RNA–Protein interactions for RNA: ENST00000359902.2

CCDC88B-203, Transcript of coiled-coil domain containing 88B, humanhuman

TSL 1 (best) BASIC

Gene CCDC88B, Length 2,326 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC88B-203ENST00000359902 IGKV1D-17A0A075B6S4 117 aa17.38■□□□□ 0.37
CCDC88B-203ENST00000359902 LRRC30A6NM36 301 aa17.38■□□□□ 0.37
CCDC88B-203ENST00000359902 DEFB108AA8MXU0 73 aa17.38■□□□□ 0.37
CCDC88B-203ENST00000359902 SRRM5B3KS81 715 aa17.38■□□□□ 0.37
CCDC88B-203ENST00000359902 RAB2AP61019 212 aa17.38■□□□□ 0.37
CCDC88B-203ENST00000359902 TIMM23BQ5SRD1 257 aa17.38■□□□□ 0.37
CCDC88B-203ENST00000359902 TMEM14EPQ6UXP3 125 aa17.38■□□□□ 0.37
CCDC88B-203ENST00000359902 ZFP82Q8N141 532 aa17.38■□□□□ 0.37
CCDC88B-203ENST00000359902 LILRB2Q8N423 598 aa17.38■□□□□ 0.37
CCDC88B-203ENST00000359902 AGMATQ9BSE5 352 aa17.38■□□□□ 0.37
CCDC88B-203ENST00000359902 VSIRQ9H7M9 311 aa17.38■□□□□ 0.37
CCDC88B-203ENST00000359902 ODAMA1E959 279 aa17.37■□□□□ 0.37
CCDC88B-203ENST00000359902 M0R1B8 84 aa17.37■□□□□ 0.37
CCDC88B-203ENST00000359902 LINC00205P59089 165 aa17.37■□□□□ 0.37
CCDC88B-203ENST00000359902 HTD2P86397 168 aa17.37■□□□□ 0.37
CCDC88B-203ENST00000359902 EDDM3AQ14507 147 aa17.37■□□□□ 0.37
CCDC88B-203ENST00000359902 RTP5Q14D33 572 aa17.37■□□□□ 0.37
CCDC88B-203ENST00000359902 CTNNBIP1Q9NSA3 81 aaPredicted RBP17.37■□□□□ 0.37
CCDC88B-203ENST00000359902 WASF3Q9UPY6 502 aa17.37■□□□□ 0.37
CCDC88B-203ENST00000359902 LINC00473A8K010 186 aa17.37■□□□□ 0.37
CCDC88B-203ENST00000359902 SPINT2O43291 252 aa17.37■□□□□ 0.37
CCDC88B-203ENST00000359902 MT-ND4LP03901 98 aa17.37■□□□□ 0.37
CCDC88B-203ENST00000359902 HSPB1P04792 205 aaKnown RBP17.37■□□□□ 0.37
CCDC88B-203ENST00000359902 FBP1P09467 338 aa17.37■□□□□ 0.37
CCDC88B-203ENST00000359902 SPRNQ5BIV9 151 aa17.37■□□□□ 0.37
CCDC88B-203ENST00000359902 TCTEX1D1Q8N7M0 179 aa17.37■□□□□ 0.37
CCDC88B-203ENST00000359902 C2CD4CQ8TF44 421 aa17.37■□□□□ 0.37
CCDC88B-203ENST00000359902 PARD6GQ9BYG4 376 aaPredicted RBP17.37■□□□□ 0.37
CCDC88B-203ENST00000359902 WDR61Q9GZS3 305 aaKnown RBP17.37■□□□□ 0.37
CCDC88B-203ENST00000359902 UNKLQ9H9P5 680 aaKnown RBP17.37■□□□□ 0.37
CCDC88B-203ENST00000359902 BIN3Q9NQY0 253 aa17.37■□□□□ 0.37
CCDC88B-203ENST00000359902 PSG11Q9UQ72 335 aa17.37■□□□□ 0.37
CCDC88B-203ENST00000359902 ST8SIA5O15466 376 aa17.36■□□□□ 0.37
CCDC88B-203ENST00000359902 IGHV3-13P01766 116 aa17.36■□□□□ 0.37
CCDC88B-203ENST00000359902 CFHR2P36980 270 aa17.36■□□□□ 0.37
CCDC88B-203ENST00000359902 TCF15Q12870 199 aa17.36■□□□□ 0.37
CCDC88B-203ENST00000359902 TRAT1Q6PIZ9 186 aa17.36■□□□□ 0.37
CCDC88B-203ENST00000359902 ZNF66Q6ZN08 573 aa17.36■□□□□ 0.37
CCDC88B-203ENST00000359902 CLDN14O95500 239 aa17.36■□□□□ 0.37
CCDC88B-203ENST00000359902 ADH4P08319 380 aa17.36■□□□□ 0.37
CCDC88B-203ENST00000359902 SLC38A11Q08AI6 406 aa17.36■□□□□ 0.37
CCDC88B-203ENST00000359902 HABP2Q14520 560 aaPredicted RBP17.36■□□□□ 0.37
CCDC88B-203ENST00000359902 RNF212Q495C1 297 aa17.36■□□□□ 0.37
CCDC88B-203ENST00000359902 GCSAMQ8N6F7 178 aa17.36■□□□□ 0.37
CCDC88B-203ENST00000359902 A0A1W2PPH5 198 aa17.35■□□□□ 0.37
CCDC88B-203ENST00000359902 TM4SF5O14894 197 aa17.35■□□□□ 0.37
CCDC88B-203ENST00000359902 ARG1P05089 322 aa17.35■□□□□ 0.37
CCDC88B-203ENST00000359902 SERF2P84101 59 aa17.35■□□□□ 0.37
CCDC88B-203ENST00000359902 ZNF726P1Q15940 193 aa17.35■□□□□ 0.37
CCDC88B-203ENST00000359902 Q3ZCU0 254 aa17.35■□□□□ 0.37
CCDC88B-203ENST00000359902 C1orf185Q5T7R7 199 aa17.35■□□□□ 0.37
CCDC88B-203ENST00000359902 OR8G2PQ6IF36 304 aa17.35■□□□□ 0.37
CCDC88B-203ENST00000359902 FAM90A1Q86YD7 464 aa17.35■□□□□ 0.37
CCDC88B-203ENST00000359902 CYB561D1Q8N8Q1 229 aa17.35■□□□□ 0.37
CCDC88B-203ENST00000359902 HSD17B10Q99714 261 aaKnown RBP17.35■□□□□ 0.37
CCDC88B-203ENST00000359902 BOD1L1Q8NFC6 3051 aa17.35■□□□□ 0.37
CCDC88B-203ENST00000359902 H3BQ15 152 aa17.35■□□□□ 0.37
CCDC88B-203ENST00000359902 K7EM74 188 aa17.35■□□□□ 0.37
CCDC88B-203ENST00000359902 RAB29O14966 203 aa17.35■□□□□ 0.37
CCDC88B-203ENST00000359902 KHDC3LQ587J8 217 aa17.35■□□□□ 0.37
CCDC88B-203ENST00000359902 MBD3L1Q8WWY6 194 aa17.35■□□□□ 0.37
CCDC88B-203ENST00000359902 OR2V2Q96R30 315 aa17.35■□□□□ 0.37
CCDC88B-203ENST00000359902 CLN8Q9UBY8 286 aa17.35■□□□□ 0.37
CCDC88B-203ENST00000359902 IGHV3OR15-7A0A075B7D8 119 aa17.34■□□□□ 0.37
CCDC88B-203ENST00000359902 A0A1W2PPE2 198 aa17.34■□□□□ 0.37
CCDC88B-203ENST00000359902 CRYAAP02489 173 aa17.34■□□□□ 0.37
CCDC88B-203ENST00000359902 GZMHP20718 246 aa17.34■□□□□ 0.37
CCDC88B-203ENST00000359902 PTAFRP25105 342 aa17.34■□□□□ 0.37
CCDC88B-203ENST00000359902 GLRXP35754 106 aa17.34■□□□□ 0.37
CCDC88B-203ENST00000359902 CEBPGP53567 150 aa17.34■□□□□ 0.37
CCDC88B-203ENST00000359902 NKX6-1P78426 367 aaPredicted RBP17.34■□□□□ 0.37
CCDC88B-203ENST00000359902 LTC4SQ16873 150 aa17.34■□□□□ 0.37
CCDC88B-203ENST00000359902 RBMXL3Q8N7X1 1067 aaKnown RBP17.34■□□□□ 0.37
CCDC88B-203ENST00000359902 TAF15Q92804 592 aaKnown RBP eCLIP17.34■□□□□ 0.37
CCDC88B-203ENST00000359902 SEBOXQ9HB31 216 aaPredicted RBP17.34■□□□□ 0.37
CCDC88B-203ENST00000359902 EIF2S3LQ2VIR3 472 aaKnown RBP17.33■□□□□ 0.37
CCDC88B-203ENST00000359902 SNX22Q96L94 193 aa17.33■□□□□ 0.37
CCDC88B-203ENST00000359902 ZNF292O60281 2723 aa17.33■□□□□ 0.37
CCDC88B-203ENST00000359902 LOC102723971A0A1B0GUV8 181 aa17.33■□□□□ 0.36
CCDC88B-203ENST00000359902 PROP1O75360 226 aa17.33■□□□□ 0.36
CCDC88B-203ENST00000359902 CD55P08174 381 aa17.33■□□□□ 0.36
CCDC88B-203ENST00000359902 TIMP3P35625 211 aa17.33■□□□□ 0.36
CCDC88B-203ENST00000359902 KLF3P57682 345 aaPredicted RBP17.33■□□□□ 0.36
CCDC88B-203ENST00000359902 RAB5BP61020 215 aa17.33■□□□□ 0.36
CCDC88B-203ENST00000359902 CR1LQ2VPA4 569 aa17.33■□□□□ 0.36
CCDC88B-203ENST00000359902 C3orf36Q3SXR2 165 aa17.33■□□□□ 0.36
CCDC88B-203ENST00000359902 SSX7Q7RTT5 188 aa17.33■□□□□ 0.36
CCDC88B-203ENST00000359902 H2BFWTQ7Z2G1 175 aa17.33■□□□□ 0.36
CCDC88B-203ENST00000359902 MEGF10Q96KG7 1140 aa17.33■□□□□ 0.36
CCDC88B-203ENST00000359902 GNG13Q9P2W3 67 aa17.33■□□□□ 0.36
CCDC88B-203ENST00000359902 UBE2L5PA0A1B0GUS4 154 aa17.32■□□□□ 0.36
CCDC88B-203ENST00000359902 MGST3O14880 152 aa17.32■□□□□ 0.36
CCDC88B-203ENST00000359902 VHLLQ6RSH7 139 aa17.32■□□□□ 0.36
CCDC88B-203ENST00000359902 LCN15Q6UWW0 184 aa17.32■□□□□ 0.36
CCDC88B-203ENST00000359902 ZNF429Q86V71 674 aa17.32■□□□□ 0.36
CCDC88B-203ENST00000359902 MOGAT3Q86VF5 341 aa17.32■□□□□ 0.36
CCDC88B-203ENST00000359902 FAM24BQ8N5W8 94 aa17.32■□□□□ 0.36
CCDC88B-203ENST00000359902 MUCL1Q96DR8 90 aa17.32■□□□□ 0.36
CCDC88B-203ENST00000359902 RCC1LQ96I51 464 aaKnown RBP17.32■□□□□ 0.36
CCDC88B-203ENST00000359902 LAMP3Q9UQV4 416 aa17.32■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms