RNA–Protein interactions for RNA: ENST00000403971.2

HMGB3P19-201, Transcript of high mobility group box 3 pseudogene 19, humanhuman

BASIC

Gene HMGB3P19, Length 560 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P19-201ENST00000403971 RANBP1P43487 201 aa3.47□□□□□ -1.85
HMGB3P19-201ENST00000403971 ZNF83P51522 516 aa3.47□□□□□ -1.85
HMGB3P19-201ENST00000403971 PSMD7P51665 324 aa3.47□□□□□ -1.85
HMGB3P19-201ENST00000403971 PPP1CBP62140 327 aa3.47□□□□□ -1.85
HMGB3P19-201ENST00000403971 RPS23P62266 143 aaKnown RBP3.47□□□□□ -1.85
HMGB3P19-201ENST00000403971 RPS25P62851 125 aaKnown RBP3.47□□□□□ -1.85
HMGB3P19-201ENST00000403971 FAM3AP98173 230 aa3.47□□□□□ -1.85
HMGB3P19-201ENST00000403971 FABP5Q01469 135 aa3.47□□□□□ -1.85
HMGB3P19-201ENST00000403971 RIPPLY1Q0D2K3 151 aa3.47□□□□□ -1.85
HMGB3P19-201ENST00000403971 OR8B8Q15620 311 aa3.47□□□□□ -1.85
HMGB3P19-201ENST00000403971 AANATQ16613 207 aa3.47□□□□□ -1.85
HMGB3P19-201ENST00000403971 HSD17B12Q53GQ0 312 aa3.47□□□□□ -1.85
HMGB3P19-201ENST00000403971 RSBN1Q5VWQ0 802 aaPredicted RBP3.47□□□□□ -1.85
HMGB3P19-201ENST00000403971 SLC25A24Q6NUK1 477 aa3.47□□□□□ -1.85
HMGB3P19-201ENST00000403971 CLEC18BQ6UXF7 455 aa3.47□□□□□ -1.85
HMGB3P19-201ENST00000403971 FBXW12Q6X9E4 464 aa3.47□□□□□ -1.85
HMGB3P19-201ENST00000403971 PGAP1Q75T13 922 aa3.47□□□□□ -1.85
HMGB3P19-201ENST00000403971 UTS2BQ765I0 119 aa3.47□□□□□ -1.85
HMGB3P19-201ENST00000403971 NAA40Q86UY6 237 aa3.47□□□□□ -1.85
HMGB3P19-201ENST00000403971 TPRA1Q86W33 373 aa3.47□□□□□ -1.85
HMGB3P19-201ENST00000403971 TGIF2LYQ8IUE0 185 aa3.47□□□□□ -1.85
HMGB3P19-201ENST00000403971 CDH26Q8IXH8 852 aa3.47□□□□□ -1.85
HMGB3P19-201ENST00000403971 ZNF101Q8IZC7 436 aa3.47□□□□□ -1.85
HMGB3P19-201ENST00000403971 FTMTQ8N4E7 242 aa3.47□□□□□ -1.85
HMGB3P19-201ENST00000403971 ACBD4Q8NC06 268 aa3.47□□□□□ -1.85
HMGB3P19-201ENST00000403971 OR5D14Q8NGL3 314 aa3.47□□□□□ -1.85
HMGB3P19-201ENST00000403971 OR51E1Q8TCB6 317 aa3.47□□□□□ -1.85
HMGB3P19-201ENST00000403971 PP6455Q8WZ26 134 aa3.47□□□□□ -1.85
HMGB3P19-201ENST00000403971 SLC7A6Q92536 515 aa3.47□□□□□ -1.85
HMGB3P19-201ENST00000403971 TMEM203Q969S6 136 aa3.47□□□□□ -1.85
HMGB3P19-201ENST00000403971 TMEM106AQ96A25 262 aa3.47□□□□□ -1.85
HMGB3P19-201ENST00000403971 C12orf43Q96C57 262 aaKnown RBP3.47□□□□□ -1.85
HMGB3P19-201ENST00000403971 C16orf74Q96GX8 76 aa3.47□□□□□ -1.85
HMGB3P19-201ENST00000403971 REEP6Q96HR9 211 aa3.47□□□□□ -1.85
HMGB3P19-201ENST00000403971 WFIKKN1Q96NZ8 548 aa3.47□□□□□ -1.85
HMGB3P19-201ENST00000403971 TECTBQ96PL2 329 aa3.47□□□□□ -1.85
HMGB3P19-201ENST00000403971 DERL3Q96Q80 235 aa3.47□□□□□ -1.85
HMGB3P19-201ENST00000403971 KCNS3Q9BQ31 491 aa3.47□□□□□ -1.85
HMGB3P19-201ENST00000403971 MED18Q9BUE0 208 aa3.47□□□□□ -1.85
HMGB3P19-201ENST00000403971 RNF126Q9BV68 326 aa3.47□□□□□ -1.85
HMGB3P19-201ENST00000403971 TMED9Q9BVK6 235 aa3.47□□□□□ -1.85
HMGB3P19-201ENST00000403971 NAA50Q9GZZ1 169 aaKnown RBP3.47□□□□□ -1.85
HMGB3P19-201ENST00000403971 OR51E2Q9H255 320 aa3.47□□□□□ -1.85
HMGB3P19-201ENST00000403971 EXOSC4Q9NPD3 245 aaKnown RBP3.47□□□□□ -1.85
HMGB3P19-201ENST00000403971 GPR84Q9NQS5 396 aa3.47□□□□□ -1.85
HMGB3P19-201ENST00000403971 TXNL4BQ9NX01 149 aaKnown RBP3.47□□□□□ -1.85
HMGB3P19-201ENST00000403971 ZNF221Q9UK13 617 aa3.47□□□□□ -1.85
HMGB3P19-201ENST00000403971 V9GYS6 101 aa3.47□□□□□ -1.85
HMGB3P19-201ENST00000403971 ARID1AO14497 2285 aa3.47□□□□□ -1.85
HMGB3P19-201ENST00000403971 LRRK2Q5S007 2527 aa3.47□□□□□ -1.85
HMGB3P19-201ENST00000403971 NKX2-6A6NCS4 301 aa3.46□□□□□ -1.86
HMGB3P19-201ENST00000403971 DPRXA6NFQ7 191 aa3.46□□□□□ -1.86
HMGB3P19-201ENST00000403971 CCDC160A6NGH7 325 aa3.46□□□□□ -1.86
HMGB3P19-201ENST00000403971 CD300LBA8K4G0 201 aa3.46□□□□□ -1.86
HMGB3P19-201ENST00000403971 IQCF6A8MYZ5 107 aa3.46□□□□□ -1.86
HMGB3P19-201ENST00000403971 G3V4G9 280 aa3.46□□□□□ -1.86
HMGB3P19-201ENST00000403971 M0R1B8 84 aa3.46□□□□□ -1.86
HMGB3P19-201ENST00000403971 PDCD5O14737 125 aa3.46□□□□□ -1.86
HMGB3P19-201ENST00000403971 PIN1P1O15428 100 aa3.46□□□□□ -1.86
HMGB3P19-201ENST00000403971 CST4P01036 141 aa3.46□□□□□ -1.86
HMGB3P19-201ENST00000403971 ALDOBP05062 364 aa3.46□□□□□ -1.86
HMGB3P19-201ENST00000403971 ERCC1P07992 297 aaPredicted RBP3.46□□□□□ -1.86
HMGB3P19-201ENST00000403971 CCL2P13500 99 aa3.46□□□□□ -1.86
HMGB3P19-201ENST00000403971 ZNF250P15622 560 aa3.46□□□□□ -1.86
HMGB3P19-201ENST00000403971 IGFBP3P17936 291 aaPredicted RBP3.46□□□□□ -1.86
HMGB3P19-201ENST00000403971 SRMP19623 302 aa3.46□□□□□ -1.86
HMGB3P19-201ENST00000403971 KITLGP21583 273 aa3.46□□□□□ -1.86
HMGB3P19-201ENST00000403971 MYL9P24844 172 aa3.46□□□□□ -1.86
HMGB3P19-201ENST00000403971 SOX6P35712 828 aa3.46□□□□□ -1.86
HMGB3P19-201ENST00000403971 EVX1P49640 407 aa3.46□□□□□ -1.86
HMGB3P19-201ENST00000403971 RIPPLY3P57055 190 aa3.46□□□□□ -1.86
HMGB3P19-201ENST00000403971 VBP1P61758 197 aa3.46□□□□□ -1.86
HMGB3P19-201ENST00000403971 NCS1P62166 190 aa3.46□□□□□ -1.86
HMGB3P19-201ENST00000403971 ZNF92Q03936 586 aa3.46□□□□□ -1.86
HMGB3P19-201ENST00000403971 DYNC1I2Q13409 638 aaKnown RBP3.46□□□□□ -1.86
HMGB3P19-201ENST00000403971 BEX5Q5H9J7 111 aa3.46□□□□□ -1.86
HMGB3P19-201ENST00000403971 GLYATL3Q5SZD4 288 aa3.46□□□□□ -1.86
HMGB3P19-201ENST00000403971 NCMAPQ5T1S8 102 aa3.46□□□□□ -1.86
HMGB3P19-201ENST00000403971 TMEM42Q69YG0 159 aa3.46□□□□□ -1.86
HMGB3P19-201ENST00000403971 C22orf42Q6IC83 251 aa3.46□□□□□ -1.86
HMGB3P19-201ENST00000403971 KCNIP4Q6PIL6 250 aa3.46□□□□□ -1.86
HMGB3P19-201ENST00000403971 LINC00299Q6ZSB3 139 aa3.46□□□□□ -1.86
HMGB3P19-201ENST00000403971 MRPL21Q7Z2W9 205 aaKnown RBP3.46□□□□□ -1.86
HMGB3P19-201ENST00000403971 SH2D6Q7Z4S9 175 aa3.46□□□□□ -1.86
HMGB3P19-201ENST00000403971 HSD17B13Q7Z5P4 300 aaPredicted RBP3.46□□□□□ -1.86
HMGB3P19-201ENST00000403971 RDH10Q8IZV5 341 aa3.46□□□□□ -1.86
HMGB3P19-201ENST00000403971 C14orf178Q8N769 122 aaPredicted RBP3.46□□□□□ -1.86
HMGB3P19-201ENST00000403971 C15orf54Q8N8G6 183 aa3.46□□□□□ -1.86
HMGB3P19-201ENST00000403971 OR51A4Q8NGJ6 313 aa3.46□□□□□ -1.86
HMGB3P19-201ENST00000403971 OR10AC1Q8NH08 325 aa3.46□□□□□ -1.86
HMGB3P19-201ENST00000403971 OR2AE1Q8NHA4 323 aa3.46□□□□□ -1.86
HMGB3P19-201ENST00000403971 DYNC2LI1Q8TCX1 351 aa3.46□□□□□ -1.86
HMGB3P19-201ENST00000403971 KLF14Q8TD94 323 aaPredicted RBP3.46□□□□□ -1.86
HMGB3P19-201ENST00000403971 TSEN15Q8WW01 171 aaKnown RBP3.46□□□□□ -1.86
HMGB3P19-201ENST00000403971 ADAT3Q96EY9 351 aaPredicted RBP3.46□□□□□ -1.86
HMGB3P19-201ENST00000403971 PHYHIPLQ96FC7 376 aa3.46□□□□□ -1.86
HMGB3P19-201ENST00000403971 CHST5Q9GZS9 411 aa3.46□□□□□ -1.86
HMGB3P19-201ENST00000403971 SLC22A4Q9H015 551 aa3.46□□□□□ -1.86
HMGB3P19-201ENST00000403971 DCSTAMPQ9H295 470 aa3.46□□□□□ -1.86
HMGB3P19-201ENST00000403971 ZNF442Q9H7R0 627 aa3.46□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms