RNA–Protein interactions for RNA: ENST00000452162.5

PKP4-206, Transcript of plakophilin 4, humanhuman

TSL 1 (best)

Gene PKP4, Length 2,359 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-206ENST00000452162 MAP1AP78559 2803 aaPredicted RBP8.92□□□□□ -0.98
PKP4-206ENST00000452162 TMEM218A2RU14 115 aa8.92□□□□□ -0.98
PKP4-206ENST00000452162 ATP6V1G2-DDX39BF2Z307 99 aa8.92□□□□□ -0.98
PKP4-206ENST00000452162 SIGLEC5O15389 551 aa8.92□□□□□ -0.98
PKP4-206ENST00000452162 ZNF737O75373 536 aa8.92□□□□□ -0.98
PKP4-206ENST00000452162 CD3EP07766 207 aa8.92□□□□□ -0.98
PKP4-206ENST00000452162 SEC11BP0C7V7 166 aa8.92□□□□□ -0.98
PKP4-206ENST00000452162 SPP1P10451 314 aa8.92□□□□□ -0.98
PKP4-206ENST00000452162 IL2RGP31785 369 aa8.92□□□□□ -0.98
PKP4-206ENST00000452162 PRDX2P32119 198 aa8.92□□□□□ -0.98
PKP4-206ENST00000452162 GABRA2P47869 451 aa8.92□□□□□ -0.98
PKP4-206ENST00000452162 GLIPR1P48060 266 aa8.92□□□□□ -0.98
PKP4-206ENST00000452162 BLOC1S1P78537 153 aa8.92□□□□□ -0.98
PKP4-206ENST00000452162 EIF4EBP1Q13541 118 aaPredicted RBP8.92□□□□□ -0.98
PKP4-206ENST00000452162 KRBOX4Q5JUW0 171 aa8.92□□□□□ -0.98
PKP4-206ENST00000452162 BTNL8Q6UX41 500 aa8.92□□□□□ -0.98
PKP4-206ENST00000452162 TMEM108Q6UXF1 575 aa8.92□□□□□ -0.98
PKP4-206ENST00000452162 TMEM252Q8N6L7 170 aa8.92□□□□□ -0.98
PKP4-206ENST00000452162 OR52L2PQ8NGH6 319 aa8.92□□□□□ -0.98
PKP4-206ENST00000452162 C5orf30Q96GV9 206 aa8.92□□□□□ -0.98
PKP4-206ENST00000452162 MEGF10Q96KG7 1140 aa8.92□□□□□ -0.98
PKP4-206ENST00000452162 CREBBPQ92793 2442 aa8.92□□□□□ -0.98
PKP4-206ENST00000452162 IGKV1D-17A0A075B6S4 117 aa8.91□□□□□ -0.98
PKP4-206ENST00000452162 IGKV1-5P01602 117 aa8.91□□□□□ -0.98
PKP4-206ENST00000452162 APOC3P02656 99 aa8.91□□□□□ -0.98
PKP4-206ENST00000452162 EPHA1P21709 976 aa8.91□□□□□ -0.98
PKP4-206ENST00000452162 PTAFRP25105 342 aa8.91□□□□□ -0.98
PKP4-206ENST00000452162 CAV2P51636 162 aa8.91□□□□□ -0.98
PKP4-206ENST00000452162 PAX9P55771 341 aa8.91□□□□□ -0.98
PKP4-206ENST00000452162 VAMP2P63027 116 aa8.91□□□□□ -0.98
PKP4-206ENST00000452162 SRSF3P84103 164 aaKnown RBP8.91□□□□□ -0.98
PKP4-206ENST00000452162 FAM53AQ6NSI3 398 aaPredicted RBP8.91□□□□□ -0.98
PKP4-206ENST00000452162 Q6ZRM9 215 aa8.91□□□□□ -0.98
PKP4-206ENST00000452162 ZNF645Q8N7E2 425 aa8.91□□□□□ -0.98
PKP4-206ENST00000452162 OR13A1Q8NGR1 328 aa8.91□□□□□ -0.98
PKP4-206ENST00000452162 MRGPRDQ8TDS7 321 aa8.91□□□□□ -0.98
PKP4-206ENST00000452162 OR2V2Q96R30 315 aa8.91□□□□□ -0.98
PKP4-206ENST00000452162 SLC25A31Q9H0C2 315 aa8.91□□□□□ -0.98
PKP4-206ENST00000452162 HRH4Q9H3N8 390 aa8.91□□□□□ -0.98
PKP4-206ENST00000452162 SHISA9B4DS77 424 aa8.91□□□□□ -0.98
PKP4-206ENST00000452162 CHST1O43916 411 aa8.91□□□□□ -0.98
PKP4-206ENST00000452162 NXPH3O95157 252 aa8.91□□□□□ -0.98
PKP4-206ENST00000452162 AKR1C2P52895 323 aa8.91□□□□□ -0.98
PKP4-206ENST00000452162 RPS23P62266 143 aaKnown RBP8.91□□□□□ -0.98
PKP4-206ENST00000452162 AKR1C1Q04828 323 aa8.91□□□□□ -0.98
PKP4-206ENST00000452162 MSMO1Q15800 293 aa8.91□□□□□ -0.98
PKP4-206ENST00000452162 VHLLQ6RSH7 139 aa8.91□□□□□ -0.98
PKP4-206ENST00000452162 ATRAIDQ6UW56 229 aa8.91□□□□□ -0.98
PKP4-206ENST00000452162 Q6ZRG5 221 aa8.91□□□□□ -0.98
