RNA–Protein interactions for RNA: ENST00000336300.9

MRPL55-202, Transcript of mitochondrial ribosomal protein L55, humanhuman

APPRIS P1 TSL 2 BASIC

Gene MRPL55, Length 722 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-202ENST00000336300 CT45A7P0DMV0 189 aa12.59□□□□□ -0.39
MRPL55-202ENST00000336300 LUMP51884 338 aaPredicted RBP12.59□□□□□ -0.39
MRPL55-202ENST00000336300 GVQW1Q8N7I0 195 aa12.59□□□□□ -0.39
MRPL55-202ENST00000336300 C5orf56Q8N8D9 126 aa12.59□□□□□ -0.39
MRPL55-202ENST00000336300 SGMS2Q8NHU3 365 aa12.59□□□□□ -0.39
MRPL55-202ENST00000336300 OR2D2Q9H210 308 aa12.59□□□□□ -0.39
MRPL55-202ENST00000336300 CCDC59Q9P031 241 aaKnown RBP12.59□□□□□ -0.39
MRPL55-202ENST00000336300 OR2W1Q9Y3N9 320 aa12.59□□□□□ -0.39
MRPL55-202ENST00000336300 H3BMQ9 156 aa12.58□□□□□ -0.4
MRPL55-202ENST00000336300 APOA2P02652 100 aa12.58□□□□□ -0.4
MRPL55-202ENST00000336300 PTHLHP12272 177 aa12.58□□□□□ -0.4
MRPL55-202ENST00000336300 NFYAP23511 347 aaPredicted RBP12.58□□□□□ -0.4
MRPL55-202ENST00000336300 TAGLNQ01995 201 aaKnown RBP12.58□□□□□ -0.4
MRPL55-202ENST00000336300 CBX3Q13185 183 aa12.58□□□□□ -0.4
MRPL55-202ENST00000336300 MMDQ15546 238 aa12.58□□□□□ -0.4
MRPL55-202ENST00000336300 FBLN7Q53RD9 439 aa12.58□□□□□ -0.4
MRPL55-202ENST00000336300 Q8N6K4 173 aa12.58□□□□□ -0.4
MRPL55-202ENST00000336300 KLHDC1Q8N7A1 406 aa12.58□□□□□ -0.4
MRPL55-202ENST00000336300 OR5AP2Q8NGF4 316 aa12.58□□□□□ -0.4
MRPL55-202ENST00000336300 DYNC2LI1Q8TCX1 351 aa12.58□□□□□ -0.4
MRPL55-202ENST00000336300 SCPEP1Q9HB40 452 aa12.58□□□□□ -0.4
MRPL55-202ENST00000336300 KIAA1456Q9P272 454 aa12.58□□□□□ -0.4
MRPL55-202ENST00000336300 WASHC3Q9Y3C0 194 aa12.58□□□□□ -0.4
MRPL55-202ENST00000336300 MEIS3P1A6NDR6 274 aa12.57□□□□□ -0.4
MRPL55-202ENST00000336300 M0R1X1 148 aa12.57□□□□□ -0.4
MRPL55-202ENST00000336300 SULT1C2O00338 296 aa12.57□□□□□ -0.4
MRPL55-202ENST00000336300 RBBP9O75884 186 aa12.57□□□□□ -0.4
MRPL55-202ENST00000336300 TPPPO94811 219 aa12.57□□□□□ -0.4
MRPL55-202ENST00000336300 HLA-DQB1P01920 261 aa12.57□□□□□ -0.4
MRPL55-202ENST00000336300 AMY1AP04745 511 aa12.57□□□□□ -0.4
MRPL55-202ENST00000336300 AMY2AP04746 511 aa12.57□□□□□ -0.4
MRPL55-202ENST00000336300 ACTBP60709 375 aa12.57□□□□□ -0.4
MRPL55-202ENST00000336300 Q6ZS46 218 aa12.57□□□□□ -0.4
MRPL55-202ENST00000336300 CENPVQ7Z7K6 275 aaPredicted RBP12.57□□□□□ -0.4
MRPL55-202ENST00000336300 SNX29P2Q8IUI4 249 aa12.57□□□□□ -0.4
MRPL55-202ENST00000336300 OR5AN1Q8NGI8 311 aa12.57□□□□□ -0.4
MRPL55-202ENST00000336300 RNF5Q99942 180 aa12.57□□□□□ -0.4
MRPL55-202ENST00000336300 CITED1Q99966 193 aa12.57□□□□□ -0.4
MRPL55-202ENST00000336300 SERTAD4Q9NUC0 356 aa12.57□□□□□ -0.4
MRPL55-202ENST00000336300 LIN7CQ9NUP9 197 aaKnown RBP12.57□□□□□ -0.4
MRPL55-202ENST00000336300 SDHAF2Q9NX18 166 aa12.57□□□□□ -0.4
MRPL55-202ENST00000336300 EXTL2Q9UBQ6 330 aa12.57□□□□□ -0.4
MRPL55-202ENST00000336300 CEPT1Q9Y6K0 416 aa12.57□□□□□ -0.4
MRPL55-202ENST00000336300 H0YJW9 148 aa12.56□□□□□ -0.4
MRPL55-202ENST00000336300 J3QRK9 145 aa12.56□□□□□ -0.4
MRPL55-202ENST00000336300 FCER2P06734 321 aa12.56□□□□□ -0.4
MRPL55-202ENST00000336300 OR5H8P0DN80 308 aa12.56□□□□□ -0.4
MRPL55-202ENST00000336300 F2RL1P55085 397 aa12.56□□□□□ -0.4
MRPL55-202ENST00000336300 TAS2R46P59540 309 aa12.56□□□□□ -0.4
MRPL55-202ENST00000336300 CDK10Q15131 360 aa12.56□□□□□ -0.4
MRPL55-202ENST00000336300 FAM131AQ6UXB0 335 aa12.56□□□□□ -0.4
MRPL55-202ENST00000336300 GLDNQ6ZMI3 551 aaPredicted RBP12.56□□□□□ -0.4
MRPL55-202ENST00000336300 FOXRED2Q8IWF2 684 aa12.56□□□□□ -0.4
MRPL55-202ENST00000336300 ZNF645Q8N7E2 425 aa12.56□□□□□ -0.4
MRPL55-202ENST00000336300 DRAXINQ8NBI3 349 aaPredicted RBP12.56□□□□□ -0.4
MRPL55-202ENST00000336300 ADTRPQ96IZ2 230 aa12.56□□□□□ -0.4
MRPL55-202ENST00000336300 RSL24D1Q9UHA3 163 aaKnown RBP12.56□□□□□ -0.4
MRPL55-202ENST00000336300 SH2D7A6NKC9 451 aaPredicted RBP12.55□□□□□ -0.4
MRPL55-202ENST00000336300 NBR2O15453 112 aa12.55□□□□□ -0.4
MRPL55-202ENST00000336300 KCNAB3O43448 404 aa12.55□□□□□ -0.4
MRPL55-202ENST00000336300 RRASP10301 218 aa12.55□□□□□ -0.4
MRPL55-202ENST00000336300 FCGR2CP31995 323 aa12.55□□□□□ -0.4
MRPL55-202ENST00000336300 THBS3P49746 956 aa12.55□□□□□ -0.4
MRPL55-202ENST00000336300 SRSF4Q08170 494 aaKnown RBP12.55□□□□□ -0.4
MRPL55-202ENST00000336300 SLC35E3Q7Z769 313 aa12.55□□□□□ -0.4
MRPL55-202ENST00000336300 PDPNQ86YL7 162 aa12.55□□□□□ -0.4
MRPL55-202ENST00000336300 Q8N9W7 124 aa12.55□□□□□ -0.4
MRPL55-202ENST00000336300 OR5H2Q8NGV7 314 aa12.55□□□□□ -0.4
MRPL55-202ENST00000336300 GPX8Q8TED1 209 aa12.55□□□□□ -0.4
MRPL55-202ENST00000336300 FLYWCH2Q96CP2 140 aaKnown RBP12.55□□□□□ -0.4
MRPL55-202ENST00000336300 C6orf62Q9GZU0 229 aaPredicted RBP12.55□□□□□ -0.4
MRPL55-202ENST00000336300 PLSCR3Q9NRY6 295 aa12.55□□□□□ -0.4
MRPL55-202ENST00000336300 RABL2AQ9UBK7 228 aaPredicted RBP12.55□□□□□ -0.4
MRPL55-202ENST00000336300 RABL2BQ9UNT1 228 aa12.55□□□□□ -0.4
MRPL55-202ENST00000336300 M0QZ24 198 aa12.54□□□□□ -0.4
MRPL55-202ENST00000336300 ZNF701M0R085 212 aaPredicted RBP12.54□□□□□ -0.4
MRPL55-202ENST00000336300 CTDSP2O14595 271 aa12.54□□□□□ -0.4
MRPL55-202ENST00000336300 PROP1O75360 226 aa12.54□□□□□ -0.4
MRPL55-202ENST00000336300 RPS16P62249 146 aaKnown RBP12.54□□□□□ -0.4
MRPL55-202ENST00000336300 PLGLAQ15195 96 aa12.54□□□□□ -0.4
MRPL55-202ENST00000336300 RTL8BQ17RB0 113 aa12.54□□□□□ -0.4
MRPL55-202ENST00000336300 FAM71E2Q8N5Q1 922 aa12.54□□□□□ -0.4
MRPL55-202ENST00000336300 ZNF383Q8NA42 475 aa12.54□□□□□ -0.4
MRPL55-202ENST00000336300 NPBQ8NG41 125 aa12.54□□□□□ -0.4
MRPL55-202ENST00000336300 GIMAP1Q8WWP7 306 aa12.54□□□□□ -0.4
MRPL55-202ENST00000336300 SNAPC3Q92966 411 aa12.54□□□□□ -0.4
MRPL55-202ENST00000336300 TSNAXQ99598 290 aaKnown RBP12.54□□□□□ -0.4
MRPL55-202ENST00000336300 GON7Q9BXV9 100 aa12.54□□□□□ -0.4
MRPL55-202ENST00000336300 WNT10AQ9GZT5 417 aa12.54□□□□□ -0.4
MRPL55-202ENST00000336300 SLC35D1Q9NTN3 355 aa12.54□□□□□ -0.4
MRPL55-202ENST00000336300 EHFQ9NZC4 300 aa12.54□□□□□ -0.4
MRPL55-202ENST00000336300 TUSC2O75896 110 aa12.53□□□□□ -0.4
MRPL55-202ENST00000336300 IGHG2P01859 326 aa12.53□□□□□ -0.4
MRPL55-202ENST00000336300 PMP2P02689 132 aa12.53□□□□□ -0.4
MRPL55-202ENST00000336300 NAT1P18440 290 aa12.53□□□□□ -0.4
MRPL55-202ENST00000336300 RCVRNP35243 200 aa12.53□□□□□ -0.4
MRPL55-202ENST00000336300 KRTAP10-3P60369 221 aa12.53□□□□□ -0.4
MRPL55-202ENST00000336300 HERV-K104P61576 105 aa12.53□□□□□ -0.4
MRPL55-202ENST00000336300 SLC35B1P78383 322 aa12.53□□□□□ -0.4
MRPL55-202ENST00000336300 TMEM95Q3KNT9 176 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms