIAL4DF5H284 164 aa5.31□□□□□ -1.56
SF3A3-208ENST00000489537 HSD17B6O14756 317 aa5.31□□□□□ -1.56
SF3A3-208ENST00000489537 PSPNO60542 156 aa5.31□□□□□ -1.56
SF3A3-208ENST00000489537 TSPAN9O75954 239 aa5.31□□□□□ -1.56
SF3A3-208ENST00000489537 OR8U9P0C7N5 309 aa5.31□□□□□ -1.56
SF3A3-208ENST00000489537 PPIAL4FP0DN26 164 aa5.31□□□□□ -1.56
SF3A3-208ENST00000489537 RRASP10301 218 aa5.31□□□□□ -1.56
SF3A3-208ENST00000489537 CCKARP32238 428 aa5.31□□□□□ -1.56
SF3A3-208ENST00000489537 PPOXP50336 477 aa5.31□□□□□ -1.56
SF3A3-208ENST00000489537 AKR1C2P52895 323 aa5.31□□□□□ -1.56
SF3A3-208ENST00000489537 ATP5IP56385 69 aaPredicted RBP5.31□□□□□ -1.56
SF3A3-208ENST00000489537 ERVK-16P61578 105 aa5.31□□□□□ -1.56
SF3A3-208ENST00000489537 HBG1P69891 147 aa5.31□□□□□ -1.56
SF3A3-208ENST00000489537 HBG2P69892 147 aa5.31□□□□□ -1.56
SF3A3-208ENST00000489537 GTF3C1Q12789 2109 aa5.31□□□□□ -1.56
SF3A3-208ENST00000489537 HFEQ30201 348 aa5.31□□□□□ -1.56
SF3A3-208ENST00000489537 STUMQ69YW2 141 aa5.31□□□□□ -1.56
SF3A3-208ENST00000489537 ADAM5Q6NVV9 412 aa5.31□□□□□ -1.56
SF3A3-208ENST00000489537 MEX3BQ6ZN04 569 aaKnown RBP5.31□□□□□ -1.56
SF3A3-208ENST00000489537 ZNF788Q6ZQV5 615 aa5.31□□□□□ -1.56
SF3A3-208ENST00000489537 ZNF826PQ6ZT77 177 aa5.31□□□□□ -1.56
SF3A3-208ENST00000489537 HSD17B13Q7Z5P4 300 aaPredicted RBP5.31□□□□□ -1.56
SF3A3-208ENST00000489537 SELENOHQ8IZQ5 122 aaKnown RBP5.31□□□□□ -1.56
SF3A3-208ENST00000489537 EIF4E3Q8N5X7 224 aaKnown RBP5.31□□□□□ -1.56
SF3A3-208ENST00000489537 OR2C3Q8N628 320 aa5.31□□□□□ -1.56
SF3A3-208ENST00000489537 C8orf31Q8N9H6 132 aa5.31□□□□□ -1.56
SF3A3-208ENST00000489537 OR4D5Q8NGN0 318 aa5.31□□□□□ -1.56
SF3A3-208ENST00000489537 OR8U1Q8NH10 309 aa5.31□□□□□ -1.56
SF3A3-208ENST00000489537 OR51H1Q8NH63 302 aa5.31□□□□□ -1.56
SF3A3-208ENST00000489537 OR1S1Q8NH92 325 aa5.31□□□□□ -1.56
SF3A3-208ENST00000489537 FAM168AQ92567 244 aa5.31□□□□□ -1.56
SF3A3-208ENST00000489537 GNPNAT1Q96EK6 184 aaPredicted RBP5.31□□□□□ -1.56
SF3A3-208ENST00000489537 TIMD4Q96H15 378 aa5.31□□□□□ -1.56
SF3A3-208ENST00000489537 COQ2Q96H96 371 aa5.31□□□□□ -1.56
SF3A3-208ENST00000489537 OR10C1Q96KK4 312 aa5.31□□□□□ -1.56
SF3A3-208ENST00000489537 WFIKKN1Q96NZ8 548 aa5.31□□□□□ -1.56
SF3A3-208ENST00000489537 S1PR3Q99500 378 aa5.31□□□□□ -1.56
SF3A3-208ENST00000489537 RNF126Q9BV68 326 aa5.31□□□□□ -1.56
SF3A3-208ENST00000489537 RAB1BQ9H0U4 201 aa5.31□□□□□ -1.56
SF3A3-208ENST00000489537 CCL28Q9NRJ3 127 aa5.31□□□□□ -1.56
SF3A3-208ENST00000489537 CTNNBIP1Q9NSA3 81 aaPredicted RBP5.31□□□□□ -1.56
SF3A3-208ENST00000489537 CLN8Q9UBY8 286 aa5.31□□□□□ -1.56
SF3A3-208ENST00000489537 SH3BGRL2Q9UJC5 107 aa5.31□□□□□ -1.56
SF3A3-208ENST00000489537 PPIAL4AQ9Y536 164 aa5.31□□□□□ -1.56
SF3A3-208ENST00000489537 AUP1Q9Y679 476 aa5.31□□□□□ -1.56
SF3A3-208ENST00000489537 LINC00312Q9Y6C7 94 aa5.31□□□□□ -1.56
SF3A3-208ENST00000489537 RTTNQ86VV8 2226 aa5.31□□□□□ -1.56
SF3A3-208ENST00000489537 MYO7BQ6PIF6 2116 aa5.3□□□□□ -1.56
SF3A3-208ENST00000489537 DOPEY1Q5JWR5 2465 aa5.3□□□□□ -1.56
SF3A3-208ENST00000489537 SVILO95425 2214 aa5.3□□□□□ -1.56
SF3A3-208ENST00000489537 IGKV1D-17A0A075B6S4 117 aa5.3□□□□□ -1.56
SF3A3-208ENST00000489537 KRTAP4-8A0A0G2JLE6 195 aa5.3□□□□□ -1.56
SF3A3-208ENST00000489537 A1L4Q6 167 aa5.3□□□□□ -1.56
SF3A3-208ENST00000489537 RAB19A4D1S5 217 aa5.3□□□□□ -1.56
SF3A3-208ENST00000489537 UMAD1C9J7I0 102 aa5.3□□□□□ -1.56
SF3A3-208ENST00000489537 TRIM77I1YAP6 450 aa5.3□□□□□ -1.56
SF3A3-208ENST00000489537 RAB29O14966 203 aa5.3□□□□□ -1.56
SF3A3-208ENST00000489537 HMGB3O15347 200 aaKnown RBP5.3□□□□□ -1.56
SF3A3-208ENST00000489537 NDUFB3O43676 98 aa5.3□□□□□ -1.56
SF3A3-208ENST00000489537 ZG16O60844 167 aa5.3□□□□□ -1.56
SF3A3-208ENST00000489537 SPDEFO95238 335 aa5.3□□□□□ -1.56
SF3A3-208ENST00000489537 CLDN14O95500 239 aa5.3□□□□□ -1.56
SF3A3-208ENST00000489537 CLDN1O95832 211 aa5.3□□□□□ -1.56
SF3A3-208ENST00000489537 SCGB1D2O95969 90 aa5.3□□□□□ -1.56
SF3A3-208ENST00000489537 HPRT1P00492 218 aa5.3□□□□□ -1.56
SF3A3-208ENST00000489537 MBPP02686 304 aaPredicted RBP5.3□□□□□ -1.56
SF3A3-208ENST00000489537 RBP4P02753 201 aa5.3□□□□□ -1.56
SF3A3-208ENST00000489537 THBDP07204 575 aa5.3□□□□□ -1.56
SF3A3-208ENST00000489537 SEC11BP0C7V7 166 aa5.3□□□□□ -1.56
SF3A3-208ENST00000489537 DAOP14920 347 aa5.3□□□□□ -1.56
SF3A3-208ENST00000489537 IL3RAP26951 378 aa5.3□□□□□ -1.56
SF3A3-208ENST00000489537 GPR12P47775 334 aa5.3□□□□□ -1.56
SF3A3-208ENST00000489537 EDDM3BP56851 147 aa5.3□□□□□ -1.56
SF3A3-208ENST00000489537 RAB2AP61019 212 aa5.3□□□□□ -1.56
SF3A3-208ENST00000489537 AESQ08117 197 aa5.3□□□□□ -1.56
SF3A3-208ENST00000489537 ATP6V1FQ16864 119 aa5.3□□□□□ -1.56
SF3A3-208ENST00000489537 SP6Q3SY56 376 aa5.3□□□□□ -1.56
SF3A3-208ENST00000489537 NMSQ5H8A3 153 aa5.3□□□□□ -1.56
SF3A3-208ENST00000489537 DHRS7BQ6IAN0 325 aaPredicted RBP5.3□□□□□ -1.56
SF3A3-208ENST00000489537 FAM71F2Q6NXP2 309 aa5.3□□□□□ -1.56
SF3A3-208ENST00000489537 DPPA3Q6W0C5 159 aa5.3□□□□□ -1.56
SF3A3-208ENST00000489537 IL34Q6ZMJ4 242 aa5.3□□□□□ -1.56
SF3A3-208ENST00000489537 LYZL2Q7Z4W2 148 aa5.3□□□□□ -1.56
SF3A3-208ENST00000489537 RTN4RL2Q86UN3 420 aa5.3□□□□□ -1.56
SF3A3-208ENST00000489537 LRP11Q86VZ4 500 aa5.3□□□□□ -1.56
SF3A3-208ENST00000489537 PRR18Q8N4B5 295 aa5.3□□□□□ -1.56
SF3A3-208ENST00000489537 CD177Q8N6Q3 437 aa5.3□□□□□ -1.56
SF3A3-208ENST00000489537 LFNGQ8NES3 379 aa5.3□□□□□ -1.56
SF3A3-208ENST00000489537 MRGPRDQ8TDS7 321 aa5.3□□□□□ -1.56
SF3A3-208ENST00000489537 NEU4Q8WWR8 484 aaPredicted RBP5.3□□□□□ -1.56
SF3A3-208ENST00000489537 PLPPR2Q96GM1 343 aa5.3□□□□□ -1.56
SF3A3-208ENST00000489537 TP53RKQ96S44 253 aa5.3□□□□□ -1.56
SF3A3-208ENST00000489537 OR2D2Q9H210 308 aa5.3□□□□□ -1.56
SF3A3-208ENST00000489537 LIME1Q9H400 295 aa5.3□□□□□ -1.56
SF3A3-208ENST00000489537 LYRM2Q9NU23 88 aaPredicted RBP5.3□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 74.4 ms