PKP4-206ENST00000452162 GCSAMQ8N6F7 178 aa8.91□□□□□ -0.98
PKP4-206ENST00000452162 ZBTB34Q8NCN2 500 aa8.91□□□□□ -0.98
PKP4-206ENST00000452162 LYPD6BQ8NI32 183 aa8.91□□□□□ -0.98
PKP4-206ENST00000452162 NARS2Q96I59 477 aaKnown RBP8.91□□□□□ -0.98
PKP4-206ENST00000452162 UBTD1Q9HAC8 227 aa8.91□□□□□ -0.98
PKP4-206ENST00000452162 FAM212BQ9NTI7 297 aaPredicted RBP8.91□□□□□ -0.98
PKP4-206ENST00000452162 RNF212BA8MTL3 300 aa8.9□□□□□ -0.98
PKP4-206ENST00000452162 C15orf65H3BRN8 121 aa8.9□□□□□ -0.98
PKP4-206ENST00000452162 DANCRP0C864 163 aa8.9□□□□□ -0.98
PKP4-206ENST00000452162 ADCYAP1P18509 176 aa8.9□□□□□ -0.98
PKP4-206ENST00000452162 SSTR5P35346 364 aa8.9□□□□□ -0.98
PKP4-206ENST00000452162 IZUMO4Q1ZYL8 232 aa8.9□□□□□ -0.98
PKP4-206ENST00000452162 MOGAT3Q86VF5 341 aa8.9□□□□□ -0.98
PKP4-206ENST00000452162 TPRX1Q8N7U7 411 aa8.9□□□□□ -0.98
PKP4-206ENST00000452162 MRPL37Q9BZE1 423 aaKnown RBP8.9□□□□□ -0.98
PKP4-206ENST00000452162 OR2D2Q9H210 308 aa8.9□□□□□ -0.98
PKP4-206ENST00000452162 SH3BGRL3Q9H299 93 aa8.9□□□□□ -0.98
PKP4-206ENST00000452162 VPS13CQ709C8 3753 aa8.9□□□□□ -0.98
PKP4-206ENST00000452162 AKAP9Q99996 3911 aa8.9□□□□□ -0.98
PKP4-206ENST00000452162 WRBO00258 174 aa8.9□□□□□ -0.99
PKP4-206ENST00000452162 SPRY3O43610 288 aa8.9□□□□□ -0.99
PKP4-206ENST00000452162 LHBP01229 141 aa8.9□□□□□ -0.99
PKP4-206ENST00000452162 ZNF16P17020 682 aaPredicted RBP8.9□□□□□ -0.99
PKP4-206ENST00000452162 GATA4P43694 442 aa8.9□□□□□ -0.99
PKP4-206ENST00000452162 F2RL1P55085 397 aa8.9□□□□□ -0.99
PKP4-206ENST00000452162 BAXQ07812 192 aa8.9□□□□□ -0.99
PKP4-206ENST00000452162 C10orf91Q5T1B1 145 aa8.9□□□□□ -0.99
PKP4-206ENST00000452162 TRAT1Q6PIZ9 186 aa8.9□□□□□ -0.99
PKP4-206ENST00000452162 ITLN1Q8WWA0 313 aa8.9□□□□□ -0.99
PKP4-206ENST00000452162 CACNG5Q9UF02 275 aa8.9□□□□□ -0.99
PKP4-206ENST00000452162 RNF150Q9ULK6 438 aa8.9□□□□□ -0.99
PKP4-206ENST00000452162 ARFGEF3Q5TH69 2177 aa8.89□□□□□ -0.99
PKP4-206ENST00000452162 KIAA2026Q5HYC2 2103 aa8.89□□□□□ -0.99
PKP4-206ENST00000452162 IGHV3OR15-7A0A075B7D8 119 aa8.89□□□□□ -0.99
PKP4-206ENST00000452162 TSPAN9O75954 239 aa8.89□□□□□ -0.99
PKP4-206ENST00000452162 CTRB1P17538 263 aa8.89□□□□□ -0.99
PKP4-206ENST00000452162 PPP1CCP36873 323 aaKnown RBP8.89□□□□□ -0.99
PKP4-206ENST00000452162 BTN1A1Q13410 526 aa8.89□□□□□ -0.99
PKP4-206ENST00000452162 CLINT1Q14677 625 aa8.89□□□□□ -0.99
PKP4-206ENST00000452162 ZNF672Q499Z4 452 aaPredicted RBP8.89□□□□□ -0.99
PKP4-206ENST00000452162 CTRB2Q6GPI1 263 aa8.89□□□□□ -0.99
PKP4-206ENST00000452162 SREK1IP1Q8N9Q2 155 aaPredicted RBP8.89□□□□□ -0.99
PKP4-206ENST00000452162 RNASE11Q8TAA1 199 aaKnown RBP8.89□□□□□ -0.99
PKP4-206ENST00000452162 DCTN5Q9BTE1 182 aa8.89□□□□□ -0.99
PKP4-206ENST00000452162 ATG12O94817 140 aa8.88□□□□□ -0.99
PKP4-206ENST00000452162 MUC1P15941 1255 aaPredicted RBP8.88□□□□□ -0.99
PKP4-206ENST00000452162 OMGP23515 440 aa8.88□□□□□ -0.99
PKP4-206ENST00000452162 DYNLT3P51808 116 aa8.88□□□□□ -0.99
PKP4-206ENST00000452162 RPL30P62888 115 aaKnown RBP8.88□□□□□ -0.99
PKP4-206ENST00000452162 HTD2P86397 168 aa8.88□□□□□ -0.99
PKP4-206ENST00000452162 ZNF266Q14584 549 aa8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 76.1 ms