RNA–Protein interactions for RNA: ENST00000334258.9

SYNE3-201, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SYNE3, Length 3,275 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-201ENST00000334258 GBGT1Q8N5D6 347 aa11.68□□□□□ -0.54
SYNE3-201ENST00000334258 CISD2Q8N5K1 135 aaKnown RBP11.68□□□□□ -0.54
SYNE3-201ENST00000334258 SH3BGRL2Q9UJC5 107 aa11.68□□□□□ -0.54
SYNE3-201ENST00000334258 ZNF391Q9UJN7 358 aa11.68□□□□□ -0.54
SYNE3-201ENST00000334258 DOCK11Q5JSL3 2073 aa11.67□□□□□ -0.54
SYNE3-201ENST00000334258 C3orf80F5H4A9 247 aa11.67□□□□□ -0.54
SYNE3-201ENST00000334258 GALR2O43603 387 aaPredicted RBP11.67□□□□□ -0.54
SYNE3-201ENST00000334258 CCL2P13500 99 aa11.67□□□□□ -0.54
SYNE3-201ENST00000334258 DAZAP2Q15038 168 aaPredicted RBP11.67□□□□□ -0.54
SYNE3-201ENST00000334258 PMS2CLQ68D20 193 aa11.67□□□□□ -0.54
SYNE3-201ENST00000334258 C1orf210Q8IVY1 113 aa11.67□□□□□ -0.54
SYNE3-201ENST00000334258 OR10G9Q8NGN4 311 aa11.67□□□□□ -0.54
SYNE3-201ENST00000334258 OR10G7Q8NGN6 311 aa11.67□□□□□ -0.54
SYNE3-201ENST00000334258 AGMATQ9BSE5 352 aa11.67□□□□□ -0.54
SYNE3-201ENST00000334258 IGLV3-12A0A075B6K2 115 aa11.67□□□□□ -0.54
SYNE3-201ENST00000334258 TMEM250H0YL14 139 aa11.67□□□□□ -0.54
SYNE3-201ENST00000334258 EGR1P18146 543 aa11.67□□□□□ -0.54
SYNE3-201ENST00000334258 PRDX4Q13162 271 aa11.67□□□□□ -0.54
SYNE3-201ENST00000334258 C1orf194Q5T5A4 169 aa11.67□□□□□ -0.54
SYNE3-201ENST00000334258 FBXW9Q5XUX1 488 aa11.67□□□□□ -0.54
SYNE3-201ENST00000334258 TOMM20LQ6UXN7 152 aa11.67□□□□□ -0.54
SYNE3-201ENST00000334258 YRDCQ86U90 279 aaKnown RBP11.67□□□□□ -0.54
SYNE3-201ENST00000334258 SAP25Q8TEE9 199 aa11.67□□□□□ -0.54
SYNE3-201ENST00000334258 ZNF488Q96MN9 340 aa11.67□□□□□ -0.54
SYNE3-201ENST00000334258 RARRES3Q9UL19 164 aa11.67□□□□□ -0.54
SYNE3-201ENST00000334258 POLR3KQ9Y2Y1 108 aaPredicted RBP11.67□□□□□ -0.54
SYNE3-201ENST00000334258 IRF2P14316 349 aa11.66□□□□□ -0.54
SYNE3-201ENST00000334258 OR10J1P30954 320 aa11.66□□□□□ -0.54
SYNE3-201ENST00000334258 NTF4P34130 210 aa11.66□□□□□ -0.54
SYNE3-201ENST00000334258 PDLIM4P50479 330 aa11.66□□□□□ -0.54
SYNE3-201ENST00000334258 SOX8P57073 446 aa11.66□□□□□ -0.54
SYNE3-201ENST00000334258 FGF12P61328 243 aa11.66□□□□□ -0.54
SYNE3-201ENST00000334258 KMT5CQ86Y97 462 aa11.66□□□□□ -0.54
SYNE3-201ENST00000334258 TMEM105Q8N8V8 129 aa11.66□□□□□ -0.54
SYNE3-201ENST00000334258 ZNF709Q8N972 641 aa11.66□□□□□ -0.54
SYNE3-201ENST00000334258 PATZ1Q9HBE1 687 aaKnown RBP11.66□□□□□ -0.54
SYNE3-201ENST00000334258 PILRBQ9UKJ0 227 aa11.66□□□□□ -0.54
SYNE3-201ENST00000334258 PIGBOS1A0A0B4J2F0 54 aa11.66□□□□□ -0.54
SYNE3-201ENST00000334258 KIAA1324LA8MWY0 1029 aaPredicted RBP11.66□□□□□ -0.54
SYNE3-201ENST00000334258 ZIC3O60481 467 aa11.66□□□□□ -0.54
SYNE3-201ENST00000334258 CBR3O75828 277 aa11.66□□□□□ -0.54
SYNE3-201ENST00000334258 CD82P27701 267 aa11.66□□□□□ -0.54
SYNE3-201ENST00000334258 PCBD1P61457 104 aa11.66□□□□□ -0.54
SYNE3-201ENST00000334258 C20orf204Q6ZNR8 217 aa11.66□□□□□ -0.54
SYNE3-201ENST00000334258 C11orf42Q8N5U0 333 aa11.66□□□□□ -0.54
SYNE3-201ENST00000334258 FOXJ2Q9P0K8 574 aa11.66□□□□□ -0.54
SYNE3-201ENST00000334258 R4GN57 208 aa11.66□□□□□ -0.54
SYNE3-201ENST00000334258 IGHV5-10-1A0A0J9YXX1 117 aa11.66□□□□□ -0.54
SYNE3-201ENST00000334258 J3QW42 95 aa11.66□□□□□ -0.54
SYNE3-201ENST00000334258 RBMXL2O75526 392 aaKnown RBP11.66□□□□□ -0.54
SYNE3-201ENST00000334258 HPRT1P00492 218 aa11.66□□□□□ -0.54
SYNE3-201ENST00000334258 DEFA4P12838 97 aa11.66□□□□□ -0.54
SYNE3-201ENST00000334258 DSCR4P56555 118 aaPredicted RBP11.66□□□□□ -0.54
SYNE3-201ENST00000334258 ZXDAP98168 799 aa11.66□□□□□ -0.54
SYNE3-201ENST00000334258 MRPL21Q7Z2W9 205 aaKnown RBP11.66□□□□□ -0.54
SYNE3-201ENST00000334258 NEIL1Q96FI4 390 aaPredicted RBP11.66□□□□□ -0.54
SYNE3-201ENST00000334258 TECTBQ96PL2 329 aa11.66□□□□□ -0.54
SYNE3-201ENST00000334258 OR1A1Q9P1Q5 309 aa11.66□□□□□ -0.54
SYNE3-201ENST00000334258 C1QTNF9BB2RNN3 333 aa11.65□□□□□ -0.54
SYNE3-201ENST00000334258 CXCL13O43927 109 aa11.65□□□□□ -0.54
SYNE3-201ENST00000334258 CRYAAP02489 173 aa11.65□□□□□ -0.54
SYNE3-201ENST00000334258 LIFP15018 202 aa11.65□□□□□ -0.54
SYNE3-201ENST00000334258 IL3RAP26951 378 aa11.65□□□□□ -0.54
SYNE3-201ENST00000334258 UBE2G2P60604 165 aa11.65□□□□□ -0.54
SYNE3-201ENST00000334258 FFAR4Q5NUL3 377 aa11.65□□□□□ -0.54
SYNE3-201ENST00000334258 ACSM6Q6P461 480 aa11.65□□□□□ -0.54
SYNE3-201ENST00000334258 PCSK4Q6UW60 755 aa11.65□□□□□ -0.54
SYNE3-201ENST00000334258 UBALD2Q8IYN6 164 aa11.65□□□□□ -0.54
SYNE3-201ENST00000334258 ARRDC1-AS1Q9H2J1 176 aa11.65□□□□□ -0.54
SYNE3-201ENST00000334258 MTCH1Q9NZJ7 389 aa11.65□□□□□ -0.54
SYNE3-201ENST00000334258 DMXL2Q8TDJ6 3036 aa11.65□□□□□ -0.54
SYNE3-201ENST00000334258 LY6G6EA0A0G2JKS1 128 aa11.65□□□□□ -0.54
SYNE3-201ENST00000334258 CTXND1A0A1B0GTU2 59 aa11.65□□□□□ -0.54
SYNE3-201ENST00000334258 AQP7O14520 342 aa11.65□□□□□ -0.54
SYNE3-201ENST00000334258 IGKV1-5P01602 117 aa11.65□□□□□ -0.54
SYNE3-201ENST00000334258 SRP14P37108 136 aaKnown RBP11.65□□□□□ -0.54
SYNE3-201ENST00000334258 CDKN1BP46527 198 aa11.65□□□□□ -0.54
SYNE3-201ENST00000334258 PPP1CBP62140 327 aa11.65□□□□□ -0.54
SYNE3-201ENST00000334258 Q6ZS49 121 aa11.65□□□□□ -0.54
SYNE3-201ENST00000334258 OR1L6Q8NGR2 347 aa11.65□□□□□ -0.54
SYNE3-201ENST00000334258 IFI44Q8TCB0 444 aa11.65□□□□□ -0.54
SYNE3-201ENST00000334258 CPT1CQ8TCG5 803 aa11.65□□□□□ -0.54
SYNE3-201ENST00000334258 U3KQA8 63 aa11.65□□□□□ -0.54
SYNE3-201ENST00000334258 CACNA1DQ01668 2161 aa11.65□□□□□ -0.55
SYNE3-201ENST00000334258 GGCTO75223 188 aaKnown RBP11.64□□□□□ -0.55
SYNE3-201ENST00000334258 IGKV1-39P01597 117 aa11.64□□□□□ -0.55
SYNE3-201ENST00000334258 IGKV1D-39P04432 117 aa11.64□□□□□ -0.55
SYNE3-201ENST00000334258 VPS25Q9BRG1 176 aa11.64□□□□□ -0.55
SYNE3-201ENST00000334258 RNF24Q9Y225 148 aa11.64□□□□□ -0.55
SYNE3-201ENST00000334258 SVILO95425 2214 aa11.64□□□□□ -0.55
SYNE3-201ENST00000334258 GRIFINA4D1Z8 144 aa11.64□□□□□ -0.55
SYNE3-201ENST00000334258 FAM90A10PA6NDY2 464 aa11.64□□□□□ -0.55
SYNE3-201ENST00000334258 FAM90A18PA6NE21 464 aa11.64□□□□□ -0.55
SYNE3-201ENST00000334258 FAM90A16PA6NEW6 464 aa11.64□□□□□ -0.55
SYNE3-201ENST00000334258 FAM90A20PA6NIJ5 464 aa11.64□□□□□ -0.55
SYNE3-201ENST00000334258 FAM90A8PA6NJQ4 464 aa11.64□□□□□ -0.55
SYNE3-201ENST00000334258 FAM90A7PA6NKC0 464 aa11.64□□□□□ -0.55
SYNE3-201ENST00000334258 FAM90A22PA8MWA6 464 aa11.64□□□□□ -0.55
SYNE3-201ENST00000334258 FAM90A12PA8MX19 464 aa11.64□□□□□ -0.55
SYNE3-201ENST00000334258 FAM90A5PA8MXJ8 464 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 162.2 ms