RNA–Protein interactions for RNA: ENST00000300527.8

COL6A2-201, Transcript of collagen type VI alpha 2 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL6A2, Length 3,461 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-201ENST00000300527 SLC35B1P78383 322 aa12.42□□□□□ -0.42
COL6A2-201ENST00000300527 LTC4SQ16873 150 aa12.42□□□□□ -0.42
COL6A2-201ENST00000300527 NUFIP2Q7Z417 695 aaKnown RBP12.42□□□□□ -0.42
COL6A2-201ENST00000300527 OR10P1Q8NGE3 313 aa12.42□□□□□ -0.42
COL6A2-201ENST00000300527 A0A1W2PPV4 95 aa12.42□□□□□ -0.42
COL6A2-201ENST00000300527 F6UZH7 168 aa12.42□□□□□ -0.42
COL6A2-201ENST00000300527 TMEM250H0YL14 139 aa12.42□□□□□ -0.42
COL6A2-201ENST00000300527 SIAH2O43255 324 aa12.42□□□□□ -0.42
COL6A2-201ENST00000300527 RAMP3O60896 148 aa12.42□□□□□ -0.42
COL6A2-201ENST00000300527 SLC25A6P12236 298 aa12.42□□□□□ -0.42
COL6A2-201ENST00000300527 FOXG1P55316 489 aaPredicted RBP12.42□□□□□ -0.42
COL6A2-201ENST00000300527 C11orf42Q8N5U0 333 aa12.42□□□□□ -0.42
COL6A2-201ENST00000300527 OR10D3Q8NH80 312 aa12.42□□□□□ -0.42
COL6A2-201ENST00000300527 GPR35Q9HC97 309 aa12.42□□□□□ -0.42
COL6A2-201ENST00000300527 GGCTO75223 188 aaKnown RBP12.42□□□□□ -0.42
COL6A2-201ENST00000300527 CDC34P49427 236 aaPredicted RBP12.42□□□□□ -0.42
COL6A2-201ENST00000300527 SSR4P51571 173 aa12.42□□□□□ -0.42
COL6A2-201ENST00000300527 PCBD1P61457 104 aa12.42□□□□□ -0.42
COL6A2-201ENST00000300527 RAC1P63000 192 aa12.42□□□□□ -0.42
COL6A2-201ENST00000300527 ARF1P84077 181 aaKnown RBP12.42□□□□□ -0.42
COL6A2-201ENST00000300527 TRA2AQ13595 282 aaKnown RBP eCLIP12.42□□□□□ -0.42
COL6A2-201ENST00000300527 F2Z2F3 143 aa12.41□□□□□ -0.42
COL6A2-201ENST00000300527 SERF1AO75920 110 aa12.41□□□□□ -0.42
COL6A2-201ENST00000300527 CPT1CQ8TCG5 803 aa12.41□□□□□ -0.42
COL6A2-201ENST00000300527 FAM234AQ9H0X4 552 aa12.41□□□□□ -0.42
COL6A2-201ENST00000300527 LPAR2Q9HBW0 351 aa12.41□□□□□ -0.42
COL6A2-201ENST00000300527 OCIAD1Q9NX40 245 aa12.41□□□□□ -0.42
COL6A2-201ENST00000300527 CA6P23280 308 aa12.41□□□□□ -0.42
COL6A2-201ENST00000300527 SRP14P37108 136 aaKnown RBP12.41□□□□□ -0.42
COL6A2-201ENST00000300527 KIAA1644Q3SXP7 199 aa12.41□□□□□ -0.42
COL6A2-201ENST00000300527 DCAF10Q5QP82 559 aa12.41□□□□□ -0.42
COL6A2-201ENST00000300527 FOXL2NBQ6ZUU3 175 aa12.41□□□□□ -0.42
COL6A2-201ENST00000300527 Q6ZWC4 215 aa12.41□□□□□ -0.42
COL6A2-201ENST00000300527 OR1L1Q8NH94 360 aa12.41□□□□□ -0.42
COL6A2-201ENST00000300527 TRAV24A0A0B4J272 114 aa12.41□□□□□ -0.42
COL6A2-201ENST00000300527 RFPL3SP0C7P2 107 aa12.41□□□□□ -0.42
COL6A2-201ENST00000300527 CRISP2P16562 243 aa12.41□□□□□ -0.42
COL6A2-201ENST00000300527 GNB1P62873 340 aa12.41□□□□□ -0.42
COL6A2-201ENST00000300527 CCL7P80098 99 aa12.41□□□□□ -0.42
COL6A2-201ENST00000300527 ZNF585BQ52M93 769 aa12.41□□□□□ -0.42
COL6A2-201ENST00000300527 IFI44Q8TCB0 444 aa12.41□□□□□ -0.42
COL6A2-201ENST00000300527 WDYHV1Q96HA8 205 aa12.41□□□□□ -0.42
COL6A2-201ENST00000300527 OR2J1Q9GZK6 312 aa12.41□□□□□ -0.42
COL6A2-201ENST00000300527 DLL3Q9NYJ7 618 aa12.41□□□□□ -0.42
COL6A2-201ENST00000300527 TMEM210A6NLX4 147 aa12.4□□□□□ -0.42
COL6A2-201ENST00000300527 PMCHP20382 165 aa12.4□□□□□ -0.42
COL6A2-201ENST00000300527 TPPP2P59282 170 aa12.4□□□□□ -0.42
COL6A2-201ENST00000300527 HOXA4Q00056 320 aaPredicted RBP12.4□□□□□ -0.42
COL6A2-201ENST00000300527 LINC01551Q86U37 167 aa12.4□□□□□ -0.42
COL6A2-201ENST00000300527 RPS19BP1Q86WX3 136 aaKnown RBP12.4□□□□□ -0.42
COL6A2-201ENST00000300527 FAM58AQ8N1B3 248 aa12.4□□□□□ -0.42
COL6A2-201ENST00000300527 TMEM106BQ9NUM4 274 aa12.4□□□□□ -0.42
COL6A2-201ENST00000300527 LIN7CQ9NUP9 197 aaKnown RBP12.4□□□□□ -0.42
COL6A2-201ENST00000300527 AQP7O14520 342 aa12.4□□□□□ -0.42
COL6A2-201ENST00000300527 IER3P46695 156 aa12.4□□□□□ -0.42
COL6A2-201ENST00000300527 CEBPDP49716 269 aaPredicted RBP12.4□□□□□ -0.42
COL6A2-201ENST00000300527 PDLIM4P50479 330 aa12.4□□□□□ -0.42
COL6A2-201ENST00000300527 RAC3P60763 192 aa12.4□□□□□ -0.42
COL6A2-201ENST00000300527 AGMATQ9BSE5 352 aa12.4□□□□□ -0.42
COL6A2-201ENST00000300527 TMEM147Q9BVK8 224 aa12.4□□□□□ -0.42
COL6A2-201ENST00000300527 MRPL33O75394 65 aaKnown RBP12.39□□□□□ -0.43
COL6A2-201ENST00000300527 FRMD6-AS1P0C7T7 363 aa12.39□□□□□ -0.43
COL6A2-201ENST00000300527 Q6ZSR3 168 aa12.39□□□□□ -0.43
COL6A2-201ENST00000300527 DRAM1Q8N682 238 aa12.39□□□□□ -0.43
COL6A2-201ENST00000300527 R3HDM4Q96D70 268 aa12.39□□□□□ -0.43
COL6A2-201ENST00000300527 FOXJ2Q9P0K8 574 aa12.39□□□□□ -0.43
COL6A2-201ENST00000300527 PRRC2CQ9Y520 2896 aaKnown RBP12.39□□□□□ -0.43
COL6A2-201ENST00000300527 IGLV3-12A0A075B6K2 115 aa12.39□□□□□ -0.43
COL6A2-201ENST00000300527 RBFOX2O43251 390 aaKnown RBP eCLIP12.39□□□□□ -0.43
COL6A2-201ENST00000300527 FKBP2P26885 142 aaKnown RBP12.39□□□□□ -0.43
COL6A2-201ENST00000300527 TMEM183BQ1AE95 376 aa12.39□□□□□ -0.43
COL6A2-201ENST00000300527 Q6ZVH6 145 aa12.39□□□□□ -0.43
COL6A2-201ENST00000300527 ATOH7Q8N100 152 aa12.39□□□□□ -0.43
COL6A2-201ENST00000300527 TXN2Q99757 166 aa12.39□□□□□ -0.43
COL6A2-201ENST00000300527 FCN1O00602 326 aa12.39□□□□□ -0.43
COL6A2-201ENST00000300527 RELQ04864 619 aaPredicted RBP12.39□□□□□ -0.43
COL6A2-201ENST00000300527 MMDQ15546 238 aa12.39□□□□□ -0.43
COL6A2-201ENST00000300527 ZNF573Q86YE8 665 aa12.39□□□□□ -0.43
COL6A2-201ENST00000300527 OR5A2Q8NGI9 324 aa12.39□□□□□ -0.43
COL6A2-201ENST00000300527 CCDC74BQ96LY2 380 aa12.39□□□□□ -0.43
COL6A2-201ENST00000300527 PRRG4Q9BZD6 226 aa12.39□□□□□ -0.43
COL6A2-201ENST00000300527 OR2D2Q9H210 308 aa12.39□□□□□ -0.43
COL6A2-201ENST00000300527 DNAJC4Q9NNZ3 241 aa12.39□□□□□ -0.43
COL6A2-201ENST00000300527 DOCK10Q96BY6 2186 aa12.39□□□□□ -0.43
COL6A2-201ENST00000300527 DNAJC13O75165 2243 aa12.38□□□□□ -0.43
COL6A2-201ENST00000300527 NBEAQ8NFP9 2946 aa12.38□□□□□ -0.43
COL6A2-201ENST00000300527 KIR2DL5BA0A0G2JN68 375 aa12.38□□□□□ -0.43
COL6A2-201ENST00000300527 KIR2DL5BA0A0G2JPC4 375 aa12.38□□□□□ -0.43
COL6A2-201ENST00000300527 TFF1P04155 84 aa12.38□□□□□ -0.43
COL6A2-201ENST00000300527 P04436 131 aa12.38□□□□□ -0.43
COL6A2-201ENST00000300527 GDF1P27539 372 aa12.38□□□□□ -0.43
COL6A2-201ENST00000300527 KIR2DL5AQ8N109 375 aa12.38□□□□□ -0.43
COL6A2-201ENST00000300527 NPCDR1Q9BY65 106 aa12.38□□□□□ -0.43
COL6A2-201ENST00000300527 ATG2AQ2TAZ0 1938 aa12.38□□□□□ -0.43
COL6A2-201ENST00000300527 IGHV3-43A0A0B4J1X8 118 aa12.38□□□□□ -0.43
COL6A2-201ENST00000300527 ANKRD30BLA7E2S9 258 aa12.38□□□□□ -0.43
COL6A2-201ENST00000300527 DEFB108AA8MXU0 73 aa12.38□□□□□ -0.43
COL6A2-201ENST00000300527 IGHV3-43DP0DP04 118 aa12.38□□□□□ -0.43
COL6A2-201ENST00000300527 GNG10P50151 68 aa12.38□□□□□ -0.43
COL6A2-201ENST00000300527 TCL1AP56279 114 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms