RNA–Protein interactions for RNA: ENST00000460569.1

UPF2-204, Transcript of UPF2, regulator of nonsense mediated mRNA decay, humanhuman

TSL 2

Gene UPF2, Length 640 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2-204ENST00000460569 DRAM1Q8N682 238 aa8.22□□□□□ -1.09
UPF2-204ENST00000460569 RTN4IP1Q8WWV3 396 aaPredicted RBP8.22□□□□□ -1.09
UPF2-204ENST00000460569 BORCS5Q969J3 196 aa8.22□□□□□ -1.09
UPF2-204ENST00000460569 ZDHHC16Q969W1 377 aa8.22□□□□□ -1.09
UPF2-204ENST00000460569 C5orf30Q96GV9 206 aa8.22□□□□□ -1.09
UPF2-204ENST00000460569 ZNF251Q9BRH9 671 aa8.22□□□□□ -1.09
UPF2-204ENST00000460569 C7orf50Q9BRJ6 194 aaKnown RBP8.22□□□□□ -1.09
UPF2-204ENST00000460569 MRPL20Q9BYC9 149 aaKnown RBP8.22□□□□□ -1.09
UPF2-204ENST00000460569 GHITMQ9H3K2 345 aa8.22□□□□□ -1.09
UPF2-204ENST00000460569 OCEL1Q9H607 264 aa8.22□□□□□ -1.09
UPF2-204ENST00000460569 CCL28Q9NRJ3 127 aa8.22□□□□□ -1.09
UPF2-204ENST00000460569 SDHAF2Q9NX18 166 aa8.22□□□□□ -1.09
UPF2-204ENST00000460569 SLC2A8Q9NY64 477 aa8.22□□□□□ -1.09
UPF2-204ENST00000460569 IGHV1-3A0A0C4DH29 117 aa8.21□□□□□ -1.1
UPF2-204ENST00000460569 A0A1W2PPI3 338 aa8.21□□□□□ -1.1
UPF2-204ENST00000460569 NAP1L6A6NFF2 107 aa8.21□□□□□ -1.1
UPF2-204ENST00000460569 TIMM23O14925 209 aa8.21□□□□□ -1.1
UPF2-204ENST00000460569 LYRM1O43325 122 aa8.21□□□□□ -1.1
UPF2-204ENST00000460569 LRRC75BQ2VPJ9 315 aa8.21□□□□□ -1.1
UPF2-204ENST00000460569 RBMS3Q6XE24 437 aaKnown RBP8.21□□□□□ -1.1
UPF2-204ENST00000460569 ZNF818PQ6ZRF7 136 aa8.21□□□□□ -1.1
UPF2-204ENST00000460569 MOB3BQ86TA1 216 aa8.21□□□□□ -1.1
UPF2-204ENST00000460569 OR8H3Q8N146 312 aa8.21□□□□□ -1.1
UPF2-204ENST00000460569 SIGLECL1Q8N7X8 197 aa8.21□□□□□ -1.1
UPF2-204ENST00000460569 DRAXINQ8NBI3 349 aaPredicted RBP8.21□□□□□ -1.1
UPF2-204ENST00000460569 TERB2Q8NHR7 220 aa8.21□□□□□ -1.1
UPF2-204ENST00000460569 MARCH1Q8TCQ1 289 aa8.21□□□□□ -1.1
UPF2-204ENST00000460569 ZNF48Q96MX3 618 aaPredicted RBP8.21□□□□□ -1.1
UPF2-204ENST00000460569 IGHV3-72A0A0B4J1Y9 119 aa8.2□□□□□ -1.1
UPF2-204ENST00000460569 GPR31O00270 319 aa8.2□□□□□ -1.1
UPF2-204ENST00000460569 PLA2G10O15496 165 aa8.2□□□□□ -1.1
UPF2-204ENST00000460569 TNFSF12O43508 249 aa8.2□□□□□ -1.1
UPF2-204ENST00000460569 PROP1O75360 226 aa8.2□□□□□ -1.1
UPF2-204ENST00000460569 IGLV2-14P01704 120 aa8.2□□□□□ -1.1
UPF2-204ENST00000460569 BRS3P32247 399 aa8.2□□□□□ -1.1
UPF2-204ENST00000460569 ECI1P42126 302 aa8.2□□□□□ -1.1
UPF2-204ENST00000460569 CCR6P51684 374 aa8.2□□□□□ -1.1
UPF2-204ENST00000460569 UCP3P55916 312 aa8.2□□□□□ -1.1
UPF2-204ENST00000460569 IFITM3Q01628 133 aa8.2□□□□□ -1.1
UPF2-204ENST00000460569 ASAH1Q13510 395 aa8.2□□□□□ -1.1
UPF2-204ENST00000460569 MSMO1Q15800 293 aa8.2□□□□□ -1.1
UPF2-204ENST00000460569 ABCA11PQ4W5N1 156 aa8.2□□□□□ -1.1
UPF2-204ENST00000460569 PHLDA2Q53GA4 152 aa8.2□□□□□ -1.1
UPF2-204ENST00000460569 LPCAT3Q6P1A2 487 aa8.2□□□□□ -1.1
UPF2-204ENST00000460569 GLDNQ6ZMI3 551 aaPredicted RBP8.2□□□□□ -1.1
UPF2-204ENST00000460569 SLC38A6Q8IZM9 456 aa8.2□□□□□ -1.1
UPF2-204ENST00000460569 OR13C8Q8NGS7 320 aa8.2□□□□□ -1.1
UPF2-204ENST00000460569 MRGPRFQ96AM1 343 aa8.2□□□□□ -1.1
UPF2-204ENST00000460569 GPHA2Q96T91 129 aa8.2□□□□□ -1.1
UPF2-204ENST00000460569 SSX3Q99909 188 aa8.2□□□□□ -1.1
UPF2-204ENST00000460569 NABP2Q9BQ15 211 aa8.2□□□□□ -1.1
UPF2-204ENST00000460569 RSRP1Q9BUV0 290 aa8.2□□□□□ -1.1
UPF2-204ENST00000460569 MEGF9Q9H1U4 602 aa8.2□□□□□ -1.1
UPF2-204ENST00000460569 TBC1D24Q9ULP9 559 aa8.2□□□□□ -1.1
UPF2-204ENST00000460569 GAB2Q9UQC2 676 aa8.2□□□□□ -1.1
UPF2-204ENST00000460569 C14orf166Q9Y224 244 aaKnown RBP8.2□□□□□ -1.1
UPF2-204ENST00000460569 BTBD17A6NE02 478 aa8.19□□□□□ -1.1
UPF2-204ENST00000460569 H3BUX3 64 aa8.19□□□□□ -1.1
UPF2-204ENST00000460569 APOA2P02652 100 aa8.19□□□□□ -1.1
UPF2-204ENST00000460569 RLN1P04808 185 aa8.19□□□□□ -1.1
UPF2-204ENST00000460569 CT45A6P0DMU7 189 aa8.19□□□□□ -1.1
UPF2-204ENST00000460569 CT45A5P0DMU8 189 aa8.19□□□□□ -1.1
UPF2-204ENST00000460569 CT45A7P0DMV0 189 aa8.19□□□□□ -1.1
UPF2-204ENST00000460569 PI3P19957 117 aa8.19□□□□□ -1.1
UPF2-204ENST00000460569 S100GP29377 79 aa8.19□□□□□ -1.1
UPF2-204ENST00000460569 GNRHRP30968 328 aa8.19□□□□□ -1.1
UPF2-204ENST00000460569 DUTP33316 252 aaKnown RBP8.19□□□□□ -1.1
UPF2-204ENST00000460569 BTCP35070 178 aa8.19□□□□□ -1.1
UPF2-204ENST00000460569 THBS3P49746 956 aa8.19□□□□□ -1.1
UPF2-204ENST00000460569 RAB13P51153 203 aa8.19□□□□□ -1.1
UPF2-204ENST00000460569 LINC00205P59089 165 aa8.19□□□□□ -1.1
UPF2-204ENST00000460569 DEFA1P59665 94 aa8.19□□□□□ -1.1
UPF2-204ENST00000460569 DEFA3P59666 94 aa8.19□□□□□ -1.1
UPF2-204ENST00000460569 CATR1Q13166 79 aa8.19□□□□□ -1.1
UPF2-204ENST00000460569 RBMS2Q15434 407 aaKnown RBP8.19□□□□□ -1.1
UPF2-204ENST00000460569 SURF2Q15527 256 aaPredicted RBP8.19□□□□□ -1.1
UPF2-204ENST00000460569 MZT2BQ6NZ67 158 aa8.19□□□□□ -1.1
UPF2-204ENST00000460569 Q6YL49 198 aa8.19□□□□□ -1.1
UPF2-204ENST00000460569 KCTD9Q7L273 389 aa8.19□□□□□ -1.1
UPF2-204ENST00000460569 CMTM1Q8IZ96 169 aa8.19□□□□□ -1.1
UPF2-204ENST00000460569 ZBTB34Q8NCN2 500 aa8.19□□□□□ -1.1
UPF2-204ENST00000460569 BVESQ8NE79 360 aa8.19□□□□□ -1.1
UPF2-204ENST00000460569 ZFAND1Q8TCF1 268 aa8.19□□□□□ -1.1
UPF2-204ENST00000460569 ZNF418Q8TF45 676 aaPredicted RBP8.19□□□□□ -1.1
UPF2-204ENST00000460569 TCTEX1D2Q8WW35 142 aa8.19□□□□□ -1.1
UPF2-204ENST00000460569 CAPSLQ8WWF8 208 aa8.19□□□□□ -1.1
UPF2-204ENST00000460569 CFHR4Q92496 578 aa8.19□□□□□ -1.1
UPF2-204ENST00000460569 ADTRPQ96IZ2 230 aa8.19□□□□□ -1.1
UPF2-204ENST00000460569 AKR1E2Q96JD6 320 aa8.19□□□□□ -1.1
UPF2-204ENST00000460569 SCGB3A2Q96PL1 93 aa8.19□□□□□ -1.1
UPF2-204ENST00000460569 HSD17B10Q99714 261 aaKnown RBP8.19□□□□□ -1.1
UPF2-204ENST00000460569 TNFRSF19Q9NS68 423 aa8.19□□□□□ -1.1
UPF2-204ENST00000460569 SVEP1Q4LDE5 3571 aa8.18□□□□□ -1.1
UPF2-204ENST00000460569 LINC00473A8K010 186 aa8.18□□□□□ -1.1
UPF2-204ENST00000460569 RNF212BA8MTL3 300 aa8.18□□□□□ -1.1
UPF2-204ENST00000460569 VGLL3A8MV65 326 aa8.18□□□□□ -1.1
UPF2-204ENST00000460569 H0YJW9 148 aa8.18□□□□□ -1.1
UPF2-204ENST00000460569 H7C2Y5 167 aa8.18□□□□□ -1.1
UPF2-204ENST00000460569 HOXA3O43365 443 aaPredicted RBP8.18□□□□□ -1.1
UPF2-204ENST00000460569 IGKV1D-33P01593 117 aa8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 67.3 ms