RNA–Protein interactions for RNA: ENST00000425660.5

ACTB-204, Transcript of actin beta, humanhuman

TSL 1 (best)

Gene ACTB, Length 1,845 nt, Biotype nonsense mediated decay, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-204ENST00000425660 Q3ZCU0 254 aa12.51□□□□□ -0.41
ACTB-204ENST00000425660 TMEM155Q4W5P6 130 aa12.51□□□□□ -0.41
ACTB-204ENST00000425660 SLC51BQ86UW2 128 aa12.51□□□□□ -0.41
ACTB-204ENST00000425660 POMT1Q9Y6A1 747 aa12.51□□□□□ -0.41
ACTB-204ENST00000425660 A0A0G2JRQ6 117 aa12.5□□□□□ -0.41
ACTB-204ENST00000425660 LINC00473A8K010 186 aa12.5□□□□□ -0.41
ACTB-204ENST00000425660 SLC31A2O15432 143 aa12.5□□□□□ -0.41
ACTB-204ENST00000425660 KCNAB3O43448 404 aa12.5□□□□□ -0.41
ACTB-204ENST00000425660 BCL2L11O43521 198 aa12.5□□□□□ -0.41
ACTB-204ENST00000425660 RAMP3O60896 148 aa12.5□□□□□ -0.41
ACTB-204ENST00000425660 CFDP00746 253 aaPredicted RBP12.5□□□□□ -0.41
ACTB-204ENST00000425660 IGKV1-5P01602 117 aa12.5□□□□□ -0.41
ACTB-204ENST00000425660 RNF224P0DH78 156 aa12.5□□□□□ -0.41
ACTB-204ENST00000425660 ZNF16P17020 682 aaPredicted RBP12.5□□□□□ -0.41
ACTB-204ENST00000425660 DLX6P56179 175 aa12.5□□□□□ -0.41
ACTB-204ENST00000425660 ID3Q02535 119 aa12.5□□□□□ -0.41
ACTB-204ENST00000425660 PRAMEF5Q5TYX0 476 aa12.5□□□□□ -0.41
ACTB-204ENST00000425660 BTNL3Q6UXE8 466 aa12.5□□□□□ -0.41
ACTB-204ENST00000425660 SLC25A48Q6ZT89 311 aaKnown RBP12.5□□□□□ -0.41
ACTB-204ENST00000425660 CHODLQ9H9P2 273 aa12.5□□□□□ -0.41
ACTB-204ENST00000425660 MSGN1A6NI15 193 aa12.49□□□□□ -0.41
ACTB-204ENST00000425660 E5RGE8 158 aa12.49□□□□□ -0.41
ACTB-204ENST00000425660 RAB29O14966 203 aa12.49□□□□□ -0.41
ACTB-204ENST00000425660 LY6HO94772 140 aa12.49□□□□□ -0.41
ACTB-204ENST00000425660 IFNA7P01567 189 aa12.49□□□□□ -0.41
ACTB-204ENST00000425660 CCL3L1P16619 93 aa12.49□□□□□ -0.41
ACTB-204ENST00000425660 TMEM33P57088 247 aa12.49□□□□□ -0.41
ACTB-204ENST00000425660 THOC7Q6I9Y2 204 aaKnown RBP12.49□□□□□ -0.41
ACTB-204ENST00000425660 ODF3L1Q8IXM7 274 aa12.49□□□□□ -0.41
ACTB-204ENST00000425660 SPAG16Q8N0X2 631 aa12.49□□□□□ -0.41
ACTB-204ENST00000425660 CD300LFQ8TDQ1 290 aa12.49□□□□□ -0.41
ACTB-204ENST00000425660 TCTEX1D2Q8WW35 142 aa12.49□□□□□ -0.41
ACTB-204ENST00000425660 H1FXQ92522 213 aaKnown RBP12.49□□□□□ -0.41
ACTB-204ENST00000425660 RAB1CQ92928 201 aa12.49□□□□□ -0.41
ACTB-204ENST00000425660 LEAP2Q969E1 77 aa12.49□□□□□ -0.41
ACTB-204ENST00000425660 TIMD4Q96H15 378 aa12.49□□□□□ -0.41
ACTB-204ENST00000425660 ZNF251Q9BRH9 671 aa12.49□□□□□ -0.41
ACTB-204ENST00000425660 UBTD1Q9HAC8 227 aa12.49□□□□□ -0.41
ACTB-204ENST00000425660 RCL1Q9Y2P8 373 aaKnown RBP12.49□□□□□ -0.41
ACTB-204ENST00000425660 NSG2Q9Y328 171 aa12.49□□□□□ -0.41
ACTB-204ENST00000425660 UBR5O95071 2799 aaPredicted RBP12.49□□□□□ -0.41
ACTB-204ENST00000425660 MYO18BQ8IUG5 2567 aa12.49□□□□□ -0.41
ACTB-204ENST00000425660 KANTRA0A1W2PQU2 76 aa12.48□□□□□ -0.41
ACTB-204ENST00000425660 C17orf98A8MV24 154 aa12.48□□□□□ -0.41
ACTB-204ENST00000425660 SCGB1D2O95969 90 aa12.48□□□□□ -0.41
ACTB-204ENST00000425660 IGHV3-7P01780 117 aa12.48□□□□□ -0.41
ACTB-204ENST00000425660 P0C879 139 aa12.48□□□□□ -0.41
ACTB-204ENST00000425660 NFYBP25208 207 aa12.48□□□□□ -0.41
ACTB-204ENST00000425660 NKX2-1P43699 371 aaPredicted RBP12.48□□□□□ -0.41
ACTB-204ENST00000425660 EXOSC2Q13868 293 aaKnown RBP12.48□□□□□ -0.41
ACTB-204ENST00000425660 NDUFA5Q16718 116 aa12.48□□□□□ -0.41
ACTB-204ENST00000425660 FOXRED2Q8IWF2 684 aa12.48□□□□□ -0.41
ACTB-204ENST00000425660 C8orf31Q8N9H6 132 aa12.48□□□□□ -0.41
ACTB-204ENST00000425660 GPR146Q96CH1 333 aa12.48□□□□□ -0.41
ACTB-204ENST00000425660 SPOCK3Q9BQ16 436 aa12.48□□□□□ -0.41
ACTB-204ENST00000425660 C11orf1Q9H5F2 150 aa12.48□□□□□ -0.41
ACTB-204ENST00000425660 COA4Q9NYJ1 87 aa12.48□□□□□ -0.41
ACTB-204ENST00000425660 MIOXQ9UGB7 285 aa12.48□□□□□ -0.41
ACTB-204ENST00000425660 LSM5Q9Y4Y9 91 aaKnown RBP12.48□□□□□ -0.41
ACTB-204ENST00000425660 ARID1AO14497 2285 aa12.48□□□□□ -0.41
ACTB-204ENST00000425660 USF3Q68DE3 2245 aa12.48□□□□□ -0.41
ACTB-204ENST00000425660 A0A087X0M5 115 aa12.48□□□□□ -0.41
ACTB-204ENST00000425660 A0A1B0GX30 115 aa12.48□□□□□ -0.41
ACTB-204ENST00000425660 RBFOX2O43251 390 aaKnown RBP eCLIP12.48□□□□□ -0.413e-25■■■■■ 34.8
ACTB-204ENST00000425660 F12P00748 615 aaPredicted RBP12.48□□□□□ -0.41
ACTB-204ENST00000425660 HKR1P10072 659 aa12.48□□□□□ -0.41
ACTB-204ENST00000425660 NUP62P37198 522 aaPredicted RBP12.48□□□□□ -0.41
ACTB-204ENST00000425660 LPAR6P43657 344 aa12.48□□□□□ -0.41
ACTB-204ENST00000425660 NCR3LG1Q68D85 454 aa12.48□□□□□ -0.41
ACTB-204ENST00000425660 Q6ZRM9 215 aa12.48□□□□□ -0.41
ACTB-204ENST00000425660 DMBX1Q8NFW5 382 aa12.48□□□□□ -0.41
ACTB-204ENST00000425660 ARPC5LQ9BPX5 153 aa12.48□□□□□ -0.41
ACTB-204ENST00000425660 PLEKHA2Q9HB19 425 aa12.48□□□□□ -0.41
ACTB-204ENST00000425660 ITGB1BP2Q9UKP3 347 aa12.48□□□□□ -0.41
ACTB-204ENST00000425660 MMP24Q9Y5R2 645 aa12.48□□□□□ -0.41
ACTB-204ENST00000425660 SAA2-SAA4A0A096LPE2 208 aa12.47□□□□□ -0.41
ACTB-204ENST00000425660 KIAA1324LA8MWY0 1029 aaPredicted RBP12.47□□□□□ -0.41
ACTB-204ENST00000425660 OVOL3O00110 214 aa12.47□□□□□ -0.41
ACTB-204ENST00000425660 ATG12O94817 140 aa12.47□□□□□ -0.41
ACTB-204ENST00000425660 SAA2P0DJI9 122 aaPredicted RBP12.47□□□□□ -0.41
ACTB-204ENST00000425660 AKR1C2P52895 323 aa12.47□□□□□ -0.41
ACTB-204ENST00000425660 RPL39P5Q59GN2 51 aa12.47□□□□□ -0.41
ACTB-204ENST00000425660 CXorf66Q5JRM2 361 aaPredicted RBP12.47□□□□□ -0.41
ACTB-204ENST00000425660 AVPI1Q5T686 147 aa12.47□□□□□ -0.41
ACTB-204ENST00000425660 C1orf229Q6ZS94 237 aaPredicted RBP12.47□□□□□ -0.41
ACTB-204ENST00000425660 C11orf42Q8N5U0 333 aa12.47□□□□□ -0.41
ACTB-204ENST00000425660 C8orf46Q8TAG6 207 aa12.47□□□□□ -0.41
ACTB-204ENST00000425660 ZNF596Q8TC21 504 aa12.47□□□□□ -0.41
ACTB-204ENST00000425660 IGFBPL1Q8WX77 278 aa12.47□□□□□ -0.41
ACTB-204ENST00000425660 DDB2Q92466 427 aa12.47□□□□□ -0.41
ACTB-204ENST00000425660 RAB39BQ96DA2 213 aa12.47□□□□□ -0.41
ACTB-204ENST00000425660 M0R1X1 148 aa12.46□□□□□ -0.41
ACTB-204ENST00000425660 RPL12P30050 165 aaKnown RBP12.46□□□□□ -0.41
ACTB-204ENST00000425660 CDKN1AP38936 164 aa12.46□□□□□ -0.41
ACTB-204ENST00000425660 P2RY1P47900 373 aa12.46□□□□□ -0.41
ACTB-204ENST00000425660 LINC00205P59089 165 aa12.46□□□□□ -0.41
ACTB-204ENST00000425660 ERVFRD-1P60508 538 aa12.46□□□□□ -0.41
ACTB-204ENST00000425660 OR8B3Q8NGG8 313 aa12.46□□□□□ -0.41
ACTB-204ENST00000425660 NEIL1Q96FI4 390 aaPredicted RBP12.46□□□□□ -0.41
ACTB-204ENST00000425660 OR8B2Q96RD0 313 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms