RNA–Protein interactions for RNA: ENST00000375254.7

UBR4-204, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBR4, Length 15,906 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-204ENST00000375254 NKX2-2O95096 273 aa5.74□□□□□ -1.49
UBR4-204ENST00000375254 RPL31P62899 125 aaKnown RBP5.74□□□□□ -1.49
UBR4-204ENST00000375254 TMEM30BQ3MIR4 351 aa5.74□□□□□ -1.49
UBR4-204ENST00000375254 MEIG1Q5JSS6 88 aa5.74□□□□□ -1.49
UBR4-204ENST00000375254 RASL11BQ9BPW5 248 aa5.74□□□□□ -1.49
UBR4-204ENST00000375254 PLPP3O14495 311 aa5.74□□□□□ -1.49
UBR4-204ENST00000375254 KLRC4-KLRK1H3BQV0 150 aa5.74□□□□□ -1.49
UBR4-204ENST00000375254 TNFRSF4P43489 277 aa5.74□□□□□ -1.49
UBR4-204ENST00000375254 CTHRC1Q96CG8 243 aa5.74□□□□□ -1.49
UBR4-204ENST00000375254 Q6ZSR6 202 aa5.73□□□□□ -1.49
UBR4-204ENST00000375254 PPP1R27Q86WC6 154 aa5.73□□□□□ -1.49
UBR4-204ENST00000375254 PRRC2BQ5JSZ5 2229 aaKnown RBP5.73□□□□□ -1.49
UBR4-204ENST00000375254 A0A0U1RQV5 110 aa5.73□□□□□ -1.49
UBR4-204ENST00000375254 FAM234AQ9H0X4 552 aa5.73□□□□□ -1.49
UBR4-204ENST00000375254 VSIG8P0DPA2 414 aa5.73□□□□□ -1.49
UBR4-204ENST00000375254 TMEM187Q14656 261 aa5.73□□□□□ -1.49
UBR4-204ENST00000375254 ZNF740Q8NDX6 193 aa5.73□□□□□ -1.49
UBR4-204ENST00000375254 A6NNC1 897 aa5.73□□□□□ -1.49
UBR4-204ENST00000375254 WFDC6Q9BQY6 131 aa5.73□□□□□ -1.49
UBR4-204ENST00000375254 HIGD1AQ9Y241 93 aa5.73□□□□□ -1.49
UBR4-204ENST00000375254 CUL7Q14999 1698 aa5.73□□□□□ -1.49
UBR4-204ENST00000375254 FAM231BA6NCW3 169 aa5.73□□□□□ -1.49
UBR4-204ENST00000375254 INAFM2P0DMQ5 153 aa5.73□□□□□ -1.49
UBR4-204ENST00000375254 TDGF1P13385 188 aa5.73□□□□□ -1.49
UBR4-204ENST00000375254 SPSB2Q99619 263 aa5.73□□□□□ -1.49
UBR4-204ENST00000375254 CD46P15529 392 aa5.73□□□□□ -1.49
UBR4-204ENST00000375254 PRSS8Q16651 343 aa5.73□□□□□ -1.49
UBR4-204ENST00000375254 GFI1BQ5VTD9 330 aa5.73□□□□□ -1.49
UBR4-204ENST00000375254 SLC25A48Q6ZT89 311 aaKnown RBP5.73□□□□□ -1.49
UBR4-204ENST00000375254 C1QTNF4Q9BXJ3 329 aa5.73□□□□□ -1.49
UBR4-204ENST00000375254 HEATR1Q9H583 2144 aaKnown RBP5.73□□□□□ -1.49
UBR4-204ENST00000375254 IFNL4K9M1U5 179 aa5.73□□□□□ -1.49
UBR4-204ENST00000375254 C1QAP02745 245 aa5.73□□□□□ -1.49
UBR4-204ENST00000375254 GCHFRP30047 84 aa5.73□□□□□ -1.49
UBR4-204ENST00000375254 SOCS1O15524 211 aa5.73□□□□□ -1.49
UBR4-204ENST00000375254 PLAUP00749 431 aa5.73□□□□□ -1.49
UBR4-204ENST00000375254 IFI6P09912 130 aa5.73□□□□□ -1.49
UBR4-204ENST00000375254 HOXB2P14652 356 aa5.73□□□□□ -1.49
UBR4-204ENST00000375254 TMEM52BQ4KMG9 183 aa5.73□□□□□ -1.49
UBR4-204ENST00000375254 PRNTQ86SH4 94 aa5.73□□□□□ -1.49
UBR4-204ENST00000375254 TSKUQ8WUA8 353 aa5.73□□□□□ -1.49
UBR4-204ENST00000375254 RNF181Q9P0P0 153 aa5.73□□□□□ -1.49
UBR4-204ENST00000375254 MRPS18BQ9Y676 258 aaKnown RBP5.73□□□□□ -1.49
UBR4-204ENST00000375254 MADDQ8WXG6 1647 aa5.73□□□□□ -1.49
UBR4-204ENST00000375254 MAST1Q9Y2H9 1570 aa5.73□□□□□ -1.49
UBR4-204ENST00000375254 CREBBPQ92793 2442 aa5.73□□□□□ -1.49
UBR4-204ENST00000375254 PPP1CCP36873 323 aaKnown RBP5.73□□□□□ -1.49
UBR4-204ENST00000375254 RPL23P62829 140 aaKnown RBP5.73□□□□□ -1.49
UBR4-204ENST00000375254 NAT6Q93015 286 aa5.73□□□□□ -1.49
UBR4-204ENST00000375254 CYBAP13498 195 aa5.73□□□□□ -1.49
UBR4-204ENST00000375254 CCL23P55773 120 aa5.73□□□□□ -1.49
UBR4-204ENST00000375254 CXorf66Q5JRM2 361 aaPredicted RBP5.73□□□□□ -1.49
UBR4-204ENST00000375254 HIGD1CA8MV81 97 aa5.73□□□□□ -1.49
UBR4-204ENST00000375254 UNQ5815/PRO19632Q6UWF5 114 aa5.73□□□□□ -1.49
UBR4-204ENST00000375254 GNB4Q9HAV0 340 aa5.73□□□□□ -1.49
UBR4-204ENST00000375254 CCL27Q9Y4X3 112 aa5.73□□□□□ -1.49
UBR4-204ENST00000375254 KCNE3Q9Y6H6 103 aa5.73□□□□□ -1.49
UBR4-204ENST00000375254 F2Z2F3 143 aa5.73□□□□□ -1.49
UBR4-204ENST00000375254 ICAM4Q14773 271 aa5.73□□□□□ -1.49
UBR4-204ENST00000375254 ZNF750Q32MQ0 723 aa5.73□□□□□ -1.49
UBR4-204ENST00000375254 OR5P3Q8WZ94 311 aa5.73□□□□□ -1.49
UBR4-204ENST00000375254 TMEM140Q9NV12 185 aa5.73□□□□□ -1.49
UBR4-204ENST00000375254 RBMY1BA6NDE4 496 aaKnown RBP5.72□□□□□ -1.49
UBR4-204ENST00000375254 RBMY1EA6NEQ0 496 aaKnown RBP5.72□□□□□ -1.49
UBR4-204ENST00000375254 OR2H2O95918 312 aa5.72□□□□□ -1.49
UBR4-204ENST00000375254 NGFRP08138 427 aa5.72□□□□□ -1.49
UBR4-204ENST00000375254 RBMY1DP0C7P1 496 aaKnown RBP5.72□□□□□ -1.49
UBR4-204ENST00000375254 RBMY1A1P0DJD3 496 aaKnown RBP5.72□□□□□ -1.49
UBR4-204ENST00000375254 RBMY1CP0DJD4 496 aa5.72□□□□□ -1.49
UBR4-204ENST00000375254 DNAJB12Q9NXW2 375 aaKnown RBP5.72□□□□□ -1.49
UBR4-204ENST00000375254 V9GYY9 64 aa5.72□□□□□ -1.49
UBR4-204ENST00000375254 CEACAM18A8MTB9 384 aa5.72□□□□□ -1.49
UBR4-204ENST00000375254 FCGR3BO75015 233 aa5.72□□□□□ -1.49
UBR4-204ENST00000375254 OR8B12Q8NGG6 310 aa5.72□□□□□ -1.49
UBR4-204ENST00000375254 DYNLRB2Q8TF09 96 aa5.72□□□□□ -1.49
UBR4-204ENST00000375254 SF3B5Q9BWJ5 86 aaKnown RBP5.72□□□□□ -1.49
UBR4-204ENST00000375254 ADGRB1O14514 1584 aa5.72□□□□□ -1.49
UBR4-204ENST00000375254 A0A0G2JLL6 359 aaPredicted RBP5.72□□□□□ -1.49
UBR4-204ENST00000375254 CLDN14O95500 239 aa5.72□□□□□ -1.49
UBR4-204ENST00000375254 APOHP02749 345 aaPredicted RBP5.72□□□□□ -1.49
UBR4-204ENST00000375254 FAM53AQ6NSI3 398 aaPredicted RBP5.72□□□□□ -1.49
UBR4-204ENST00000375254 PRRT2Q7Z6L0 340 aaPredicted RBP5.72□□□□□ -1.49
UBR4-204ENST00000375254 COQ2Q96H96 371 aa5.72□□□□□ -1.49
UBR4-204ENST00000375254 TM4SF1P30408 202 aa5.72□□□□□ -1.49
UBR4-204ENST00000375254 TMEM25Q86YD3 366 aa5.72□□□□□ -1.49
UBR4-204ENST00000375254 ZNF688P0C7X2 276 aa5.72□□□□□ -1.49
UBR4-204ENST00000375254 ID1P41134 155 aa5.72□□□□□ -1.49
UBR4-204ENST00000375254 KIRREL2Q6UWL6 708 aa5.72□□□□□ -1.49
UBR4-204ENST00000375254 OR4D11Q8NGI4 311 aa5.72□□□□□ -1.49
UBR4-204ENST00000375254 CC2D2AQ9P2K1 1620 aa5.72□□□□□ -1.49
UBR4-204ENST00000375254 C2orf82Q6UX34 121 aa5.72□□□□□ -1.49
UBR4-204ENST00000375254 INSM2Q96T92 566 aaPredicted RBP5.72□□□□□ -1.49
UBR4-204ENST00000375254 SIRT4Q9Y6E7 314 aaPredicted RBP5.72□□□□□ -1.49
UBR4-204ENST00000375254 ABCC6O95255 1503 aa5.72□□□□□ -1.49
UBR4-204ENST00000375254 H3BNC9 293 aa5.72□□□□□ -1.49
UBR4-204ENST00000375254 NRG2O14511 850 aaPredicted RBP5.72□□□□□ -1.49
UBR4-204ENST00000375254 KCNK17Q96T54 332 aa5.72□□□□□ -1.49
UBR4-204ENST00000375254 PPIL1Q9Y3C6 166 aa5.72□□□□□ -1.49
UBR4-204ENST00000375254 NGFP01138 241 aa5.72□□□□□ -1.49
UBR4-204ENST00000375254 B4GALNT1Q00973 533 aa5.72□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 109.6 ms